RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 SPTBN5Q9NRC6 3674 aaKnown RBP23.24■■□□□ 1.31
PNKP-209ENST00000596726 NPHP3-ACAD11A0A0J9YXS1 232 aa23.24■■□□□ 1.31
PNKP-209ENST00000596726 SFI1A8K8P3 1242 aa23.24■■□□□ 1.31
PNKP-209ENST00000596726 N4BP3O15049 544 aa23.24■■□□□ 1.31
PNKP-209ENST00000596726 NPTXRO95502 500 aa23.24■■□□□ 1.31
PNKP-209ENST00000596726 YEATS4O95619 227 aa23.24■■□□□ 1.31
PNKP-209ENST00000596726 RAD51AP2Q09MP3 1159 aa23.24■■□□□ 1.31
PNKP-209ENST00000596726 DMP1Q13316 513 aaPredicted RBP23.24■■□□□ 1.31
PNKP-209ENST00000596726 MCM6Q14566 821 aa23.24■■□□□ 1.31
PNKP-209ENST00000596726 STK38Q15208 465 aa23.24■■□□□ 1.31
PNKP-209ENST00000596726 NT5DC1Q5TFE4 455 aa23.24■■□□□ 1.31
PNKP-209ENST00000596726 SLC39A11Q8N1S5 342 aa23.24■■□□□ 1.31
PNKP-209ENST00000596726 SPIRE2Q8WWL2 714 aa23.24■■□□□ 1.31
PNKP-209ENST00000596726 TRIM6Q9C030 488 aaPredicted RBP23.24■■□□□ 1.31
PNKP-209ENST00000596726 NXF3Q9H4D5 531 aaKnown RBP23.24■■□□□ 1.31
PNKP-209ENST00000596726 KMT5AQ9NQR1 393 aa23.24■■□□□ 1.31
PNKP-209ENST00000596726 DAXXQ9UER7 740 aaPredicted RBP23.24■■□□□ 1.31
PNKP-209ENST00000596726 KCNG1Q9UIX4 513 aa23.24■■□□□ 1.31
PNKP-209ENST00000596726 COG5Q9UP83 839 aa23.24■■□□□ 1.31
PNKP-209ENST00000596726 LZTS1Q9Y250 596 aa23.24■■□□□ 1.31
PNKP-209ENST00000596726 USP20Q9Y2K6 914 aa23.24■■□□□ 1.31
PNKP-209ENST00000596726 RBM19Q9Y4C8 960 aaKnown RBP23.24■■□□□ 1.31
PNKP-209ENST00000596726 K7ERI5 159 aa23.23■■□□□ 1.31
PNKP-209ENST00000596726 SPTLC2O15270 562 aa23.23■■□□□ 1.31
PNKP-209ENST00000596726 PPP6R2O75170 966 aa23.23■■□□□ 1.31
PNKP-209ENST00000596726 PLS3P13797 630 aa23.23■■□□□ 1.31
PNKP-209ENST00000596726 DDIT3P35638 169 aa23.23■■□□□ 1.31
PNKP-209ENST00000596726 PPM1AP35813 382 aa23.23■■□□□ 1.31
PNKP-209ENST00000596726 PBX3P40426 434 aa23.23■■□□□ 1.31
PNKP-209ENST00000596726 BCAR1P56945 870 aa23.23■■□□□ 1.31
PNKP-209ENST00000596726 TAS1R3Q7RTX0 852 aa23.23■■□□□ 1.31
PNKP-209ENST00000596726 GPBP1Q86WP2 473 aa23.23■■□□□ 1.31
PNKP-209ENST00000596726 RASSF8Q8NHQ8 419 aa23.23■■□□□ 1.31
PNKP-209ENST00000596726 URGCPQ8TCY9 931 aa23.23■■□□□ 1.31
PNKP-209ENST00000596726 SPG21Q9NZD8 308 aa23.23■■□□□ 1.31
PNKP-209ENST00000596726 KANSL3Q9P2N6 904 aa23.23■■□□□ 1.31
PNKP-209ENST00000596726 CCDC39Q9UFE4 941 aa23.23■■□□□ 1.31
PNKP-209ENST00000596726 ODF2LQ9ULJ1 636 aa23.23■■□□□ 1.31
PNKP-209ENST00000596726 GIT1Q9Y2X7 761 aa23.23■■□□□ 1.31
PNKP-209ENST00000596726 PHLPP2Q6ZVD8 1323 aa23.23■■□□□ 1.31
PNKP-209ENST00000596726 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.22■■□□□ 1.31
PNKP-209ENST00000596726 B4GALT3O60512 393 aa23.22■■□□□ 1.31
PNKP-209ENST00000596726 LIG1P18858 919 aa23.22■■□□□ 1.31
PNKP-209ENST00000596726 IRS1P35568 1242 aa23.22■■□□□ 1.31
PNKP-209ENST00000596726 COL19A1Q14993 1142 aa23.22■■□□□ 1.31
PNKP-209ENST00000596726 EEF1DP3Q658K8 133 aa23.22■■□□□ 1.31
PNKP-209ENST00000596726 ZNF280BQ86YH2 543 aa23.22■■□□□ 1.31
PNKP-209ENST00000596726 HACE1Q8IYU2 909 aa23.22■■□□□ 1.31
PNKP-209ENST00000596726 MRPS27Q92552 414 aaKnown RBP23.22■■□□□ 1.31
PNKP-209ENST00000596726 LARP4BQ92615 738 aaKnown RBP23.22■■□□□ 1.31
PNKP-209ENST00000596726 HLA-CQ95604 372 aa23.22■■□□□ 1.31
PNKP-209ENST00000596726 STK17AQ9UEE5 414 aa23.22■■□□□ 1.31
PNKP-209ENST00000596726 ZMYM2Q9UBW7 1377 aa23.22■■□□□ 1.31
PNKP-209ENST00000596726 CARNS1A5YM72 827 aa23.21■■□□□ 1.31
PNKP-209ENST00000596726 ARL5CA6NH57 179 aa23.21■■□□□ 1.31
PNKP-209ENST00000596726 SLC16A4O15374 487 aa23.21■■□□□ 1.31
PNKP-209ENST00000596726 ZC3H11AO75152 810 aaKnown RBP eCLIP23.21■■□□□ 1.31
PNKP-209ENST00000596726 DDHD2O94830 711 aa23.21■■□□□ 1.31
PNKP-209ENST00000596726 GALTP07902 379 aa23.21■■□□□ 1.31
PNKP-209ENST00000596726 ALDH7A1P49419 539 aaKnown RBP23.21■■□□□ 1.31
PNKP-209ENST00000596726 CACNB1Q02641 598 aaPredicted RBP23.21■■□□□ 1.31
PNKP-209ENST00000596726 RNASELQ05823 741 aaKnown RBP23.21■■□□□ 1.31
PNKP-209ENST00000596726 DHX8Q14562 1220 aaKnown RBP23.21■■□□□ 1.31
PNKP-209ENST00000596726 ATL3Q6DD88 541 aa23.21■■□□□ 1.31
PNKP-209ENST00000596726 KCNN1Q92952 543 aa23.21■■□□□ 1.31
PNKP-209ENST00000596726 GAD1Q99259 594 aa23.21■■□□□ 1.31
PNKP-209ENST00000596726 REEP2Q9BRK0 252 aa23.21■■□□□ 1.31
PNKP-209ENST00000596726 APOL6Q9BWW8 343 aa23.21■■□□□ 1.31
PNKP-209ENST00000596726 MIOSQ9NXC5 875 aa23.21■■□□□ 1.31
PNKP-209ENST00000596726 DNAJB4Q9UDY4 337 aa23.21■■□□□ 1.31
PNKP-209ENST00000596726 NT5C1B-RDH14C9J2C7 533 aa23.2■■□□□ 1.3
PNKP-209ENST00000596726 FSCN2O14926 492 aa23.2■■□□□ 1.3
PNKP-209ENST00000596726 POMCP01189 267 aa23.2■■□□□ 1.3
PNKP-209ENST00000596726 AKAP5P24588 427 aa23.2■■□□□ 1.3
PNKP-209ENST00000596726 TXLNAP40222 546 aa23.2■■□□□ 1.3
PNKP-209ENST00000596726 ZNF131P52739 623 aa23.2■■□□□ 1.3
PNKP-209ENST00000596726 ERVFC1P60507 584 aa23.2■■□□□ 1.3
PNKP-209ENST00000596726 MRPS5P82675 430 aaKnown RBP23.2■■□□□ 1.3
PNKP-209ENST00000596726 TFF2Q03403 129 aa23.2■■□□□ 1.3
PNKP-209ENST00000596726 GIT2Q14161 759 aa23.2■■□□□ 1.3
PNKP-209ENST00000596726 ATF7IP2Q5U623 682 aa23.2■■□□□ 1.3
PNKP-209ENST00000596726 RRAGBQ5VZM2 374 aa23.2■■□□□ 1.3
PNKP-209ENST00000596726 TMEM161BQ8NDZ6 487 aa23.2■■□□□ 1.3
PNKP-209ENST00000596726 GSTCDQ8NEC7 633 aa23.2■■□□□ 1.3
PNKP-209ENST00000596726 ZFP42Q96MM3 310 aa23.2■■□□□ 1.3
PNKP-209ENST00000596726 ASB2Q96Q27 587 aa23.2■■□□□ 1.3
PNKP-209ENST00000596726 ACO2Q99798 780 aaKnown RBP23.2■■□□□ 1.3
PNKP-209ENST00000596726 ADPGKQ9BRR6 497 aa23.2■■□□□ 1.3
PNKP-209ENST00000596726 TLR9Q9NR96 1032 aa23.2■■□□□ 1.3
PNKP-209ENST00000596726 LARSQ9P2J5 1176 aaKnown RBP23.2■■□□□ 1.3
PNKP-209ENST00000596726 TNFSF13BQ9Y275 285 aa23.2■■□□□ 1.3
PNKP-209ENST00000596726 ZDHHC9Q9Y397 364 aa23.2■■□□□ 1.3
PNKP-209ENST00000596726 CSPG5O95196 566 aa23.19■■□□□ 1.3
PNKP-209ENST00000596726 BRD1O95696 1058 aa23.19■■□□□ 1.3
PNKP-209ENST00000596726 MLH1P40692 756 aa23.19■■□□□ 1.3
PNKP-209ENST00000596726 SLC11A1P49279 550 aa23.19■■□□□ 1.3
PNKP-209ENST00000596726 SMTNP53814 917 aa23.19■■□□□ 1.3
PNKP-209ENST00000596726 KRT17Q04695 432 aa23.19■■□□□ 1.3
PNKP-209ENST00000596726 HYAL1Q12794 435 aa23.19■■□□□ 1.3
PNKP-209ENST00000596726 TMEM132AQ24JP5 1023 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms