RNA–Protein interactions for RNA: ENST00000598938.1

LIG1-216, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-216ENST00000598938 PIN4Q9Y237 131 aaKnown RBP20.02■□□□□ 0.8
LIG1-216ENST00000598938 MYH11P35749 1972 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 DENND3A2RUS2 1198 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 EPOPA6NHQ4 379 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 ACKR2O00590 384 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 TRAK2O60296 914 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 NR1I2O75469 434 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 AMHP03971 560 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 PRKCBP05771 671 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 MYL1P05976 194 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 MAPTP10636 758 aaKnown RBP20.01■□□□□ 0.79
LIG1-216ENST00000598938 IDEP14735 1019 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 ZSCAN20P17040 1043 aaPredicted RBP20.01■□□□□ 0.79
LIG1-216ENST00000598938 CASP1P29466 404 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 AXLP30530 894 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 ASIC1P78348 528 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 CUL4BQ13620 913 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 TMEM31Q5JXX7 168 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 CCDC65Q8IXS2 484 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 ARNTL2Q8WYA1 636 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 TRAIPQ9BWF2 469 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 BLZF1Q9H2G9 400 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 OLFML3Q9NRN5 406 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 C1orf112Q9NSG2 853 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 CNTNAP2Q9UHC6 1331 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 BRWD1Q9NSI6 2320 aa20.01■□□□□ 0.79
LIG1-216ENST00000598938 C9IYK1 514 aa20■□□□□ 0.79
LIG1-216ENST00000598938 H0YCG3 227 aa20■□□□□ 0.79
LIG1-216ENST00000598938 K7ERI5 159 aa20■□□□□ 0.79
LIG1-216ENST00000598938 B4GALT5O43286 388 aa20■□□□□ 0.79
LIG1-216ENST00000598938 EDN1P05305 212 aa20■□□□□ 0.79
LIG1-216ENST00000598938 ARF4P18085 180 aaPredicted RBP20■□□□□ 0.79
LIG1-216ENST00000598938 SCP2P22307 547 aa20■□□□□ 0.79
LIG1-216ENST00000598938 FAM189BP81408 668 aa20■□□□□ 0.79
LIG1-216ENST00000598938 COASYQ13057 564 aa20■□□□□ 0.79
LIG1-216ENST00000598938 KANK3Q6NY19 840 aa20■□□□□ 0.79
LIG1-216ENST00000598938 HAUS6Q7Z4H7 955 aa20■□□□□ 0.79
LIG1-216ENST00000598938 FAM178BQ8IXR5 827 aa20■□□□□ 0.79
LIG1-216ENST00000598938 TIGD1Q96MW7 591 aa20■□□□□ 0.79
LIG1-216ENST00000598938 ST6GALNAC4Q9H4F1 302 aa20■□□□□ 0.79
LIG1-216ENST00000598938 CERS4Q9HA82 394 aa20■□□□□ 0.79
LIG1-216ENST00000598938 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.99■□□□□ 0.79
LIG1-216ENST00000598938 K7ENM7 598 aa19.99■□□□□ 0.79
LIG1-216ENST00000598938 GPR37L1O60883 481 aa19.99■□□□□ 0.79
LIG1-216ENST00000598938 NMT1P30419 496 aaKnown RBP19.99■□□□□ 0.79
LIG1-216ENST00000598938 SARSP49591 514 aaKnown RBP19.99■□□□□ 0.79
LIG1-216ENST00000598938 NCBP1Q09161 790 aaKnown RBP19.99■□□□□ 0.79
LIG1-216ENST00000598938 PRPF4BQ13523 1007 aaKnown RBP19.99■□□□□ 0.79
LIG1-216ENST00000598938 HERC4Q5GLZ8 1057 aaPredicted RBP19.99■□□□□ 0.79
LIG1-216ENST00000598938 NOTUMQ6P988 496 aa19.99■□□□□ 0.79
LIG1-216ENST00000598938 UNC13DQ70J99 1090 aa19.99■□□□□ 0.79
LIG1-216ENST00000598938 SLC24A5Q71RS6 500 aa19.99■□□□□ 0.79
LIG1-216ENST00000598938 CRIPAKQ8N1N5 446 aa19.99■□□□□ 0.79
LIG1-216ENST00000598938 TOP1MTQ969P6 601 aa19.99■□□□□ 0.79
LIG1-216ENST00000598938 CCDC51Q96ER9 411 aa19.99■□□□□ 0.79
LIG1-216ENST00000598938 CPB2Q96IY4 423 aa19.99■□□□□ 0.79
LIG1-216ENST00000598938 EPHX3Q9H6B9 360 aa19.99■□□□□ 0.79
LIG1-216ENST00000598938 LMBRD1Q9NUN5 540 aa19.99■□□□□ 0.79
LIG1-216ENST00000598938 DACT1Q9NYF0 836 aa19.99■□□□□ 0.79
LIG1-216ENST00000598938 PVALEFA0A1B0GWK0 134 aa19.98■□□□□ 0.79
LIG1-216ENST00000598938 TTLL13PA6NNM8 815 aa19.98■□□□□ 0.79
LIG1-216ENST00000598938 KLRC4O43908 158 aa19.98■□□□□ 0.79
LIG1-216ENST00000598938 LPXNO60711 386 aa19.98■□□□□ 0.79
LIG1-216ENST00000598938 PRR29P0C7W0 189 aa19.98■□□□□ 0.79
LIG1-216ENST00000598938 ABCD1P33897 745 aa19.98■□□□□ 0.79
LIG1-216ENST00000598938 GTF2BQ00403 316 aa19.98■□□□□ 0.79
LIG1-216ENST00000598938 EHHADHQ08426 723 aa19.98■□□□□ 0.79
LIG1-216ENST00000598938 UBXN11Q5T124 520 aa19.98■□□□□ 0.79
LIG1-216ENST00000598938 NT5DC1Q5TFE4 455 aa19.98■□□□□ 0.79
LIG1-216ENST00000598938 TWF2Q6IBS0 349 aaKnown RBP19.98■□□□□ 0.79
LIG1-216ENST00000598938 ZNF720Q7Z2F6 126 aa19.98■□□□□ 0.79
LIG1-216ENST00000598938 MYOCDQ8IZQ8 938 aa19.98■□□□□ 0.79
LIG1-216ENST00000598938 STRA6Q9BX79 667 aa19.98■□□□□ 0.79
LIG1-216ENST00000598938 PIEZO1Q92508 2521 aa19.97■□□□□ 0.79
LIG1-216ENST00000598938 A0A0U1RQF3 1178 aa19.97■□□□□ 0.79
LIG1-216ENST00000598938 A0A1B0GUA9 196 aa19.97■□□□□ 0.79
LIG1-216ENST00000598938 PPP1R37O75864 691 aa19.97■□□□□ 0.79
LIG1-216ENST00000598938 ARHGEF15O94989 841 aa19.97■□□□□ 0.79
LIG1-216ENST00000598938 DPYDQ12882 1025 aa19.97■□□□□ 0.79
LIG1-216ENST00000598938 NPAS4Q8IUM7 802 aa19.97■□□□□ 0.79
LIG1-216ENST00000598938 CCDC34Q96HJ3 373 aa19.97■□□□□ 0.79
LIG1-216ENST00000598938 ELAC1Q9H777 363 aaKnown RBP19.97■□□□□ 0.79
LIG1-216ENST00000598938 MRPL44Q9H9J2 332 aaKnown RBP19.97■□□□□ 0.79
LIG1-216ENST00000598938 TBX20Q9UMR3 447 aa19.97■□□□□ 0.79
LIG1-216ENST00000598938 USP20Q9Y2K6 914 aa19.97■□□□□ 0.79
LIG1-216ENST00000598938 N4BP3O15049 544 aa19.96■□□□□ 0.79
LIG1-216ENST00000598938 GJB5O95377 273 aa19.96■□□□□ 0.79
LIG1-216ENST00000598938 RAB27AP51159 221 aa19.96■□□□□ 0.79
LIG1-216ENST00000598938 STRN3Q13033 797 aa19.96■□□□□ 0.79
LIG1-216ENST00000598938 POSTNQ15063 836 aa19.96■□□□□ 0.79
LIG1-216ENST00000598938 TMCO2Q7Z6W1 182 aaPredicted RBP19.96■□□□□ 0.79
LIG1-216ENST00000598938 ECHDC2Q86YB7 292 aa19.96■□□□□ 0.79
LIG1-216ENST00000598938 ELOA2Q8IYF1 753 aaPredicted RBP19.96■□□□□ 0.79
LIG1-216ENST00000598938 HVCN1Q96D96 273 aa19.96■□□□□ 0.79
LIG1-216ENST00000598938 ACO2Q99798 780 aaKnown RBP19.96■□□□□ 0.79
LIG1-216ENST00000598938 MRPL4Q9BYD3 311 aaKnown RBP19.96■□□□□ 0.79
LIG1-216ENST00000598938 FGFBP2Q9BYJ0 223 aa19.96■□□□□ 0.79
LIG1-216ENST00000598938 PDZD7Q9H5P4 517 aa19.96■□□□□ 0.79
LIG1-216ENST00000598938 FAM105AQ9NUU6 356 aa19.96■□□□□ 0.79
LIG1-216ENST00000598938 RNF216Q9NWF9 866 aaPredicted RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms