RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 LRRC42Q9Y546 428 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 SFI1A8K8P3 1242 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 NAA20P61599 178 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 MAP3K10Q02779 954 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 CNGA2Q16280 664 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 TTC33Q6PID6 262 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 CLEC4GQ6UXB4 293 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 RIN2Q8WYP3 895 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 KCNB2Q92953 911 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 SUN2Q9UH99 717 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 LGALS16A8MUM7 142 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 GGPS1O95749 300 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 CXCR5P32302 372 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 TAB1Q15750 504 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 TCP11X2Q5H9J9 407 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 RNASE11Q8TAA1 199 aaKnown RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 GOLPH3LQ9H4A5 285 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 TNNC2P02585 160 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 ATP5BP06576 529 aaKnown RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 BRAFP15056 766 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 NCF2P19878 526 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 JADE1Q6IE81 842 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 NOSTRINQ8IVI9 506 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 USHBP1Q8N6Y0 703 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 KAT2BQ92831 832 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 ARHGEF1Q92888 912 aaKnown RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 LSG1Q9H089 658 aaKnown RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 WWP1Q9H0M0 922 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 CABP2Q9NPB3 220 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 HPS5Q9UPZ3 1129 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 PTPRKQ15262 1439 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 MROH1Q8NDA8 1641 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 ANKRD33BA6NCL7 494 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 WDR47O94967 919 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 PLCG2P16885 1265 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 SLC9A3P48764 834 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 S100ZQ8WXG8 99 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 CARD14Q9BXL6 1004 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 TEX13BQ9BXU2 312 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 TRIM10Q9UDY6 481 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 RPS6KL1Q9Y6S9 549 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 CFLARO15519 480 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 KLHL41O60662 606 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 FARP2O94887 1054 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 XRCC5P13010 732 aaKnown RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 GSPT1P15170 499 aaKnown RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 HOXD12P35452 270 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 ZFP1Q6P2D0 407 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 TRIM65Q6PJ69 517 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 LINC00301Q8NCQ3 95 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 BEGAINQ9BUH8 593 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 PRR12Q9ULL5 1215 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 PCDHGA4Q9Y5G9 962 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 M0QX08 132 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 GAS7O60861 476 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 PDE9AO76083 593 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 DHX34Q14147 1143 aaKnown RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 CDC42BPGQ6DT37 1551 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 PBXIP1Q96AQ6 731 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 A0A1W2PQC6 194 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 RAD51BO15315 384 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 PLEKHO1Q53GL0 409 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 PAPD7Q5XG87 772 aaKnown RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 TUBGCP2Q9BSJ2 902 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 LRRC2Q9BYS8 371 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 C20orf96Q9NUD7 363 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 DCDC2Q9UHG0 476 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 DAPK2Q9UIK4 370 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 ACSL3O95573 720 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 KRT31Q15323 416 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 TMED2Q15363 201 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 BTNL9Q6UXG8 535 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 RBM43Q6ZSC3 357 aaKnown RBP5.24□□□□□ -1.57
VPS13D-213ENST00000613099 TATDN2Q93075 761 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 PARVAQ9NVD7 372 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 DCTN4Q9UJW0 460 aa5.24□□□□□ -1.57
VPS13D-213ENST00000613099 C1orf232A0A0U1RR37 186 aa5.23□□□□□ -1.57
VPS13D-213ENST00000613099 GPC4O75487 556 aa5.23□□□□□ -1.57
VPS13D-213ENST00000613099 RAP1GAPP47736 663 aa5.23□□□□□ -1.57
VPS13D-213ENST00000613099 VCPP55072 806 aaKnown RBP5.23□□□□□ -1.57
VPS13D-213ENST00000613099 CNPY1Q3B7I2 92 aa5.23□□□□□ -1.57
VPS13D-213ENST00000613099 U2AF1L4Q8WU68 220 aaKnown RBP5.23□□□□□ -1.57
VPS13D-213ENST00000613099 MTERF3Q96E29 417 aa5.23□□□□□ -1.57
VPS13D-213ENST00000613099 ARMCX3Q9UH62 379 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-213ENST00000613099 ZBED4O75132 1171 aa5.23□□□□□ -1.57
VPS13D-213ENST00000613099 RTN2O75298 545 aa5.23□□□□□ -1.57
VPS13D-213ENST00000613099 PALMO75781 387 aa5.23□□□□□ -1.57
VPS13D-213ENST00000613099 MOCS3O95396 460 aa5.23□□□□□ -1.57
VPS13D-213ENST00000613099 TMPRSS15P98073 1019 aa5.23□□□□□ -1.57
VPS13D-213ENST00000613099 STAT4Q14765 748 aa5.23□□□□□ -1.57
VPS13D-213ENST00000613099 SPDYCQ5MJ68 293 aa5.23□□□□□ -1.57
VPS13D-213ENST00000613099 LRRC34Q8IZ02 419 aa5.23□□□□□ -1.57
VPS13D-213ENST00000613099 RBM17Q96I25 401 aaKnown RBP5.23□□□□□ -1.57
VPS13D-213ENST00000613099 MYRFQ9Y2G1 1151 aa5.23□□□□□ -1.57
VPS13D-213ENST00000613099 CACNA1SQ13698 1873 aa5.23□□□□□ -1.57
VPS13D-213ENST00000613099 PER1O15534 1290 aaPredicted RBP5.23□□□□□ -1.57
VPS13D-213ENST00000613099 ATP1A1P05023 1023 aaKnown RBP5.23□□□□□ -1.57
VPS13D-213ENST00000613099 CPA1P15085 419 aa5.23□□□□□ -1.57
VPS13D-213ENST00000613099 IL12AP29459 219 aa5.23□□□□□ -1.57
VPS13D-213ENST00000613099 MORF4L2Q15014 288 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms