RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 ITGB1P05556 798 aa28.67■■■□□ 2.18
VEGFA-226ENST00000611736 KRT18P05783 430 aaKnown RBP28.67■■■□□ 2.18
VEGFA-226ENST00000611736 PLS3P13797 630 aa28.67■■■□□ 2.18
VEGFA-226ENST00000611736 DDIT3P35638 169 aa28.67■■■□□ 2.18
VEGFA-226ENST00000611736 NAALADL2Q58DX5 795 aa28.67■■■□□ 2.18
VEGFA-226ENST00000611736 RNF39Q9H2S5 420 aa28.67■■■□□ 2.18
VEGFA-226ENST00000611736 NXF3Q9H4D5 531 aaKnown RBP28.67■■■□□ 2.18
VEGFA-226ENST00000611736 PDZD7Q9H5P4 517 aa28.67■■■□□ 2.18
VEGFA-226ENST00000611736 PRDM6Q9NQX0 595 aa28.67■■■□□ 2.18
VEGFA-226ENST00000611736 ARHGAP28Q9P2N2 729 aa28.67■■■□□ 2.18
VEGFA-226ENST00000611736 STK17AQ9UEE5 414 aa28.67■■■□□ 2.18
VEGFA-226ENST00000611736 SPTBN5Q9NRC6 3674 aaKnown RBP28.66■■■□□ 2.18
VEGFA-226ENST00000611736 N4BP3O15049 544 aa28.66■■■□□ 2.18
VEGFA-226ENST00000611736 PBX3P40426 434 aa28.66■■■□□ 2.18
VEGFA-226ENST00000611736 SKIV2LQ15477 1246 aaKnown RBP28.66■■■□□ 2.18
VEGFA-226ENST00000611736 ATL3Q6DD88 541 aa28.66■■■□□ 2.18
VEGFA-226ENST00000611736 THNSL1Q8IYQ7 743 aa28.66■■■□□ 2.18
VEGFA-226ENST00000611736 URGCPQ8TCY9 931 aa28.66■■■□□ 2.18
VEGFA-226ENST00000611736 KCNG4Q8TDN1 519 aa28.66■■■□□ 2.18
VEGFA-226ENST00000611736 CFAP45Q9UL16 551 aa28.66■■■□□ 2.18
VEGFA-226ENST00000611736 PHLPP2Q6ZVD8 1323 aa28.66■■■□□ 2.18
VEGFA-226ENST00000611736 A0A087X0B3 334 aa28.65■■■□□ 2.18
VEGFA-226ENST00000611736 CUTAO60888 179 aa28.65■■■□□ 2.18
VEGFA-226ENST00000611736 AFF1P51825 1210 aaKnown RBP28.65■■■□□ 2.18
VEGFA-226ENST00000611736 RNASELQ05823 741 aaKnown RBP28.65■■■□□ 2.18
VEGFA-226ENST00000611736 NT5DC1Q5TFE4 455 aa28.65■■■□□ 2.18
VEGFA-226ENST00000611736 CCDC73Q6ZRK6 1079 aa28.65■■■□□ 2.18
VEGFA-226ENST00000611736 HACE1Q8IYU2 909 aa28.65■■■□□ 2.18
VEGFA-226ENST00000611736 SPPL3Q8TCT6 385 aa28.65■■■□□ 2.18
VEGFA-226ENST00000611736 SPIRE2Q8WWL2 714 aa28.65■■■□□ 2.18
VEGFA-226ENST00000611736 RSPH1Q8WYR4 309 aa28.65■■■□□ 2.18
VEGFA-226ENST00000611736 ZNF558Q96NG5 402 aa28.65■■■□□ 2.18
VEGFA-226ENST00000611736 LMAN2LQ9H0V9 348 aa28.65■■■□□ 2.18
VEGFA-226ENST00000611736 TBC1D13Q9NVG8 400 aa28.65■■■□□ 2.18
VEGFA-226ENST00000611736 ODF2LQ9ULJ1 636 aa28.65■■■□□ 2.18
VEGFA-226ENST00000611736 RBM19Q9Y4C8 960 aaKnown RBP28.65■■■□□ 2.18
VEGFA-226ENST00000611736 PLXNA4Q9HCM2 1894 aa28.65■■■□□ 2.18
VEGFA-226ENST00000611736 ATG2AQ2TAZ0 1938 aa28.65■■■□□ 2.18
VEGFA-226ENST00000611736 FAM13AO94988 1023 aa28.64■■■□□ 2.18
VEGFA-226ENST00000611736 STAT6P42226 847 aa28.64■■■□□ 2.18
VEGFA-226ENST00000611736 SMTNP53814 917 aa28.64■■■□□ 2.18
VEGFA-226ENST00000611736 EEF1DP3Q658K8 133 aa28.64■■■□□ 2.18
VEGFA-226ENST00000611736 KCNT2Q6UVM3 1135 aa28.64■■■□□ 2.18
VEGFA-226ENST00000611736 TAS1R3Q7RTX0 852 aa28.64■■■□□ 2.18
VEGFA-226ENST00000611736 PDILTQ8N807 584 aa28.64■■■□□ 2.18
VEGFA-226ENST00000611736 GBP3Q9H0R5 595 aa28.64■■■□□ 2.18
VEGFA-226ENST00000611736 TMEM134Q9H6X4 195 aa28.64■■■□□ 2.18
VEGFA-226ENST00000611736 UBN1Q9NPG3 1134 aa28.64■■■□□ 2.18
VEGFA-226ENST00000611736 DLL1O00548 723 aa28.63■■■□□ 2.17
VEGFA-226ENST00000611736 ZC3H11AO75152 810 aaKnown RBP eCLIP28.63■■■□□ 2.17
VEGFA-226ENST00000611736 FGF18O76093 207 aa28.63■■■□□ 2.17
VEGFA-226ENST00000611736 AKAP5P24588 427 aa28.63■■■□□ 2.17
VEGFA-226ENST00000611736 DNAJB1P25685 340 aa28.63■■■□□ 2.17
VEGFA-226ENST00000611736 ME1P48163 572 aa28.63■■■□□ 2.17
VEGFA-226ENST00000611736 GIT2Q14161 759 aa28.63■■■□□ 2.17
VEGFA-226ENST00000611736 CSPP1Q1MSJ5 1256 aa28.63■■■□□ 2.17
VEGFA-226ENST00000611736 TIGD5Q53EQ6 642 aa28.63■■■□□ 2.17
VEGFA-226ENST00000611736 ATF7IP2Q5U623 682 aa28.63■■■□□ 2.17
VEGFA-226ENST00000611736 POF1BQ8WVV4 589 aa28.63■■■□□ 2.17
VEGFA-226ENST00000611736 CHAMP1Q96JM3 812 aa28.63■■■□□ 2.17
VEGFA-226ENST00000611736 GAD1Q99259 594 aa28.63■■■□□ 2.17
VEGFA-226ENST00000611736 ADPGKQ9BRR6 497 aa28.63■■■□□ 2.17
VEGFA-226ENST00000611736 ZHX3Q9H4I2 956 aa28.63■■■□□ 2.17
VEGFA-226ENST00000611736 LARSQ9P2J5 1176 aaKnown RBP28.63■■■□□ 2.17
VEGFA-226ENST00000611736 KCNG1Q9UIX4 513 aa28.63■■■□□ 2.17
VEGFA-226ENST00000611736 TBCAO75347 108 aaKnown RBP28.62■■■□□ 2.17
VEGFA-226ENST00000611736 POMCP01189 267 aa28.62■■■□□ 2.17
VEGFA-226ENST00000611736 MLH1P40692 756 aa28.62■■■□□ 2.17
VEGFA-226ENST00000611736 AXDND1Q5T1B0 1012 aaPredicted RBP28.62■■■□□ 2.17
VEGFA-226ENST00000611736 MYCT1Q8N699 235 aa28.62■■■□□ 2.17
VEGFA-226ENST00000611736 TMEM161BQ8NDZ6 487 aa28.62■■■□□ 2.17
VEGFA-226ENST00000611736 NTPCRQ9BSD7 190 aaKnown RBP28.62■■■□□ 2.17
VEGFA-226ENST00000611736 PARVGQ9HBI0 331 aa28.62■■■□□ 2.17
VEGFA-226ENST00000611736 PARP2Q9UGN5 583 aa28.62■■■□□ 2.17
VEGFA-226ENST00000611736 XIRP2A4UGR9 3374 aa28.62■■■□□ 2.17
VEGFA-226ENST00000611736 ARL5CA6NH57 179 aa28.61■■■□□ 2.17
VEGFA-226ENST00000611736 BCAR1P56945 870 aa28.61■■■□□ 2.17
VEGFA-226ENST00000611736 CAMK1Q14012 370 aa28.61■■■□□ 2.17
VEGFA-226ENST00000611736 SHC4Q6S5L8 630 aa28.61■■■□□ 2.17
VEGFA-226ENST00000611736 SV2BQ7L1I2 683 aa28.61■■■□□ 2.17
VEGFA-226ENST00000611736 DYMQ7RTS9 669 aa28.61■■■□□ 2.17
VEGFA-226ENST00000611736 ZFP42Q96MM3 310 aa28.61■■■□□ 2.17
VEGFA-226ENST00000611736 MRPL4Q9BYD3 311 aaKnown RBP28.61■■■□□ 2.17
VEGFA-226ENST00000611736 NRDE2Q9H7Z3 1164 aa28.61■■■□□ 2.17
VEGFA-226ENST00000611736 PCDHA7Q9UN72 937 aa28.61■■■□□ 2.17
VEGFA-226ENST00000611736 GIT1Q9Y2X7 761 aa28.61■■■□□ 2.17
VEGFA-226ENST00000611736 NT5C1B-RDH14C9J2C7 533 aa28.6■■■□□ 2.17
VEGFA-226ENST00000611736 MAPTP10636 758 aaKnown RBP28.6■■■□□ 2.17
VEGFA-226ENST00000611736 PPM1AP35813 382 aa28.6■■■□□ 2.17
VEGFA-226ENST00000611736 ZNF131P52739 623 aa28.6■■■□□ 2.17
VEGFA-226ENST00000611736 STRN3Q13033 797 aa28.6■■■□□ 2.17
VEGFA-226ENST00000611736 DCAF4L1Q3SXM0 396 aa28.6■■■□□ 2.17
VEGFA-226ENST00000611736 ZNF280BQ86YH2 543 aa28.6■■■□□ 2.17
VEGFA-226ENST00000611736 ACO2Q99798 780 aaKnown RBP28.6■■■□□ 2.17
VEGFA-226ENST00000611736 TARS2Q9BW92 718 aaKnown RBP28.6■■■□□ 2.17
VEGFA-226ENST00000611736 NSUN3Q9H649 340 aaKnown RBP28.6■■■□□ 2.17
VEGFA-226ENST00000611736 SPG21Q9NZD8 308 aa28.6■■■□□ 2.17
VEGFA-226ENST00000611736 KLK14Q9P0G3 267 aa28.6■■■□□ 2.17
VEGFA-226ENST00000611736 KANSL3Q9P2N6 904 aa28.6■■■□□ 2.17
VEGFA-226ENST00000611736 RCOR1Q9UKL0 485 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms