RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 TCP11Q8WWU5 503 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 ZIC5Q96T25 663 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 DNAJC7Q99615 494 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 KIFC3Q9BVG8 833 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 EDEM3Q9BZQ6 932 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 MMRN2Q9H8L6 949 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 GJD2Q9UKL4 321 aa9.74□□□□□ -0.85
CCDC47-207ENST00000612558 IGKV6-21A0A0C4DH24 114 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 ZBTB42B2RXF5 422 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 MAPK13O15264 365 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 TNFAIP2Q03169 654 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 KCNMA1Q12791 1236 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 NOGQ13253 232 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 GRM1Q13255 1194 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 MXD4Q14582 209 aaPredicted RBP9.73□□□□□ -0.85
CCDC47-207ENST00000612558 DCAF17Q5H9S7 520 aaPredicted RBP9.73□□□□□ -0.85
CCDC47-207ENST00000612558 ZNF484Q5JVG2 852 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 TCERG1LQ5VWI1 586 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 E4F1Q66K89 784 aaPredicted RBP9.73□□□□□ -0.85
CCDC47-207ENST00000612558 CYP4F22Q6NT55 531 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 CYP26C1Q6V0L0 522 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 METTL3Q86U44 580 aaKnown RBP9.73□□□□□ -0.85
CCDC47-207ENST00000612558 TMTC1Q8IUR5 882 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 CCAR2Q8N163 923 aaKnown RBP9.73□□□□□ -0.85
CCDC47-207ENST00000612558 XXYLT1Q8NBI6 393 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 NEK11Q8NG66 645 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 OR6J1Q8NGC5 347 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 DEPTORQ8TB45 409 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 ASAP3Q8TDY4 903 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 SLC35C1Q96A29 364 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 CBWD1Q9BRT8 395 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 FAM207AQ9NSI2 230 aaPredicted RBP9.73□□□□□ -0.85
CCDC47-207ENST00000612558 AGPAT5Q9NUQ2 364 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 HSPBP1Q9NZL4 362 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 ADGRA3Q8IWK6 1321 aa9.73□□□□□ -0.85
CCDC47-207ENST00000612558 GTPBP10A4D1E9 387 aaKnown RBP9.72□□□□□ -0.85
CCDC47-207ENST00000612558 ANKRD63C9JTQ0 380 aa9.72□□□□□ -0.85
CCDC47-207ENST00000612558 K7ERI5 159 aa9.72□□□□□ -0.85
CCDC47-207ENST00000612558 AXIN1O15169 862 aa9.72□□□□□ -0.85
CCDC47-207ENST00000612558 HOXD8P13378 290 aaPredicted RBP9.72□□□□□ -0.85
CCDC47-207ENST00000612558 KRT13P13646 458 aa9.72□□□□□ -0.85
CCDC47-207ENST00000612558 CYP2B6P20813 491 aa9.72□□□□□ -0.85
CCDC47-207ENST00000612558 GARTP22102 1010 aa9.72□□□□□ -0.85
CCDC47-207ENST00000612558 STRN3Q13033 797 aa9.72□□□□□ -0.85
CCDC47-207ENST00000612558 DGKDQ16760 1214 aa9.72□□□□□ -0.85
CCDC47-207ENST00000612558 SMYD5Q6GMV2 418 aa9.72□□□□□ -0.85
CCDC47-207ENST00000612558 INTS8Q75QN2 995 aaKnown RBP9.72□□□□□ -0.85
CCDC47-207ENST00000612558 CCDC155Q8N6L0 562 aa9.72□□□□□ -0.85
CCDC47-207ENST00000612558 PRPF31Q8WWY3 499 aaKnown RBP9.72□□□□□ -0.85
CCDC47-207ENST00000612558 APBA2Q99767 749 aa9.72□□□□□ -0.85
CCDC47-207ENST00000612558 RNPEPQ9H4A4 650 aa9.72□□□□□ -0.85
CCDC47-207ENST00000612558 PCIF1Q9H4Z3 704 aa9.72□□□□□ -0.85
CCDC47-207ENST00000612558 SUGCTQ9HAC7 445 aa9.72□□□□□ -0.85
CCDC47-207ENST00000612558 ZNHIT6Q9NWK9 470 aaKnown RBP9.72□□□□□ -0.85
CCDC47-207ENST00000612558 FLRT1Q9NZU1 646 aa9.72□□□□□ -0.85
CCDC47-207ENST00000612558 ZNF215Q9UL58 517 aaPredicted RBP9.72□□□□□ -0.85
CCDC47-207ENST00000612558 LRRIQ4A6NIV6 560 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 TISP43B9A030 160 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 H3BRB1 525 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 HNRNPDLO14979 420 aaKnown RBP9.71□□□□□ -0.85
CCDC47-207ENST00000612558 MAGEB2O15479 319 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 ASAP2O43150 1006 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 ZBTB24O43167 697 aaPredicted RBP9.71□□□□□ -0.85
CCDC47-207ENST00000612558 ZSCAN12O43309 604 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 ADCY3O60266 1144 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 OFD1O75665 1012 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 AVPP01185 164 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 PIGRP01833 764 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 IGHA2P01877 340 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 MMP3P08254 477 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 ZNF865P0CJ78 1059 aaPredicted RBP9.71□□□□□ -0.85
CCDC47-207ENST00000612558 ADSSP30520 456 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 EFNA5P52803 228 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 FCGRTP55899 365 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 MCCD1P59942 119 aaPredicted RBP9.71□□□□□ -0.85
CCDC47-207ENST00000612558 BFSP1Q12934 665 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 MEA1Q16626 185 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 DEFB115Q30KQ5 88 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 PRAMEF19Q5SWL8 479 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 GBP6Q6ZN66 633 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 TAS1R3Q7RTX0 852 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 PSPC1Q8WXF1 523 aaKnown RBP9.71□□□□□ -0.85
CCDC47-207ENST00000612558 BICD1Q96G01 975 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 C16orf70Q9BSU1 422 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 CRACR2AQ9BSW2 395 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 LSM14BQ9BX40 385 aaKnown RBP9.71□□□□□ -0.85
CCDC47-207ENST00000612558 NUCKS1Q9H1E3 243 aaKnown RBP9.71□□□□□ -0.85
CCDC47-207ENST00000612558 TUT1Q9H6E5 874 aaKnown RBP9.71□□□□□ -0.85
CCDC47-207ENST00000612558 PLCB1Q9NQ66 1216 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 TRMT1Q9NXH9 659 aaKnown RBP9.71□□□□□ -0.85
CCDC47-207ENST00000612558 CEP72Q9P209 647 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 GNEQ9Y223 722 aaKnown RBP9.71□□□□□ -0.85
CCDC47-207ENST00000612558 COL1A2P08123 1366 aa9.71□□□□□ -0.85
CCDC47-207ENST00000612558 SOWAHDA6NJG2 315 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 A6NJR5 290 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 USP27XA6NNY8 438 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 KIAA0391O15091 583 aaKnown RBP9.71□□□□□ -0.86
CCDC47-207ENST00000612558 EPHB6O15197 1021 aa9.71□□□□□ -0.86
CCDC47-207ENST00000612558 DYNC1LI2O43237 492 aaPredicted RBP9.71□□□□□ -0.86
CCDC47-207ENST00000612558 INSRRP14616 1297 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms