RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 NRKQ7Z2Y5 1582 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 ANKRD65E5RJM6 399 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 KRT17Q04695 432 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 TRADDQ15628 312 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 RTKN2Q8IZC4 609 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 SYN2Q92777 582 aaPredicted RBP22.36■■□□□ 1.17
SH3D19-211ENST00000604030 SLC13A4Q9UKG4 626 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 SUGT1Q9Y2Z0 365 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 SPDYE2BA6NHP3 402 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 SPDYE6P0CI01 402 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 SRGAP2CP0DJJ0 459 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 HP1BP3Q5SSJ5 553 aaPredicted RBP22.36■■□□□ 1.17
SH3D19-211ENST00000604030 GPD1LQ8N335 351 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 NSUN6Q8TEA1 469 aaKnown RBP22.36■■□□□ 1.17
SH3D19-211ENST00000604030 OSBPL1AQ9BXW6 950 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 YIPF3Q9GZM5 350 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 USP15Q9Y4E8 981 aaPredicted RBP22.36■■□□□ 1.17
SH3D19-211ENST00000604030 CROCC2H7BZ55 1655 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 TBX3O15119 743 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 CYP2D6P10635 497 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 STAT3P40763 770 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 DSTYKQ6XUX3 929 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 RCOR2Q8IZ40 523 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 SLC8A2Q9UPR5 921 aa22.36■■□□□ 1.17
SH3D19-211ENST00000604030 HPCAL4Q9UM19 191 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 SPAG6O75602 509 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 GH2P01242 217 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 NCAPHQ15003 741 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 MTHFD1LQ6UB35 978 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 BEST2Q8NFU1 509 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 DPF2Q92785 391 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 DCTN4Q9UJW0 460 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 USP31Q70CQ4 1352 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 PIK3R2O00459 728 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 SNX2O60749 519 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 ACTN3Q08043 901 aaPredicted RBP22.35■■□□□ 1.17
SH3D19-211ENST00000604030 HIF1AQ16665 826 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 CEP95Q96GE4 821 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 RMDN3Q96TC7 470 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 WDR35Q9P2L0 1181 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 PSMC1P62191 440 aaKnown RBP22.35■■□□□ 1.17
SH3D19-211ENST00000604030 HIPK4Q8NE63 616 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 FAM213AQ9BRX8 229 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 SMYD3Q9H7B4 428 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 AMACRQ9UHK6 382 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 PPME1Q9Y570 386 aa22.35■■□□□ 1.17
SH3D19-211ENST00000604030 SYCE1LA8MT33 242 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 OSTNP61366 133 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 GUCY1A3Q02108 690 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 HIC1Q14526 733 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 ARHGEF6Q15052 776 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 APLFQ8IW19 511 aaPredicted RBP22.34■■□□□ 1.17
SH3D19-211ENST00000604030 FSD1LQ9BXM9 530 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 GTSE1Q9NYZ3 720 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 SCHIP1Q9P0W5 487 aaPredicted RBP22.34■■□□□ 1.17
SH3D19-211ENST00000604030 ZNF212Q9UDV6 495 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 RNF103-CHMP3A0A140T963 221 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 SLC16A4O15374 487 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 E2F6O75461 281 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 AARSP49588 968 aaKnown RBP eCLIP22.34■■□□□ 1.17
SH3D19-211ENST00000604030 RYBPQ8N488 228 aaPredicted RBP22.34■■□□□ 1.17
SH3D19-211ENST00000604030 SH3GL3Q99963 347 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 TRABDQ9H4I3 376 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 LRRC7Q96NW7 1537 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 TSTA3Q13630 321 aaPredicted RBP22.34■■□□□ 1.17
SH3D19-211ENST00000604030 C16orf87Q6PH81 154 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 NLRP4Q96MN2 994 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 ACAP3Q96P50 834 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 PDS5AQ29RF7 1337 aaKnown RBP22.34■■□□□ 1.17
SH3D19-211ENST00000604030 CCND1P24385 295 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 SERPINB9P50453 376 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 THNSL1Q8IYQ7 743 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 RANBP17Q9H2T7 1088 aaKnown RBP22.34■■□□□ 1.17
SH3D19-211ENST00000604030 H3BRJ5 948 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 LCA5Q86VQ0 697 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 THEM5Q8N1Q8 247 aa22.34■■□□□ 1.17
SH3D19-211ENST00000604030 MRPL4Q9BYD3 311 aaKnown RBP22.34■■□□□ 1.17
SH3D19-211ENST00000604030 WARS2Q9UGM6 360 aaKnown RBP22.34■■□□□ 1.17
SH3D19-211ENST00000604030 SNRPFP62306 86 aaKnown RBP22.33■■□□□ 1.17
SH3D19-211ENST00000604030 MTF1Q14872 753 aa22.33■■□□□ 1.17
SH3D19-211ENST00000604030 TC2NQ8N9U0 490 aa22.33■■□□□ 1.17
SH3D19-211ENST00000604030 DIAPH2O60879 1101 aa22.33■■□□□ 1.17
SH3D19-211ENST00000604030 NAB2Q15742 525 aa22.33■■□□□ 1.17
SH3D19-211ENST00000604030 CATSPER4Q7RTX7 472 aa22.33■■□□□ 1.17
SH3D19-211ENST00000604030 XPO6Q96QU8 1125 aaKnown RBP22.33■■□□□ 1.17
SH3D19-211ENST00000604030 HOXC10Q9NYD6 342 aa22.33■■□□□ 1.17
SH3D19-211ENST00000604030 PNMA3Q9UL41 463 aa22.33■■□□□ 1.17
SH3D19-211ENST00000604030 TARBP1Q13395 1621 aaKnown RBP22.33■■□□□ 1.17
SH3D19-211ENST00000604030 POTEFA5A3E0 1075 aa22.33■■□□□ 1.16
SH3D19-211ENST00000604030 USP17L15C9J2P7 530 aa22.33■■□□□ 1.16
SH3D19-211ENST00000604030 USP17L13C9JLJ4 530 aa22.33■■□□□ 1.16
SH3D19-211ENST00000604030 USP17L11C9JVI0 530 aa22.33■■□□□ 1.16
SH3D19-211ENST00000604030 USP17L18D6R9N7 530 aa22.33■■□□□ 1.16
SH3D19-211ENST00000604030 USP17L22D6RA61 530 aa22.33■■□□□ 1.16
SH3D19-211ENST00000604030 USP17L17D6RBQ6 530 aa22.33■■□□□ 1.16
SH3D19-211ENST00000604030 USP17L19D6RCP7 530 aa22.33■■□□□ 1.16
SH3D19-211ENST00000604030 USP17L20D6RJB6 530 aa22.33■■□□□ 1.16
SH3D19-211ENST00000604030 POTEIP0CG38 1075 aa22.33■■□□□ 1.16
SH3D19-211ENST00000604030 PRDX5P30044 214 aa22.33■■□□□ 1.16
SH3D19-211ENST00000604030 CRKP46108 304 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms