RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 USP17L15C9J2P7 530 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 USP17L13C9JLJ4 530 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 USP17L11C9JVI0 530 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 USP17L18D6R9N7 530 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 USP17L22D6RA61 530 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 USP17L17D6RBQ6 530 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 USP17L19D6RCP7 530 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 USP17L20D6RJB6 530 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 ZNF263O14978 683 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 PEX10O60683 326 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 PALMO75781 387 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 GFPT2O94808 682 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 CLTBP09497 229 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 POU3F3P20264 500 aaPredicted RBP8.24□□□□□ -1.09
LMBR1-221ENST00000609774 FNTAP49354 379 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 KLK7P49862 253 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 ATP1A2P50993 1020 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 TLE2Q04725 743 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 KLHL30Q0D2K2 578 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 USP17L24Q0WX57 530 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 LRRC41Q15345 812 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 CALCRLQ16602 461 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 ASTE1Q2TB18 679 aaPredicted RBP8.24□□□□□ -1.09
LMBR1-221ENST00000609774 LETM2Q2VYF4 491 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 FAM47AQ5JRC9 791 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 GJC2Q5T442 439 aaPredicted RBP8.24□□□□□ -1.09
LMBR1-221ENST00000609774 GKAP1Q5VSY0 366 aaPredicted RBP8.24□□□□□ -1.09
LMBR1-221ENST00000609774 PPP1R18Q6NYC8 613 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 ADGRA1Q86SQ6 560 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 ANKS4BQ8N8V4 417 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 GPATCH11Q8N954 259 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 MYCBPAPQ8TBZ2 947 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 ACTRT1Q8TDG2 376 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 HDAC7Q8WUI4 952 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 BAP1Q92560 729 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 LARP4BQ92615 738 aaKnown RBP8.24□□□□□ -1.09
LMBR1-221ENST00000609774 RAD54LQ92698 747 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 GPKOWQ92917 476 aaPredicted RBP eCLIP8.24□□□□□ -1.09
LMBR1-221ENST00000609774 TIFAQ96CG3 184 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 KRT12Q99456 494 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 GAS2L1Q99501 681 aaPredicted RBP8.24□□□□□ -1.09
LMBR1-221ENST00000609774 KIAA1683Q9H0B3 1180 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 NSRP1Q9H0G5 558 aaKnown RBP8.24□□□□□ -1.09
LMBR1-221ENST00000609774 RAB17Q9H0T7 212 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 GLT8D2Q9H1C3 349 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 TMEM60Q9H2L4 133 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 KLC4Q9NSK0 619 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 MCM9Q9NXL9 1143 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 AIPL1Q9NZN9 384 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 INTUQ9ULD6 942 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 ZBTB21Q9ULJ3 1066 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 TFR2Q9UP52 801 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 PLAAQ9Y263 795 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 DAAM1Q9Y4D1 1078 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 SAMM50Q9Y512 469 aa8.24□□□□□ -1.09
LMBR1-221ENST00000609774 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.24□□□□□ -1.09
LMBR1-221ENST00000609774 ZNFX1Q9P2E3 1918 aaKnown RBP8.24□□□□□ -1.09
LMBR1-221ENST00000609774 BAZ2AQ9UIF9 1905 aaKnown RBP8.24□□□□□ -1.09
LMBR1-221ENST00000609774 GOLGA6L10A0A0M3HER8 536 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 PALM3A6NDB9 673 aaPredicted RBP8.23□□□□□ -1.09
LMBR1-221ENST00000609774 SMCO2A6NFE2 343 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 ANKRD65E5RJM6 399 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 PGRMC1O00264 195 aaKnown RBP8.23□□□□□ -1.09
LMBR1-221ENST00000609774 MARCH6O60337 910 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 FLOT1O75955 427 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 PAEPP09466 180 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 GCFC2P16383 781 aaKnown RBP8.23□□□□□ -1.09
LMBR1-221ENST00000609774 CTNNA1P35221 906 aaKnown RBP8.23□□□□□ -1.09
LMBR1-221ENST00000609774 TECP42680 631 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 SLC1A4P43007 532 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 CARSP49589 748 aaKnown RBP8.23□□□□□ -1.09
LMBR1-221ENST00000609774 NPEPPSP55786 919 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 MARSP56192 900 aaKnown RBP8.23□□□□□ -1.09
LMBR1-221ENST00000609774 PPP2R2AP63151 447 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 LMNB2Q03252 620 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 FPGSQ05932 587 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 GFPT1Q06210 699 aaPredicted RBP8.23□□□□□ -1.09
LMBR1-221ENST00000609774 ITGB3BPQ13352 177 aaPredicted RBP8.23□□□□□ -1.09
LMBR1-221ENST00000609774 SLMAPQ14BN4 828 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 KIAA0753Q2KHM9 967 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 FAM83BQ5T0W9 1011 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 C12orf60Q5U649 245 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 FBXW10Q5XX13 1052 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 TATDN1Q6P1N9 297 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 REXO1Q8N1G1 1221 aaKnown RBP8.23□□□□□ -1.09
LMBR1-221ENST00000609774 CCHCR1Q8TD31 782 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 TATDN2Q93075 761 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 CENPTQ96BT3 561 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 PLIN2Q99541 437 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 TSEN34Q9BSV6 310 aaKnown RBP8.23□□□□□ -1.09
LMBR1-221ENST00000609774 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.23□□□□□ -1.09
LMBR1-221ENST00000609774 LSM14BQ9BX40 385 aaKnown RBP8.23□□□□□ -1.09
LMBR1-221ENST00000609774 KDM4CQ9H3R0 1056 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 SLC39A2Q9NP94 309 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 MAD2L2Q9UI95 211 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 UTP11Q9Y3A2 253 aaKnown RBP8.23□□□□□ -1.09
LMBR1-221ENST00000609774 IVNS1ABPQ9Y6Y0 642 aa8.23□□□□□ -1.09
LMBR1-221ENST00000609774 TRANK1O15050 2925 aa8.22□□□□□ -1.09
LMBR1-221ENST00000609774 CYP2D7A0A087X1C5 515 aa8.22□□□□□ -1.09
LMBR1-221ENST00000609774 A0A0A6YYK5 440 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms