RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 GAS2O43903 313 aaKnown RBP17.41■□□□□ 0.38
LIG1-214ENST00000597146 EFEMP2O95967 443 aa17.41■□□□□ 0.38
LIG1-214ENST00000597146 MAGEA9P43362 315 aa17.41■□□□□ 0.38
LIG1-214ENST00000597146 ZBTB41Q5SVQ8 909 aa17.41■□□□□ 0.38
LIG1-214ENST00000597146 TPRG1Q6ZUI0 275 aa17.41■□□□□ 0.38
LIG1-214ENST00000597146 CATSPER4Q7RTX7 472 aa17.41■□□□□ 0.38
LIG1-214ENST00000597146 MICU3Q86XE3 530 aa17.41■□□□□ 0.38
LIG1-214ENST00000597146 CRYGNQ8WXF5 182 aa17.41■□□□□ 0.38
LIG1-214ENST00000597146 PGBD4Q96DM1 585 aa17.41■□□□□ 0.38
LIG1-214ENST00000597146 KXD1Q9BQD3 176 aa17.41■□□□□ 0.38
LIG1-214ENST00000597146 SH2D3AQ9BRG2 576 aa17.41■□□□□ 0.38
LIG1-214ENST00000597146 PLEKHA4Q9H4M7 779 aa17.41■□□□□ 0.38
LIG1-214ENST00000597146 ANO2Q9NQ90 1003 aa17.41■□□□□ 0.38
LIG1-214ENST00000597146 ANGPTL2Q9UKU9 493 aa17.41■□□□□ 0.38
LIG1-214ENST00000597146 RBM8AQ9Y5S9 174 aaKnown RBP17.41■□□□□ 0.38
LIG1-214ENST00000597146 SMCO2A6NFE2 343 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 ADAMTS3O15072 1205 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 GDF9O60383 454 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 CENPBP07199 599 aaPredicted RBP17.4■□□□□ 0.38
LIG1-214ENST00000597146 CALM1P0DP23 149 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 CALM2P0DP24 149 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 CALM3P0DP25 149 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 RPL17P18621 184 aaKnown RBP17.4■□□□□ 0.38
LIG1-214ENST00000597146 OR1G1P47890 313 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 DSG1Q02413 1049 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 MTAPQ13126 283 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 BMP2KLQ5H9B9 411 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 GRASPQ7Z6J2 395 aaPredicted RBP17.4■□□□□ 0.38
LIG1-214ENST00000597146 KSR1Q8IVT5 923 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 FANCBQ8NB91 859 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 HDAC7Q8WUI4 952 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 MAP4K1Q92918 833 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 CLDN23Q96B33 292 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 ESYT1Q9BSJ8 1104 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 LRRC2Q9BYS8 371 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 NRBP2Q9NSY0 501 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 CDH7Q9ULB5 785 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 ZFP37Q9Y6Q3 630 aaPredicted RBP17.4■□□□□ 0.38
LIG1-214ENST00000597146 COL4A2P08572 1712 aa17.4■□□□□ 0.38
LIG1-214ENST00000597146 WDR64B1ANS9 1081 aa17.39■□□□□ 0.37
LIG1-214ENST00000597146 TDGF1P13385 188 aa17.39■□□□□ 0.37
LIG1-214ENST00000597146 SETQ01105 290 aaPredicted RBP17.39■□□□□ 0.37
LIG1-214ENST00000597146 TARBP2Q15633 366 aaKnown RBP17.39■□□□□ 0.37
LIG1-214ENST00000597146 MTERF2Q49AM1 385 aa17.39■□□□□ 0.37
LIG1-214ENST00000597146 LAIR1Q6GTX8 287 aa17.39■□□□□ 0.37
LIG1-214ENST00000597146 PRR23BQ6ZRT6 265 aa17.39■□□□□ 0.37
LIG1-214ENST00000597146 SKAP1Q86WV1 359 aa17.39■□□□□ 0.37
LIG1-214ENST00000597146 RHPN2Q8IUC4 686 aa17.39■□□□□ 0.37
LIG1-214ENST00000597146 COLGALT2Q8IYK4 626 aa17.39■□□□□ 0.37
LIG1-214ENST00000597146 FGF13Q92913 245 aa17.39■□□□□ 0.37
LIG1-214ENST00000597146 NLRP4Q96MN2 994 aa17.39■□□□□ 0.37
LIG1-214ENST00000597146 SH2B1Q9NRF2 756 aaPredicted RBP17.39■□□□□ 0.37
LIG1-214ENST00000597146 FAM217BQ9NTX9 383 aaPredicted RBP17.39■□□□□ 0.37
LIG1-214ENST00000597146 AGPAT5Q9NUQ2 364 aa17.39■□□□□ 0.37
LIG1-214ENST00000597146 SEPT9Q9UHD8 586 aaPredicted RBP17.39■□□□□ 0.37
LIG1-214ENST00000597146 RAB23Q9ULC3 237 aa17.39■□□□□ 0.37
LIG1-214ENST00000597146 SLC12A7Q9Y666 1083 aa17.39■□□□□ 0.37
LIG1-214ENST00000597146 GREB1Q4ZG55 1949 aa17.39■□□□□ 0.37
LIG1-214ENST00000597146 TICRRQ7Z2Z1 1910 aa17.39■□□□□ 0.37
LIG1-214ENST00000597146 F5P12259 2224 aa17.39■□□□□ 0.37
LIG1-214ENST00000597146 CHMP2AO43633 222 aa17.38■□□□□ 0.37
LIG1-214ENST00000597146 ZMYND10O75800 440 aa17.38■□□□□ 0.37
LIG1-214ENST00000597146 CYP3A4P08684 503 aa17.38■□□□□ 0.37
LIG1-214ENST00000597146 PMLP29590 882 aa17.38■□□□□ 0.37
LIG1-214ENST00000597146 PRR16Q569H4 304 aa17.38■□□□□ 0.37
LIG1-214ENST00000597146 RNF20Q5VTR2 975 aa17.38■□□□□ 0.37
LIG1-214ENST00000597146 LILRA6Q6PI73 481 aa17.38■□□□□ 0.37
LIG1-214ENST00000597146 RSPO2Q6UXX9 243 aaPredicted RBP17.38■□□□□ 0.37
LIG1-214ENST00000597146 PRR23CQ6ZRP0 262 aa17.38■□□□□ 0.37
LIG1-214ENST00000597146 MTSS1LQ765P7 747 aa17.38■□□□□ 0.37
LIG1-214ENST00000597146 MRPL10Q7Z7H8 261 aaKnown RBP17.38■□□□□ 0.37
LIG1-214ENST00000597146 ITFG1Q8TB96 612 aa17.38■□□□□ 0.37
LIG1-214ENST00000597146 CEP89Q96ST8 783 aa17.38■□□□□ 0.37
LIG1-214ENST00000597146 PHF20Q9BVI0 1012 aa17.38■□□□□ 0.37
LIG1-214ENST00000597146 DISC1Q9NRI5 854 aa17.38■□□□□ 0.37
LIG1-214ENST00000597146 SEMA4GQ9NTN9 838 aa17.38■□□□□ 0.37
LIG1-214ENST00000597146 KANSL3Q9P2N6 904 aa17.38■□□□□ 0.37
LIG1-214ENST00000597146 CNTNAP2Q9UHC6 1331 aa17.38■□□□□ 0.37
LIG1-214ENST00000597146 SHISA7A6NL88 538 aa17.37■□□□□ 0.37
LIG1-214ENST00000597146 RPS9P46781 194 aaKnown RBP17.37■□□□□ 0.37
LIG1-214ENST00000597146 PFKPQ01813 784 aa17.37■□□□□ 0.37
LIG1-214ENST00000597146 FZD5Q13467 585 aa17.37■□□□□ 0.37
LIG1-214ENST00000597146 ACAP1Q15027 740 aa17.37■□□□□ 0.37
LIG1-214ENST00000597146 UBXN11Q5T124 520 aa17.37■□□□□ 0.37
LIG1-214ENST00000597146 ZNF410Q86VK4 478 aa17.37■□□□□ 0.37
LIG1-214ENST00000597146 TMEM87BQ96K49 555 aa17.37■□□□□ 0.37
LIG1-214ENST00000597146 FAM126AQ9BYI3 521 aaPredicted RBP17.37■□□□□ 0.37
LIG1-214ENST00000597146 INO80BQ9C086 356 aaPredicted RBP17.37■□□□□ 0.37
LIG1-214ENST00000597146 CHST7Q9NS84 486 aa17.37■□□□□ 0.37
LIG1-214ENST00000597146 SUCLA2Q9P2R7 463 aaPredicted RBP17.37■□□□□ 0.37
LIG1-214ENST00000597146 IGKV6-21A0A0C4DH24 114 aa17.36■□□□□ 0.37
LIG1-214ENST00000597146 CDC45O75419 566 aa17.36■□□□□ 0.37
LIG1-214ENST00000597146 RETP07949 1114 aa17.36■□□□□ 0.37
LIG1-214ENST00000597146 MCM5P33992 734 aa17.36■□□□□ 0.37
LIG1-214ENST00000597146 N4BP2L1Q5TBK1 243 aaPredicted RBP17.36■□□□□ 0.37
LIG1-214ENST00000597146 TEX2Q8IWB9 1127 aa17.36■□□□□ 0.37
LIG1-214ENST00000597146 TMTC2Q8N394 836 aa17.36■□□□□ 0.37
LIG1-214ENST00000597146 LENG9Q96B70 501 aa17.36■□□□□ 0.37
LIG1-214ENST00000597146 MTA3Q9BTC8 594 aa17.36■□□□□ 0.37
LIG1-214ENST00000597146 GPR62Q9BZJ7 368 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms