RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 WNT7BP56706 349 aa15.22■□□□□ 0.03
PCDHGA3-202ENST00000612467 NNTQ13423 1086 aa15.22■□□□□ 0.03
PCDHGA3-202ENST00000612467 UAP1Q16222 522 aaPredicted RBP15.22■□□□□ 0.03
PCDHGA3-202ENST00000612467 SCARA3Q6AZY7 606 aa15.22■□□□□ 0.03
PCDHGA3-202ENST00000612467 MAATS1Q7Z4T9 603 aa15.22■□□□□ 0.03
PCDHGA3-202ENST00000612467 TATDN2Q93075 761 aa15.22■□□□□ 0.03
PCDHGA3-202ENST00000612467 TAF1DQ9H5J8 278 aaPredicted RBP15.22■□□□□ 0.03
PCDHGA3-202ENST00000612467 PLAAQ9Y263 795 aa15.22■□□□□ 0.03
PCDHGA3-202ENST00000612467 NCANO14594 1321 aa15.22■□□□□ 0.03
PCDHGA3-202ENST00000612467 MESDQ14696 234 aa15.22■□□□□ 0.03
PCDHGA3-202ENST00000612467 CCDC60Q8IWA6 550 aaPredicted RBP15.22■□□□□ 0.03
PCDHGA3-202ENST00000612467 C4orf19Q8IY42 314 aa15.22■□□□□ 0.03
PCDHGA3-202ENST00000612467 ZDHHC14Q8IZN3 488 aa15.22■□□□□ 0.03
PCDHGA3-202ENST00000612467 RNPC3Q96LT9 517 aaKnown RBP15.22■□□□□ 0.03
PCDHGA3-202ENST00000612467 ALG6Q9Y672 507 aa15.22■□□□□ 0.03
PCDHGA3-202ENST00000612467 A0A0A6YYK5 440 aaPredicted RBP15.21■□□□□ 0.03
PCDHGA3-202ENST00000612467 IRAK1P51617 712 aa15.21■□□□□ 0.03
PCDHGA3-202ENST00000612467 NCKAP1LP55160 1127 aa15.21■□□□□ 0.03
PCDHGA3-202ENST00000612467 GNGT1P63211 74 aa15.21■□□□□ 0.03
PCDHGA3-202ENST00000612467 TMEM132BQ14DG7 1078 aa15.21■□□□□ 0.03
PCDHGA3-202ENST00000612467 UBAP2Q5T6F2 1119 aaKnown RBP15.21■□□□□ 0.03
PCDHGA3-202ENST00000612467 ANGEL2Q5VTE6 544 aaKnown RBP15.21■□□□□ 0.03
PCDHGA3-202ENST00000612467 KMT5AQ9NQR1 393 aa15.21■□□□□ 0.03
PCDHGA3-202ENST00000612467 TCRBV7S2A1N4TA0A589 114 aa15.21■□□□□ 0.02
PCDHGA3-202ENST00000612467 BACE1P56817 501 aa15.21■□□□□ 0.02
PCDHGA3-202ENST00000612467 CEP85LQ5SZL2 805 aa15.21■□□□□ 0.02
PCDHGA3-202ENST00000612467 DAB2IPQ5VWQ8 1189 aa15.21■□□□□ 0.02
PCDHGA3-202ENST00000612467 NIPA1Q7RTP0 329 aa15.21■□□□□ 0.02
PCDHGA3-202ENST00000612467 NLRX1Q86UT6 975 aa15.21■□□□□ 0.02
PCDHGA3-202ENST00000612467 EPS8L1Q8TE68 723 aa15.21■□□□□ 0.02
PCDHGA3-202ENST00000612467 ISCUQ9H1K1 167 aa15.21■□□□□ 0.02
PCDHGA3-202ENST00000612467 SEPT9Q9UHD8 586 aaPredicted RBP15.21■□□□□ 0.02
PCDHGA3-202ENST00000612467 HSD17B3P37058 310 aa15.2■□□□□ 0.02
PCDHGA3-202ENST00000612467 SP2Q02086 613 aa15.2■□□□□ 0.02
PCDHGA3-202ENST00000612467 VSIG10LQ86VR7 867 aa15.2■□□□□ 0.02
PCDHGA3-202ENST00000612467 RASGEF1CQ8N431 466 aa15.2■□□□□ 0.02
PCDHGA3-202ENST00000612467 LMBR1Q8WVP7 490 aa15.2■□□□□ 0.02
PCDHGA3-202ENST00000612467 MOV10L1Q9BXT6 1211 aaKnown RBP15.2■□□□□ 0.02
PCDHGA3-202ENST00000612467 XPNPEP1Q9NQW7 623 aa15.2■□□□□ 0.02
PCDHGA3-202ENST00000612467 GRIN2DO15399 1336 aa15.2■□□□□ 0.02
PCDHGA3-202ENST00000612467 ANKRD62A6NC57 917 aa15.2■□□□□ 0.02
PCDHGA3-202ENST00000612467 PTPRAP18433 802 aa15.2■□□□□ 0.02
PCDHGA3-202ENST00000612467 ZNF280AP59817 542 aaPredicted RBP15.2■□□□□ 0.02
PCDHGA3-202ENST00000612467 GUCY1A3Q02108 690 aa15.2■□□□□ 0.02
PCDHGA3-202ENST00000612467 MTERF2Q49AM1 385 aa15.2■□□□□ 0.02
PCDHGA3-202ENST00000612467 SYCE1Q8N0S2 351 aa15.2■□□□□ 0.02
PCDHGA3-202ENST00000612467 TRPM4Q8TD43 1214 aa15.2■□□□□ 0.02
PCDHGA3-202ENST00000612467 POMGNT1Q8WZA1 660 aa15.2■□□□□ 0.02
PCDHGA3-202ENST00000612467 FAM213AQ9BRX8 229 aa15.2■□□□□ 0.02
PCDHGA3-202ENST00000612467 NOCTQ9UK39 431 aaKnown RBP15.2■□□□□ 0.02
PCDHGA3-202ENST00000612467 INTUQ9ULD6 942 aa15.2■□□□□ 0.02
PCDHGA3-202ENST00000612467 WDR81Q562E7 1941 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 KCNA2P16389 499 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 HPDP32754 393 aaPredicted RBP15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 IRX5P78411 483 aaPredicted RBP15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 DMP1Q13316 513 aaPredicted RBP15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 SEZ6Q53EL9 994 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 ALS2CLQ60I27 953 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 TAS1R3Q7RTX0 852 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 PARD3BQ8TEW8 1205 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 RUBCNQ92622 972 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 CAPS2Q9BXY5 557 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 TRIM7Q9C029 511 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 ZNF214Q9UL59 606 aaPredicted RBP15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 PCDHA10Q9Y5I2 948 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 ZNF541Q9H0D2 1346 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 ZNFX1Q9P2E3 1918 aaKnown RBP15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 OPA1O60313 960 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 ZEB2O60315 1214 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 STBD1O95210 358 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 LYPLA2O95372 231 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 COMTP21964 271 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 FMO1Q01740 532 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 TNFAIP1Q13829 316 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 SPOPLQ6IQ16 392 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 REPS2Q8NFH8 660 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 UBLCP1Q8WVY7 318 aaPredicted RBP15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 TMEM143Q96AN5 459 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 C18orf8Q96DM3 657 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 R3HDMLQ9H3Y0 253 aa15.19■□□□□ 0.02
PCDHGA3-202ENST00000612467 GOLGA8KD6RF30 607 aa15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 HNRNPDLO14979 420 aaKnown RBP15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 CCT5P48643 541 aa15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 CNTN2Q02246 1040 aa15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 GHRHRQ02643 423 aa15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 C10orf67Q8IYJ2 551 aa15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 ZNF280CQ8ND82 737 aa15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 CNKSR2Q8WXI2 1034 aa15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 ZBTB45Q96K62 511 aaPredicted RBP15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 A1CFQ9NQ94 594 aaKnown RBP15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 LOXHD1Q8IVV2 1947 aa15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 CES2O00748 559 aa15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 ANXA13P27216 316 aa15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 JAK3P52333 1124 aa15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 KRT76Q01546 638 aa15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 POU5F1Q01860 360 aaKnown RBP15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 PRKCEQ02156 737 aa15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 CETN1Q12798 172 aa15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 PPFIA1Q13136 1202 aa15.18■□□□□ 0.02
PCDHGA3-202ENST00000612467 ZBTB41Q5SVQ8 909 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms