RNA–Protein interactions for RNA: ENST00000598111.6

PDE4C-213, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,284 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-213ENST00000598111 KRT17Q04695 432 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 DHX8Q14562 1220 aaKnown RBP13.58□□□□□ -0.24
PDE4C-213ENST00000598111 SPECC1Q5M775 1068 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 EP400NLQ6ZTU2 488 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 DAW1Q8N136 415 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 KRI1Q8N9T8 703 aaKnown RBP13.58□□□□□ -0.24
PDE4C-213ENST00000598111 SMG8Q8ND04 991 aaKnown RBP13.58□□□□□ -0.24
PDE4C-213ENST00000598111 MICAL1Q8TDZ2 1067 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 LARP4BQ92615 738 aaKnown RBP13.58□□□□□ -0.24
PDE4C-213ENST00000598111 RAD54LQ92698 747 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 TMEM169Q96HH4 297 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 FAM193BQ96PV7 902 aaPredicted RBP13.58□□□□□ -0.24
PDE4C-213ENST00000598111 ASB2Q96Q27 587 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 RPS6KC1Q96S38 1066 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 CCSER1Q9C0I3 900 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 PDZD7Q9H5P4 517 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 UBE2ZQ9H832 354 aaPredicted RBP13.58□□□□□ -0.24
PDE4C-213ENST00000598111 ENTPD7Q9NQZ7 604 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 KANSL3Q9P2N6 904 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 CCDC39Q9UFE4 941 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 LZTS1Q9Y250 596 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 SRPRBQ9Y5M8 271 aaKnown RBP13.58□□□□□ -0.24
PDE4C-213ENST00000598111 TRANK1O15050 2925 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 ZMYM2Q9UBW7 1377 aa13.58□□□□□ -0.24
PDE4C-213ENST00000598111 CITO14578 2027 aa13.57□□□□□ -0.24
PDE4C-213ENST00000598111 K7ERI5 159 aa13.57□□□□□ -0.24
PDE4C-213ENST00000598111 F13A1P00488 732 aa13.57□□□□□ -0.24
PDE4C-213ENST00000598111 NASPP49321 788 aaPredicted RBP13.57□□□□□ -0.24
PDE4C-213ENST00000598111 SMTNP53814 917 aa13.57□□□□□ -0.24
PDE4C-213ENST00000598111 PLCB3Q01970 1234 aa13.57□□□□□ -0.24
PDE4C-213ENST00000598111 TFF2Q03403 129 aa13.57□□□□□ -0.24
PDE4C-213ENST00000598111 SLC39A14Q15043 492 aa13.57□□□□□ -0.24
PDE4C-213ENST00000598111 DCAF4L1Q3SXM0 396 aa13.57□□□□□ -0.24
PDE4C-213ENST00000598111 PDE12Q6L8Q7 609 aaKnown RBP13.57□□□□□ -0.24
PDE4C-213ENST00000598111 SLC39A11Q8N1S5 342 aa13.57□□□□□ -0.24
PDE4C-213ENST00000598111 MRPS27Q92552 414 aaKnown RBP13.57□□□□□ -0.24
PDE4C-213ENST00000598111 SYMPKQ92797 1274 aaKnown RBP13.57□□□□□ -0.24
PDE4C-213ENST00000598111 EPSTI1Q96J88 318 aa13.57□□□□□ -0.24
PDE4C-213ENST00000598111 GAD1Q99259 594 aa13.57□□□□□ -0.24
PDE4C-213ENST00000598111 NRDE2Q9H7Z3 1164 aa13.57□□□□□ -0.24
PDE4C-213ENST00000598111 LARSQ9P2J5 1176 aaKnown RBP13.57□□□□□ -0.24
PDE4C-213ENST00000598111 STK17AQ9UEE5 414 aa13.57□□□□□ -0.24
PDE4C-213ENST00000598111 KCNG1Q9UIX4 513 aa13.57□□□□□ -0.24
PDE4C-213ENST00000598111 ODF2LQ9ULJ1 636 aa13.57□□□□□ -0.24
PDE4C-213ENST00000598111 GIT1Q9Y2X7 761 aa13.57□□□□□ -0.24
PDE4C-213ENST00000598111 RBM19Q9Y4C8 960 aaKnown RBP13.57□□□□□ -0.24
PDE4C-213ENST00000598111 MORC2Q9Y6X9 1032 aaPredicted RBP13.57□□□□□ -0.24
PDE4C-213ENST00000598111 TCF20Q9UGU0 1960 aaKnown RBP13.57□□□□□ -0.24
PDE4C-213ENST00000598111 ARL5CA6NH57 179 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 SLC16A4O15374 487 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 NCK2O43639 380 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 TBCAO75347 108 aaKnown RBP13.56□□□□□ -0.24
PDE4C-213ENST00000598111 FAM13AO94988 1023 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 POMCP01189 267 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 PLS3P13797 630 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 KCNA5P22460 613 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 IRS1P35568 1242 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 CACNB1Q02641 598 aaPredicted RBP13.56□□□□□ -0.24
PDE4C-213ENST00000598111 STRN3Q13033 797 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 CAMK1Q14012 370 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 MCM6Q14566 821 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 BMS1Q14692 1282 aaKnown RBP13.56□□□□□ -0.24
PDE4C-213ENST00000598111 ZNF568Q3ZCX4 644 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 ATF7IP2Q5U623 682 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 PLPP4Q5VZY2 271 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 PABPC5Q96DU9 382 aaKnown RBP13.56□□□□□ -0.24
PDE4C-213ENST00000598111 CLIC6Q96NY7 704 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 TCF25Q9BQ70 676 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 REEP2Q9BRK0 252 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 MRPL4Q9BYD3 311 aaKnown RBP13.56□□□□□ -0.24
PDE4C-213ENST00000598111 TMEM134Q9H6X4 195 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 BLOC1S4Q9NUP1 217 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 CLDND1Q9NY35 253 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 ARHGAP28Q9P2N2 729 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 DAXXQ9UER7 740 aaPredicted RBP13.56□□□□□ -0.24
PDE4C-213ENST00000598111 PARP2Q9UGN5 583 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 TRIP11Q15643 1979 aa13.56□□□□□ -0.24
PDE4C-213ENST00000598111 NPHP3-ACAD11A0A0J9YXS1 232 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 FSD2A1L4K1 749 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 TTLL13PA6NNM8 815 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 SFI1A8K8P3 1242 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 NT5C1B-RDH14C9J2C7 533 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 H0YCG3 227 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 SPTLC2O15270 562 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 INPPL1O15357 1258 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 YEATS4O95619 227 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 EDN1P05305 212 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 AKAP5P24588 427 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 CA8P35219 290 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 STAT6P42226 847 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 SCNN1GP51170 649 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 HYAL1Q12794 435 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 GRIK3Q13003 919 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 FOXD4L6Q3SYB3 417 aaPredicted RBP13.55□□□□□ -0.24
PDE4C-213ENST00000598111 RRAGBQ5VZM2 374 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 EEF1DP3Q658K8 133 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 FOXD4L3Q6VB84 417 aaPredicted RBP13.55□□□□□ -0.24
PDE4C-213ENST00000598111 USP49Q70CQ1 688 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 LINC00301Q8NCQ3 95 aa13.55□□□□□ -0.24
PDE4C-213ENST00000598111 SPIRE2Q8WWL2 714 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms