RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 TMC7Q7Z402 723 aa24.95■■□□□ 1.58
CCDC9-204ENST00000599398 ZNF280BQ86YH2 543 aa24.95■■□□□ 1.58
CCDC9-204ENST00000599398 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.95■■□□□ 1.58
CCDC9-204ENST00000599398 AK8Q96MA6 479 aa24.95■■□□□ 1.58
CCDC9-204ENST00000599398 NXF3Q9H4D5 531 aaKnown RBP24.95■■□□□ 1.58
CCDC9-204ENST00000599398 DNAJB4Q9UDY4 337 aa24.95■■□□□ 1.58
CCDC9-204ENST00000599398 CARNS1A5YM72 827 aa24.94■■□□□ 1.58
CCDC9-204ENST00000599398 TNFRSF10AO00220 468 aa24.94■■□□□ 1.58
CCDC9-204ENST00000599398 FSCN2O14926 492 aa24.94■■□□□ 1.58
CCDC9-204ENST00000599398 PER2O15055 1255 aa24.94■■□□□ 1.58
CCDC9-204ENST00000599398 HIP1RO75146 1068 aa24.94■■□□□ 1.58
CCDC9-204ENST00000599398 LTBRP36941 435 aa24.94■■□□□ 1.58
CCDC9-204ENST00000599398 MLH1P40692 756 aa24.94■■□□□ 1.58
CCDC9-204ENST00000599398 UBA7P41226 1012 aa24.94■■□□□ 1.58
CCDC9-204ENST00000599398 NDUFV1P49821 464 aa24.94■■□□□ 1.58
CCDC9-204ENST00000599398 RESTQ13127 1097 aa24.94■■□□□ 1.58
CCDC9-204ENST00000599398 HSCBQ8IWL3 235 aa24.94■■□□□ 1.58
CCDC9-204ENST00000599398 SNX21Q969T3 373 aa24.94■■□□□ 1.58
CCDC9-204ENST00000599398 GAD1Q99259 594 aa24.94■■□□□ 1.58
CCDC9-204ENST00000599398 TDRD15B5MCY1 1934 aaKnown RBP24.93■■□□□ 1.58
CCDC9-204ENST00000599398 ARL5CA6NH57 179 aa24.93■■□□□ 1.58
CCDC9-204ENST00000599398 CCDC169A6NNP5 214 aa24.93■■□□□ 1.58
CCDC9-204ENST00000599398 N4BP3O15049 544 aa24.93■■□□□ 1.58
CCDC9-204ENST00000599398 GALTP07902 379 aa24.93■■□□□ 1.58
CCDC9-204ENST00000599398 CA8P35219 290 aa24.93■■□□□ 1.58
CCDC9-204ENST00000599398 EFNA5P52803 228 aa24.93■■□□□ 1.58
CCDC9-204ENST00000599398 PEX3P56589 373 aa24.93■■□□□ 1.58
CCDC9-204ENST00000599398 DLX2Q07687 328 aaPredicted RBP24.93■■□□□ 1.58
CCDC9-204ENST00000599398 ADAM15Q13444 863 aa24.93■■□□□ 1.58
CCDC9-204ENST00000599398 CLUL1Q15846 466 aa24.93■■□□□ 1.58
CCDC9-204ENST00000599398 C1orf186Q6ZWK4 172 aa24.93■■□□□ 1.58
CCDC9-204ENST00000599398 EFHBQ8N7U6 833 aa24.93■■□□□ 1.58
CCDC9-204ENST00000599398 RASSF8Q8NHQ8 419 aa24.93■■□□□ 1.58
CCDC9-204ENST00000599398 CALML4Q96GE6 196 aa24.93■■□□□ 1.58
CCDC9-204ENST00000599398 DRC1Q96MC2 740 aa24.93■■□□□ 1.58
CCDC9-204ENST00000599398 CCDC113Q9H0I3 377 aa24.93■■□□□ 1.58
CCDC9-204ENST00000599398 NGRNQ9NPE2 291 aaKnown RBP24.93■■□□□ 1.58
CCDC9-204ENST00000599398 USP20Q9Y2K6 914 aa24.93■■□□□ 1.58
CCDC9-204ENST00000599398 CLIC4Q9Y696 253 aa24.93■■□□□ 1.58
CCDC9-204ENST00000599398 MYH11P35749 1972 aa24.93■■□□□ 1.58
CCDC9-204ENST00000599398 TTLL13PA6NNM8 815 aa24.92■■□□□ 1.58
CCDC9-204ENST00000599398 ACKR2O00590 384 aa24.92■■□□□ 1.58
CCDC9-204ENST00000599398 B4GALT3O60512 393 aa24.92■■□□□ 1.58
CCDC9-204ENST00000599398 TBX10O75333 385 aa24.92■■□□□ 1.58
CCDC9-204ENST00000599398 DDHD2O94830 711 aa24.92■■□□□ 1.58
CCDC9-204ENST00000599398 AKAP5P24588 427 aa24.92■■□□□ 1.58
CCDC9-204ENST00000599398 SLC11A1P49279 550 aa24.92■■□□□ 1.58
CCDC9-204ENST00000599398 RAD51AP2Q09MP3 1159 aa24.92■■□□□ 1.58
CCDC9-204ENST00000599398 DMP1Q13316 513 aaPredicted RBP24.92■■□□□ 1.58
CCDC9-204ENST00000599398 PUS10Q3MIT2 529 aaKnown RBP24.92■■□□□ 1.58
CCDC9-204ENST00000599398 FAM173BQ6P4H8 233 aa24.92■■□□□ 1.58
CCDC9-204ENST00000599398 TMEM173Q86WV6 379 aaPredicted RBP24.92■■□□□ 1.58
CCDC9-204ENST00000599398 KCTD17Q8N5Z5 321 aa24.92■■□□□ 1.58
CCDC9-204ENST00000599398 IGSF21Q96ID5 467 aa24.92■■□□□ 1.58
CCDC9-204ENST00000599398 ZFP42Q96MM3 310 aa24.92■■□□□ 1.58
CCDC9-204ENST00000599398 ADPGKQ9BRR6 497 aa24.92■■□□□ 1.58
CCDC9-204ENST00000599398 PDZD7Q9H5P4 517 aa24.92■■□□□ 1.58
CCDC9-204ENST00000599398 PARP2Q9UGN5 583 aa24.92■■□□□ 1.58
CCDC9-204ENST00000599398 MTMR6Q9Y217 621 aa24.92■■□□□ 1.58
CCDC9-204ENST00000599398 GIT1Q9Y2X7 761 aa24.92■■□□□ 1.58
CCDC9-204ENST00000599398 STX6O43752 255 aa24.91■■□□□ 1.58
CCDC9-204ENST00000599398 HSP90AA1P07900 732 aaKnown RBP24.91■■□□□ 1.58
CCDC9-204ENST00000599398 PLA2G4BP0C869 781 aa24.91■■□□□ 1.58
CCDC9-204ENST00000599398 IL9P15248 144 aa24.91■■□□□ 1.58
CCDC9-204ENST00000599398 LONP1P36776 959 aaKnown RBP24.91■■□□□ 1.58
CCDC9-204ENST00000599398 SCNN1GP51170 649 aa24.91■■□□□ 1.58
CCDC9-204ENST00000599398 CEBPZQ03701 1054 aaKnown RBP24.91■■□□□ 1.58
CCDC9-204ENST00000599398 GRIN1Q05586 938 aa24.91■■□□□ 1.58
CCDC9-204ENST00000599398 BMS1Q14692 1282 aaKnown RBP24.91■■□□□ 1.58
CCDC9-204ENST00000599398 TMEM119Q4V9L6 283 aa24.91■■□□□ 1.58
CCDC9-204ENST00000599398 DAW1Q8N136 415 aa24.91■■□□□ 1.58
CCDC9-204ENST00000599398 SYT2Q8N9I0 419 aaPredicted RBP24.91■■□□□ 1.58
CCDC9-204ENST00000599398 MUC3AQ02505 3323 aa24.91■■□□□ 1.58
CCDC9-204ENST00000599398 GRXCR2A6NFK2 248 aa24.9■■□□□ 1.58
CCDC9-204ENST00000599398 SFI1A8K8P3 1242 aa24.9■■□□□ 1.58
CCDC9-204ENST00000599398 HIDE1A8MVS5 230 aa24.9■■□□□ 1.58
CCDC9-204ENST00000599398 K7ERI5 159 aa24.9■■□□□ 1.58
CCDC9-204ENST00000599398 SLC26A4O43511 780 aa24.9■■□□□ 1.58
CCDC9-204ENST00000599398 ALDH2P05091 517 aa24.9■■□□□ 1.58
CCDC9-204ENST00000599398 NPTX2P47972 431 aa24.9■■□□□ 1.58
CCDC9-204ENST00000599398 SMC1AQ14683 1233 aaKnown RBP24.9■■□□□ 1.58
CCDC9-204ENST00000599398 VPS52Q8N1B4 723 aa24.9■■□□□ 1.58
CCDC9-204ENST00000599398 BCL7CQ8WUZ0 217 aaPredicted RBP24.9■■□□□ 1.58
CCDC9-204ENST00000599398 CDCA3Q99618 268 aaPredicted RBP24.9■■□□□ 1.58
CCDC9-204ENST00000599398 TMEM175Q9BSA9 504 aa24.9■■□□□ 1.58
CCDC9-204ENST00000599398 TIPINQ9BVW5 301 aa24.9■■□□□ 1.58
CCDC9-204ENST00000599398 KMT5AQ9NQR1 393 aa24.9■■□□□ 1.58
CCDC9-204ENST00000599398 KLK14Q9P0G3 267 aa24.9■■□□□ 1.58
CCDC9-204ENST00000599398 FAM50BQ9Y247 325 aa24.9■■□□□ 1.58
CCDC9-204ENST00000599398 FAN1Q9Y2M0 1017 aa24.9■■□□□ 1.58
CCDC9-204ENST00000599398 BDP1A6H8Y1 2624 aa24.89■■□□□ 1.58
CCDC9-204ENST00000599398 EDN1P05305 212 aa24.89■■□□□ 1.58
CCDC9-204ENST00000599398 GUCY2CP25092 1073 aa24.89■■□□□ 1.58
CCDC9-204ENST00000599398 MARCKSP29966 332 aaPredicted RBP24.89■■□□□ 1.58
CCDC9-204ENST00000599398 SLC12A3P55017 1021 aa24.89■■□□□ 1.58
CCDC9-204ENST00000599398 MAPK7Q13164 816 aa24.89■■□□□ 1.58
CCDC9-204ENST00000599398 DUSP6Q16828 381 aa24.89■■□□□ 1.58
CCDC9-204ENST00000599398 DDX53Q86TM3 631 aaKnown RBP24.89■■□□□ 1.58
CCDC9-204ENST00000599398 RPS6KC1Q96S38 1066 aa24.89■■□□□ 1.58
CCDC9-204ENST00000599398 MIOSQ9NXC5 875 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms