RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 CYP3A7-CYP3A51PA0A087WV96 503 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 RASSF10A6NK89 507 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 GOLGA8SH3BPF8 625 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 NOL4O94818 638 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 CYP3A7P24462 503 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 ATP11AP98196 1134 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 LMNB2Q03252 620 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 E2F5Q15329 346 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 TMED2Q15363 201 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 CIAPIN1Q6FI81 312 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 TMEM270Q6UE05 265 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 AMIGO3Q86WK7 504 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 MORC4Q8TE76 937 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 JPH2Q9BR39 696 aaPredicted RBP9.3□□□□□ -0.92
LIG4-204ENST00000611712 GPRC5CQ9NQ84 441 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 NRBP2Q9NSY0 501 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 ATF5Q9Y2D1 282 aaPredicted RBP9.3□□□□□ -0.92
LIG4-204ENST00000611712 PCDHA10Q9Y5I2 948 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 SIPA1L3O60292 1781 aaPredicted RBP9.3□□□□□ -0.92
LIG4-204ENST00000611712 A0A0A6YYK5 440 aaPredicted RBP9.3□□□□□ -0.92
LIG4-204ENST00000611712 SGK1O00141 431 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 CLDN3O15551 220 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 FAM107AO95990 144 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 KRT1P04264 644 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 SPATA31C1P0DKV0 1188 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 SCP2P22307 547 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 NAA25Q14CX7 972 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 LRRC14Q15048 493 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 ZNF394Q53GI3 561 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 HYIQ5T013 277 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 FYB2Q5VWT5 728 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 ZBTB8OSQ8IWT0 167 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 SLC20A1Q8WUM9 679 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 P3H4Q92791 437 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 TBC1D31Q96DN5 1066 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 RSRC1Q96IZ7 334 aaKnown RBP9.3□□□□□ -0.92
LIG4-204ENST00000611712 MSTO1Q9BUK6 570 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 IDI2Q9BXS1 227 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 PPP1R9AQ9ULJ8 1098 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 LRRD1A4D1F6 860 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 NKRFO15226 690 aaKnown RBP eCLIP9.3□□□□□ -0.92
LIG4-204ENST00000611712 STAM2O75886 525 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 GGPS1O95749 300 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 POLD1P28340 1107 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 HSPA9P38646 679 aaKnown RBP9.3□□□□□ -0.92
LIG4-204ENST00000611712 TFAMQ00059 246 aaKnown RBP9.3□□□□□ -0.92
LIG4-204ENST00000611712 KCTD19Q17RG1 926 aaPredicted RBP9.3□□□□□ -0.92
LIG4-204ENST00000611712 ZCWPW2Q504Y3 356 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 EPC2Q52LR7 807 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 TTMPQ5BVD1 217 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 AGBL2Q5U5Z8 902 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 SNRNP48Q6IEG0 339 aaKnown RBP9.3□□□□□ -0.92
LIG4-204ENST00000611712 FOXR2Q6PJQ5 311 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 CYFIP1Q7L576 1253 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 IRF2BP2Q7Z5L9 587 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 ZBTB33Q86T24 672 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 PALM2Q8IXS6 379 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 ETNPPLQ8TBG4 499 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 MYCBPAPQ8TBZ2 947 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 RNF25Q96BH1 459 aaPredicted RBP9.3□□□□□ -0.92
LIG4-204ENST00000611712 INPP4AQ96PE3 977 aaPredicted RBP9.3□□□□□ -0.92
LIG4-204ENST00000611712 PAGR1Q9BTK6 254 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 KIFC3Q9BVG8 833 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 TMBIM4Q9HC24 238 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 GINS2Q9Y248 185 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 TMX2Q9Y320 296 aa9.3□□□□□ -0.92
LIG4-204ENST00000611712 LCA5LO95447 670 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 SSTR3P32745 418 aaPredicted RBP9.29□□□□□ -0.92
LIG4-204ENST00000611712 IL9RQ01113 521 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 SLC29A2Q14542 456 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 HADHQ16836 314 aaKnown RBP9.29□□□□□ -0.92
LIG4-204ENST00000611712 DNAJC24Q6P3W2 148 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 NT5DC3Q86UY8 548 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 MDM1Q8TC05 714 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 ARHGEF2Q92974 986 aaKnown RBP9.29□□□□□ -0.92
LIG4-204ENST00000611712 CYFIP2Q96F07 1278 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 ATP6V0A4Q9HBG4 840 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 ZHX2Q9Y6X8 837 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 SGPL1O95470 568 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 PRKCIP41743 596 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 DYNLT1P63172 113 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 IRX3P78415 501 aaPredicted RBP9.29□□□□□ -0.92
LIG4-204ENST00000611712 KRT17Q04695 432 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 TRADDQ15628 312 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 CBWD6Q4V339 395 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 CBWD3Q5JTY5 395 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 CBWD5Q5RIA9 395 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 DACT2Q5SW24 774 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 RSBN1LQ6PCB5 846 aaPredicted RBP9.29□□□□□ -0.92
LIG4-204ENST00000611712 ARHGEF18Q6ZSZ5 1173 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 HAUS1Q96CS2 278 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 C18orf8Q96DM3 657 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 IKZF4Q9H2S9 585 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 UVRAGQ9P2Y5 699 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 ASTN1O14525 1302 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 EXOC1LA0A1B0GW35 172 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 TNNC2P02585 160 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 CHN1P15882 459 aa9.29□□□□□ -0.92
LIG4-204ENST00000611712 POLR2BP30876 1174 aaKnown RBP9.29□□□□□ -0.92
LIG4-204ENST00000611712 CIITAP33076 1130 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms