RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 BAG2O95816 211 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 BRAFP15056 766 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 FOXN2P32314 431 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 RFX5P48382 616 aaPredicted RBP13.43□□□□□ -0.26
CTCFL-218ENST00000608440 KLRC3Q07444 240 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 DNAJC3Q13217 504 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 EXOC3L4Q17RC7 722 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 LRRC36Q1X8D7 754 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 FNBP1Q96RU3 617 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 TANGO6Q9C0B7 1094 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 EBF3Q9H4W6 596 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 PTTG2Q9NZH5 202 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 STX18Q9P2W9 335 aaKnown RBP13.43□□□□□ -0.26
CTCFL-218ENST00000608440 TBC1D30Q9Y2I9 924 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 TJP1Q07157 1748 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 THSD7AQ9UPZ6 1657 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 ZNF862O60290 1169 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 FGGP02679 453 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 MCM7P33993 719 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 RGS2P41220 211 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 DR1Q01658 176 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 ACVR2BQ13705 512 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 CCDC174Q6PII3 467 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 B3GNT6Q6ZMB0 384 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 ZSCAN29Q8IWY8 852 aaPredicted RBP13.43□□□□□ -0.26
CTCFL-218ENST00000608440 IQCF2Q8IXL9 164 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 SEC14L1Q92503 715 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 P2RX5Q93086 422 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 SNX27Q96L92 541 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 SYNCQ9H7C4 482 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 SLCO1B3Q9NPD5 702 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 DDX43Q9NXZ2 648 aaKnown RBP13.43□□□□□ -0.26
CTCFL-218ENST00000608440 IL1RAPL1Q9NZN1 696 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 TBK1Q9UHD2 729 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 UMODL1Q5DID0 1318 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 NUP188Q5SRE5 1749 aa13.43□□□□□ -0.26
CTCFL-218ENST00000608440 GPAA1O43292 621 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 TLR2O60603 784 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 STK10O94804 968 aaKnown RBP13.42□□□□□ -0.26
CTCFL-218ENST00000608440 YARSP54577 528 aaKnown RBP13.42□□□□□ -0.26
CTCFL-218ENST00000608440 KCNQ4P56696 695 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 ITPK1Q13572 414 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 IL17AQ16552 155 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 RC3H1Q5TC82 1133 aaKnown RBP13.42□□□□□ -0.26
CTCFL-218ENST00000608440 ARHGAP27Q6ZUM4 889 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 DIS3LQ8TF46 1054 aaKnown RBP13.42□□□□□ -0.26
CTCFL-218ENST00000608440 HPS3Q969F9 1004 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 SHISA4Q96DD7 197 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 CDK5RAP3Q96JB5 506 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 ECSITQ9BQ95 431 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 ERP44Q9BS26 406 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 NAPBQ9H115 298 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 DDX25Q9UHL0 483 aaKnown RBP13.42□□□□□ -0.26
CTCFL-218ENST00000608440 TRPC5Q9UL62 973 aaPredicted RBP13.42□□□□□ -0.26
CTCFL-218ENST00000608440 AFDNP55196 1824 aaKnown RBP13.42□□□□□ -0.26
CTCFL-218ENST00000608440 ATRNO75882 1429 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 SSU72P8A0A1W2PR75 194 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 EXOC3O60645 756 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 TAC1P20366 129 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 RTN1Q16799 776 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 TTC38Q5R3I4 469 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 LMBRD2Q68DH5 695 aaPredicted RBP13.42□□□□□ -0.26
CTCFL-218ENST00000608440 TMEM214Q6NUQ4 689 aaKnown RBP13.42□□□□□ -0.26
CTCFL-218ENST00000608440 MCUR1Q96AQ8 359 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 DGCR14Q96DF8 476 aaKnown RBP13.42□□□□□ -0.26
CTCFL-218ENST00000608440 TTC1Q99614 292 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 AIPL1Q9NZN9 384 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 ZNF212Q9UDV6 495 aa13.42□□□□□ -0.26
CTCFL-218ENST00000608440 VILLO15195 856 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 RIPK2O43353 540 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 PRPF3O43395 683 aaKnown RBP13.41□□□□□ -0.26
CTCFL-218ENST00000608440 DEXIO95424 95 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 ACSL3O95573 720 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 EYA4O95677 639 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 PDGFRBP09619 1106 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 SERPINB8P50452 374 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 NAA20P61599 178 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 TBL3Q12788 808 aaKnown RBP13.41□□□□□ -0.26
CTCFL-218ENST00000608440 SPDYCQ5MJ68 293 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 ZDHHC24Q6UX98 284 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 PEX26Q7Z412 305 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 OGFOD1Q8N543 542 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 RIN3Q8TB24 985 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 FNDC8Q8TC99 324 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 U2AF1L4Q8WU68 220 aaKnown RBP13.41□□□□□ -0.26
CTCFL-218ENST00000608440 CCDC28BQ9BUN5 200 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 METTL14Q9HCE5 456 aaKnown RBP13.41□□□□□ -0.26
CTCFL-218ENST00000608440 FAIMQ9NVQ4 179 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 ARPP21Q9UBL0 812 aaPredicted RBP13.41□□□□□ -0.26
CTCFL-218ENST00000608440 PP2D1A8MPX8 630 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 USP1O94782 785 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 AMPD1P23109 780 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 GTF2H1P32780 548 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 PDE1BQ01064 536 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 KIF22Q14807 665 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 DUPD1Q68J44 220 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 MYOCDQ8IZQ8 938 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 VPS52Q8N1B4 723 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 USP29Q9HBJ7 922 aa13.41□□□□□ -0.26
CTCFL-218ENST00000608440 ZFP69BQ9UJL9 534 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms