RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 RASSF8Q8NHQ8 419 aa12.29□□□□□ -0.44
VRK3-210ENST00000596121 ZFP42Q96MM3 310 aa12.29□□□□□ -0.44
VRK3-210ENST00000596121 TIPINQ9BVW5 301 aa12.29□□□□□ -0.44
VRK3-210ENST00000596121 PLVAPQ9BX97 442 aa12.29□□□□□ -0.44
VRK3-210ENST00000596121 TMEM134Q9H6X4 195 aa12.29□□□□□ -0.44
VRK3-210ENST00000596121 C17orf75Q9HAS0 396 aa12.29□□□□□ -0.44
VRK3-210ENST00000596121 PTPRHQ9HD43 1115 aa12.29□□□□□ -0.44
VRK3-210ENST00000596121 KMT5AQ9NQR1 393 aa12.29□□□□□ -0.44
VRK3-210ENST00000596121 TBC1D13Q9NVG8 400 aa12.29□□□□□ -0.44
VRK3-210ENST00000596121 RNF216Q9NWF9 866 aaPredicted RBP12.29□□□□□ -0.44
VRK3-210ENST00000596121 LMCD1Q9NZU5 365 aa12.29□□□□□ -0.44
VRK3-210ENST00000596121 STK17AQ9UEE5 414 aa12.29□□□□□ -0.44
VRK3-210ENST00000596121 CCDC39Q9UFE4 941 aa12.29□□□□□ -0.44
VRK3-210ENST00000596121 INPP5FQ9Y2H2 1132 aa12.29□□□□□ -0.44
VRK3-210ENST00000596121 PCDHGC5Q9Y5F6 944 aa12.29□□□□□ -0.44
VRK3-210ENST00000596121 UNC80Q8N2C7 3258 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 RALGAPA2Q2PPJ7 1873 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 K7ERI5 159 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 DDHD2O94830 711 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 MAPTP10636 758 aaKnown RBP12.28□□□□□ -0.44
VRK3-210ENST00000596121 ITGA4P13612 1032 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 IRS1P35568 1242 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 NCKAP1LP55160 1127 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 NCBP1Q09161 790 aaKnown RBP12.28□□□□□ -0.44
VRK3-210ENST00000596121 DMP1Q13316 513 aaPredicted RBP12.28□□□□□ -0.44
VRK3-210ENST00000596121 GLB1LQ6UWU2 654 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 DYMQ7RTS9 669 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 TMEM173Q86WV6 379 aaPredicted RBP12.28□□□□□ -0.44
VRK3-210ENST00000596121 ABI1Q8IZP0 508 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 LRRC43Q8N309 656 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 KCNG4Q8TDN1 519 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 BCL7CQ8WUZ0 217 aaPredicted RBP12.28□□□□□ -0.44
VRK3-210ENST00000596121 LEO1Q8WVC0 666 aaPredicted RBP12.28□□□□□ -0.44
VRK3-210ENST00000596121 STAMQ92783 540 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 P2RX5Q93086 422 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 DNAJC19Q96DA6 116 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 PGBD4Q96DM1 585 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 MRPL38Q96DV4 380 aaKnown RBP12.28□□□□□ -0.44
VRK3-210ENST00000596121 ZBTB45Q96K62 511 aaPredicted RBP12.28□□□□□ -0.44
VRK3-210ENST00000596121 GAD1Q99259 594 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 ACO2Q99798 780 aaKnown RBP12.28□□□□□ -0.44
VRK3-210ENST00000596121 C11orf84Q9BUA3 381 aaPredicted RBP12.28□□□□□ -0.44
VRK3-210ENST00000596121 TARS2Q9BW92 718 aaKnown RBP12.28□□□□□ -0.44
VRK3-210ENST00000596121 APOL6Q9BWW8 343 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 NRDE2Q9H7Z3 1164 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 RSAD1Q9HA92 442 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 DNAJB4Q9UDY4 337 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 ODF2LQ9ULJ1 636 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 RWDD3Q9Y3V2 267 aa12.28□□□□□ -0.44
VRK3-210ENST00000596121 A0A0C4DFX4 3053 aa12.27□□□□□ -0.44
VRK3-210ENST00000596121 ARL5CA6NH57 179 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 NT5C1B-RDH14C9J2C7 533 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 INPPL1O15357 1258 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 MEFVO15553 781 aaPredicted RBP12.27□□□□□ -0.45
VRK3-210ENST00000596121 GTPBP6O43824 516 aaPredicted RBP12.27□□□□□ -0.45
VRK3-210ENST00000596121 FGF18O76093 207 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 CSPG5O95196 566 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 POMCP01189 267 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 NMT1P30419 496 aaKnown RBP12.27□□□□□ -0.45
VRK3-210ENST00000596121 MLH1P40692 756 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 STAT6P42226 847 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 ME1P48163 572 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 BCAR1P56945 870 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 SPOUT1Q5T280 376 aaKnown RBP12.27□□□□□ -0.45
VRK3-210ENST00000596121 ATF7IP2Q5U623 682 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 RESP18Q5W5W9 173 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 KCNT2Q6UVM3 1135 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 CCDC73Q6ZRK6 1079 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 MYCT1Q8N699 235 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 DDX12PQ92771 950 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 HAPLN2Q9GZV7 340 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 SNTG2Q9NY99 539 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 KLK14Q9P0G3 267 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 CFAP45Q9UL16 551 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 TNFSF13BQ9Y275 285 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 RBM19Q9Y4C8 960 aaKnown RBP12.27□□□□□ -0.45
VRK3-210ENST00000596121 PHLPP2Q6ZVD8 1323 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 BRWD1Q9NSI6 2320 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 ATG2AQ2TAZ0 1938 aa12.27□□□□□ -0.45
VRK3-210ENST00000596121 XIRP2A4UGR9 3374 aa12.26□□□□□ -0.45
VRK3-210ENST00000596121 N4BP3O15049 544 aa12.26□□□□□ -0.45
VRK3-210ENST00000596121 FAM13AO94988 1023 aa12.26□□□□□ -0.45
VRK3-210ENST00000596121 KRT18P05783 430 aaKnown RBP12.26□□□□□ -0.45
VRK3-210ENST00000596121 GALTP07902 379 aa12.26□□□□□ -0.45
VRK3-210ENST00000596121 LAG3P18627 525 aa12.26□□□□□ -0.45
VRK3-210ENST00000596121 PROZP22891 400 aa12.26□□□□□ -0.45
VRK3-210ENST00000596121 TXLNAP40222 546 aa12.26□□□□□ -0.45
VRK3-210ENST00000596121 SLC11A1P49279 550 aa12.26□□□□□ -0.45
VRK3-210ENST00000596121 SCNN1GP51170 649 aa12.26□□□□□ -0.45
VRK3-210ENST00000596121 ERVFC1P60507 584 aa12.26□□□□□ -0.45
VRK3-210ENST00000596121 ZC2HC1CQ53FD0 456 aaPredicted RBP12.26□□□□□ -0.45
VRK3-210ENST00000596121 TCEAL5Q5H9L2 206 aa12.26□□□□□ -0.45
VRK3-210ENST00000596121 SV2BQ7L1I2 683 aa12.26□□□□□ -0.45
VRK3-210ENST00000596121 HAUS6Q7Z4H7 955 aa12.26□□□□□ -0.45
VRK3-210ENST00000596121 ZBTB33Q86T24 672 aa12.26□□□□□ -0.45
VRK3-210ENST00000596121 SLC39A11Q8N1S5 342 aa12.26□□□□□ -0.45
VRK3-210ENST00000596121 CEP120Q8N960 986 aa12.26□□□□□ -0.45
VRK3-210ENST00000596121 CNNM3Q8NE01 707 aa12.26□□□□□ -0.45
VRK3-210ENST00000596121 POF1BQ8WVV4 589 aa12.26□□□□□ -0.45
VRK3-210ENST00000596121 KCNN1Q92952 543 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms