RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 KCNK18Q7Z418 384 aa14.46□□□□□ -0.09
LIG1-212ENST00000596549 CNNM3Q8NE01 707 aa14.46□□□□□ -0.09
LIG1-212ENST00000596549 URGCPQ8TCY9 931 aa14.46□□□□□ -0.09
LIG1-212ENST00000596549 AUTS2Q8WXX7 1259 aa14.46□□□□□ -0.09
LIG1-212ENST00000596549 ZFP42Q96MM3 310 aa14.46□□□□□ -0.09
LIG1-212ENST00000596549 MMTAG2Q9BU76 263 aaKnown RBP14.46□□□□□ -0.09
LIG1-212ENST00000596549 KIFC3Q9BVG8 833 aa14.46□□□□□ -0.09
LIG1-212ENST00000596549 CCDC113Q9H0I3 377 aa14.46□□□□□ -0.09
LIG1-212ENST00000596549 BHMT2Q9H2M3 363 aa14.46□□□□□ -0.09
LIG1-212ENST00000596549 DDX19AQ9NUU7 478 aaKnown RBP14.46□□□□□ -0.09
LIG1-212ENST00000596549 MIOSQ9NXC5 875 aa14.46□□□□□ -0.09
LIG1-212ENST00000596549 KIF3AQ9Y496 699 aa14.46□□□□□ -0.09
LIG1-212ENST00000596549 USP15Q9Y4E8 981 aaPredicted RBP14.46□□□□□ -0.09
LIG1-212ENST00000596549 HCFC2Q9Y5Z7 792 aa14.46□□□□□ -0.09
LIG1-212ENST00000596549 CITO14578 2027 aa14.46□□□□□ -0.1
LIG1-212ENST00000596549 FSD2A1L4K1 749 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 E9PMD0 336 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 PI4K2BG5E9Z4 385 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 LAD1O00515 517 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 NPTXRO95502 500 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 CTSAP10619 480 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 CDC25AP30304 524 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 NAMPTP43490 491 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 MCM2P49736 904 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 SCNN1GP51170 649 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 ATP2C1P98194 919 aaPredicted RBP14.45□□□□□ -0.1
LIG1-212ENST00000596549 DSC1Q08554 894 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 FAM187BQ17R55 369 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 RILPL1Q5EBL4 403 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 MCTP1Q6DN14 999 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 SLC27A1Q6PCB7 646 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 SYCE2Q6PIF2 218 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 DDX53Q86TM3 631 aaKnown RBP14.45□□□□□ -0.1
LIG1-212ENST00000596549 VPS52Q8N1B4 723 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 MRPL43Q8N983 215 aaKnown RBP14.45□□□□□ -0.1
LIG1-212ENST00000596549 GSTCDQ8NEC7 633 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 SUSD6Q92537 303 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 PRIMPOLQ96LW4 560 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 GAD1Q99259 594 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 TMEM175Q9BSA9 504 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 APOL6Q9BWW8 343 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 FZD8Q9H461 694 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 POLD4Q9HCU8 107 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 RAPGEFL1Q9UHV5 662 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 CDH22Q9UJ99 828 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 KIAA1024Q9UPX6 916 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 USP20Q9Y2K6 914 aa14.45□□□□□ -0.1
LIG1-212ENST00000596549 MTCL1Q9Y4B5 1905 aaKnown RBP14.45□□□□□ -0.1
LIG1-212ENST00000596549 A0A1B0GUA9 196 aa14.44□□□□□ -0.1
LIG1-212ENST00000596549 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.44□□□□□ -0.1
LIG1-212ENST00000596549 FAM86C2PA6NEL3 165 aa14.44□□□□□ -0.1
LIG1-212ENST00000596549 ARL5CA6NH57 179 aa14.44□□□□□ -0.1
LIG1-212ENST00000596549 F8W810 466 aa14.44□□□□□ -0.1
LIG1-212ENST00000596549 NRP1O14786 923 aa14.44□□□□□ -0.1
LIG1-212ENST00000596549 CLASP2O75122 1294 aaKnown RBP14.44□□□□□ -0.1
LIG1-212ENST00000596549 AKAP5P24588 427 aa14.44□□□□□ -0.1
LIG1-212ENST00000596549 PDIA5Q14554 519 aa14.44□□□□□ -0.1
LIG1-212ENST00000596549 PTPN14Q15678 1187 aa14.44□□□□□ -0.1
LIG1-212ENST00000596549 ANKRD54Q6NXT1 300 aa14.44□□□□□ -0.1
LIG1-212ENST00000596549 ZBTB8OSQ8IWT0 167 aa14.44□□□□□ -0.1
LIG1-212ENST00000596549 COLGALT2Q8IYK4 626 aa14.44□□□□□ -0.1
LIG1-212ENST00000596549 RNF168Q8IYW5 571 aaPredicted RBP14.44□□□□□ -0.1
LIG1-212ENST00000596549 C1QTNF1Q9BXJ1 281 aa14.44□□□□□ -0.1
LIG1-212ENST00000596549 S1PR5Q9H228 398 aa14.44□□□□□ -0.1
LIG1-212ENST00000596549 PDZD7Q9H5P4 517 aa14.44□□□□□ -0.1
LIG1-212ENST00000596549 PRMT7Q9NVM4 692 aaPredicted RBP14.44□□□□□ -0.1
LIG1-212ENST00000596549 IRAK3Q9Y616 596 aa14.44□□□□□ -0.1
LIG1-212ENST00000596549 ZMYM2Q9UBW7 1377 aa14.44□□□□□ -0.1
LIG1-212ENST00000596549 KMT2EQ8IZD2 1858 aa14.44□□□□□ -0.1
LIG1-212ENST00000596549 EFEMP2O95967 443 aa14.43□□□□□ -0.1
LIG1-212ENST00000596549 PRKCBP05771 671 aa14.43□□□□□ -0.1
LIG1-212ENST00000596549 COL9A1P20849 921 aa14.43□□□□□ -0.1
LIG1-212ENST00000596549 CA8P35219 290 aa14.43□□□□□ -0.1
LIG1-212ENST00000596549 MAPK7Q13164 816 aa14.43□□□□□ -0.1
LIG1-212ENST00000596549 CUL4AQ13619 759 aa14.43□□□□□ -0.1
LIG1-212ENST00000596549 DAW1Q8N136 415 aa14.43□□□□□ -0.1
LIG1-212ENST00000596549 FEZF2Q8TBJ5 459 aa14.43□□□□□ -0.1
LIG1-212ENST00000596549 POP1Q99575 1024 aaKnown RBP14.43□□□□□ -0.1
LIG1-212ENST00000596549 RUSC1Q9BVN2 902 aa14.43□□□□□ -0.1
LIG1-212ENST00000596549 APOL5Q9BWW9 433 aa14.43□□□□□ -0.1
LIG1-212ENST00000596549 RAB34Q9BZG1 259 aa14.43□□□□□ -0.1
LIG1-212ENST00000596549 TRIM6Q9C030 488 aaPredicted RBP14.43□□□□□ -0.1
LIG1-212ENST00000596549 C2orf40Q9H1Z8 148 aa14.43□□□□□ -0.1
LIG1-212ENST00000596549 UBN1Q9NPG3 1134 aa14.43□□□□□ -0.1
LIG1-212ENST00000596549 KANSL3Q9P2N6 904 aa14.43□□□□□ -0.1
LIG1-212ENST00000596549 SMC3Q9UQE7 1217 aa14.43□□□□□ -0.1
LIG1-212ENST00000596549 GIT1Q9Y2X7 761 aa14.43□□□□□ -0.1
LIG1-212ENST00000596549 PRG3Q9Y2Y8 225 aaPredicted RBP14.43□□□□□ -0.1
LIG1-212ENST00000596549 CARNS1A5YM72 827 aa14.42□□□□□ -0.1
LIG1-212ENST00000596549 H3BQV1 296 aa14.42□□□□□ -0.1
LIG1-212ENST00000596549 NCBP1Q09161 790 aaKnown RBP14.42□□□□□ -0.1
LIG1-212ENST00000596549 HYIQ5T013 277 aa14.42□□□□□ -0.1
LIG1-212ENST00000596549 EEF1DP3Q658K8 133 aa14.42□□□□□ -0.1
LIG1-212ENST00000596549 DTHD1Q6ZMT9 781 aa14.42□□□□□ -0.1
LIG1-212ENST00000596549 DEPTORQ8TB45 409 aa14.42□□□□□ -0.1
LIG1-212ENST00000596549 CASP10Q92851 521 aa14.42□□□□□ -0.1
LIG1-212ENST00000596549 PNMA5Q96PV4 448 aa14.42□□□□□ -0.1
LIG1-212ENST00000596549 LRFN3Q9BTN0 628 aa14.42□□□□□ -0.1
LIG1-212ENST00000596549 HERC2P3Q9BVR0 1158 aa14.42□□□□□ -0.1
LIG1-212ENST00000596549 CXCL16Q9H2A7 254 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms