RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 FAM187BQ17R55 369 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 BMT2Q1RMZ1 405 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 KMT5BQ4FZB7 885 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 CNKSR3Q6P9H4 555 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 MAEAQ7L5Y9 396 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 ZNF720Q7Z2F6 126 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 SRGAP1Q7Z6B7 1085 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 SFR1Q86XK3 245 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 FAM178BQ8IXR5 827 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 RNF149Q8NC42 400 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 TMEM161BQ8NDZ6 487 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 CELF4Q9BZC1 486 aaKnown RBP12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 OSBPL7Q9BZF2 842 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 INO80BQ9C086 356 aaPredicted RBP12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 FAM49AQ9H0Q0 323 aaPredicted RBP12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 IFT122Q9HBG6 1241 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 EXOC1Q9NV70 894 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 TRPV2Q9Y5S1 764 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 COL4A6Q14031 1691 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 UBE4BO95155 1302 aa12.82□□□□□ -0.36
CHMP2A-207ENST00000600804 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 SFI1A8K8P3 1242 aa12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 M0QZ92 97 aa12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 EIF3DO15371 548 aaKnown RBP eCLIP12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 GPR37L1O60883 481 aa12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 CHRNA1P02708 482 aa12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 DARSP14868 501 aaKnown RBP12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 IL9P15248 144 aa12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 EIF4BP23588 611 aaKnown RBP12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 THPOP40225 353 aa12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 PPP1R2P41236 205 aa12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 KCNJ6P48051 423 aa12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 ERVK-21P61565 698 aa12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 MORC3Q14149 939 aa12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 CT47A1Q5JQC4 288 aaPredicted RBP12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 TMEM31Q5JXX7 168 aa12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 CAVIN1Q6NZI2 390 aaKnown RBP12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.81□□□□□ -0.367e-9■■■■□ 26.5
CHMP2A-207ENST00000600804 STXBP4Q6ZWJ1 553 aa12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 EPM2AIP1Q7L775 607 aaPredicted RBP12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 ZBTB8OSQ8IWT0 167 aa12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 PRIMPOLQ96LW4 560 aa12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 GCOM2Q9BZD3 368 aaPredicted RBP12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 FZD8Q9H461 694 aa12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 MRPL44Q9H9J2 332 aaKnown RBP12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 KMT5AQ9NQR1 393 aa12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 MAN1B1Q9UKM7 699 aa12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 PCDHB13Q9Y5F0 798 aa12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 ADGRA3Q8IWK6 1321 aa12.81□□□□□ -0.36
CHMP2A-207ENST00000600804 A0A087WZ62 844 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 LRRIQ4A6NIV6 560 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 PI4K2BG5E9Z4 385 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 KIF20AO95235 890 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 SRGAP2CP0DJJ0 459 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 MBTD1Q05BQ5 628 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 STK4Q13043 487 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 KIZQ2M2Z5 673 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 ZNF618Q5T7W0 954 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 ZNF658Q5TYW1 1059 aaPredicted RBP12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 FAM117BQ6P1L5 589 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 FOXR2Q6PJQ5 311 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 HAUS6Q7Z4H7 955 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 KSR1Q8IVT5 923 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 KIAA0895Q8NCT3 520 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 DEPTORQ8TB45 409 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 ZNF507Q8TCN5 953 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 NLRP7Q8WX94 980 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 NLRP4Q96MN2 994 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 FDXACB1Q9BRP7 624 aaPredicted RBP12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 C17orf80Q9BSJ5 609 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 CCDC113Q9H0I3 377 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 ZHX3Q9H4I2 956 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 UBE2ZQ9H832 354 aaPredicted RBP12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 LMCD1Q9NZU5 365 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 ARIH1Q9Y4X5 557 aaPredicted RBP12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 CDY2AQ9Y6F7 541 aa12.8□□□□□ -0.36
CHMP2A-207ENST00000600804 MYO15AQ9UKN7 3530 aa12.79□□□□□ -0.36
CHMP2A-207ENST00000600804 PLXNA4Q9HCM2 1894 aa12.79□□□□□ -0.36
CHMP2A-207ENST00000600804 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.79□□□□□ -0.36
CHMP2A-207ENST00000600804 CCDC169A6NNP5 214 aa12.79□□□□□ -0.36
CHMP2A-207ENST00000600804 ACKR2O00590 384 aa12.79□□□□□ -0.36
CHMP2A-207ENST00000600804 PIGRP01833 764 aa12.79□□□□□ -0.36
CHMP2A-207ENST00000600804 SNRPFP62306 86 aaKnown RBP12.79□□□□□ -0.36
CHMP2A-207ENST00000600804 FBXO47Q5MNV8 452 aa12.79□□□□□ -0.36
CHMP2A-207ENST00000600804 MAP4K3Q8IVH8 894 aa12.79□□□□□ -0.36
CHMP2A-207ENST00000600804 GUF1Q8N442 669 aaKnown RBP12.79□□□□□ -0.36
CHMP2A-207ENST00000600804 TMEM174Q8WUU8 243 aa12.79□□□□□ -0.36
CHMP2A-207ENST00000600804 POLD4Q9HCU8 107 aa12.79□□□□□ -0.36
CHMP2A-207ENST00000600804 PRMT7Q9NVM4 692 aaPredicted RBP12.79□□□□□ -0.36
CHMP2A-207ENST00000600804 DMDP11532 3685 aa12.79□□□□□ -0.36
CHMP2A-207ENST00000600804 TECTAO75443 2155 aa12.79□□□□□ -0.36
CHMP2A-207ENST00000600804 DENND3A2RUS2 1198 aa12.78□□□□□ -0.36
CHMP2A-207ENST00000600804 K7ENM7 598 aa12.78□□□□□ -0.36
CHMP2A-207ENST00000600804 K7ERI5 159 aa12.78□□□□□ -0.36
CHMP2A-207ENST00000600804 SLC16A4O15374 487 aa12.78□□□□□ -0.36
CHMP2A-207ENST00000600804 GCNT3O95395 438 aa12.78□□□□□ -0.36
CHMP2A-207ENST00000600804 BMP6P22004 513 aa12.78□□□□□ -0.36
CHMP2A-207ENST00000600804 SFPQP23246 707 aaKnown RBP eCLIP12.78□□□□□ -0.36
CHMP2A-207ENST00000600804 NMT1P30419 496 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms