RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 C1orf131Q8NDD1 294 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 RDM1Q8NG50 284 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 ATP6V0A1Q93050 837 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 ARL8AQ96BM9 186 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 SGSM3Q96HU1 749 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 CDHR1Q96JP9 859 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 SENP7Q9BQF6 1050 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 PACSIN1Q9BY11 444 aa18.45■□□□□ 0.54
SHKBP1-205ENST00000594973 PJA2O43164 708 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 PAX7P23759 505 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 SLC8A1P32418 973 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 GTF2BQ00403 316 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 ALCAMQ13740 583 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 LBX2Q6XYB7 198 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 OTUD6AQ7L8S5 288 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 SLC9A9Q8IVB4 645 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 PARP9Q8IXQ6 854 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 C3orf20Q8ND61 904 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 ALS2CR12Q96Q35 445 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 PSMB7Q99436 277 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 SEPT9Q9UHD8 586 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 DDX20Q9UHI6 824 aaKnown RBP18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 DICER1Q9UPY3 1922 aaKnown RBP18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 SPATA31C2B4DYI2 1134 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 KRT13P13646 458 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 SLC8A3P57103 927 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 IFFO1Q0D2I5 559 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 DMP1Q13316 513 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 TTLL12Q14166 644 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 PTGISQ16647 500 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 KIAA0753Q2KHM9 967 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 RNF187Q5TA31 235 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 TLDC1Q6P9B6 456 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 SEPT14Q6ZU15 432 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 CYFIP1Q7L576 1253 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 DNAAF5Q86Y56 855 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 TIPINQ9BVW5 301 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 LUC7LQ9NQ29 371 aaKnown RBP18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 HSPBP1Q9NZL4 362 aa18.44■□□□□ 0.54
SHKBP1-205ENST00000594973 NPTX2P47972 431 aa18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 IREB2P48200 963 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 MYL7Q01449 175 aa18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 STXBP2Q15833 593 aa18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 C9orf131Q5VYM1 1079 aa18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 NCAPG2Q86XI2 1143 aa18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 CHST13Q8NET6 341 aa18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 NOX5Q96PH1 765 aa18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 SBF1O95248 1867 aa18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 GOLGA8IPA6NC78 632 aa18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 GOLGA8JA6NMD2 632 aa18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 PDE2AO00408 941 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 GFPT2O94808 682 aa18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 FAM107AO95990 144 aa18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 YBX3P16989 372 aaKnown RBP eCLIP18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 CLNS1AP54105 237 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 NCKAP1LP55160 1127 aa18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 JAM2P57087 298 aa18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 PRKCEQ02156 737 aa18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 BSNDQ8WZ55 320 aa18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 FBXL5Q9UKA1 691 aa18.43■□□□□ 0.54
SHKBP1-205ENST00000594973 KIAA1217Q5T5P2 1943 aa18.42■□□□□ 0.54
SHKBP1-205ENST00000594973 NCK2O43639 380 aa18.42■□□□□ 0.54
SHKBP1-205ENST00000594973 GRIK3Q13003 919 aa18.42■□□□□ 0.54
SHKBP1-205ENST00000594973 DHX37Q8IY37 1157 aaKnown RBP18.42■□□□□ 0.54
SHKBP1-205ENST00000594973 XXYLT1Q8NBI6 393 aa18.42■□□□□ 0.54
SHKBP1-205ENST00000594973 TMEM161BQ8NDZ6 487 aa18.42■□□□□ 0.54
SHKBP1-205ENST00000594973 CCT8L2Q96SF2 557 aa18.42■□□□□ 0.54
SHKBP1-205ENST00000594973 INTS2Q9H0H0 1204 aaKnown RBP18.42■□□□□ 0.54
SHKBP1-205ENST00000594973 KMT5AQ9NQR1 393 aa18.42■□□□□ 0.54
SHKBP1-205ENST00000594973 TBX20Q9UMR3 447 aa18.42■□□□□ 0.54
SHKBP1-205ENST00000594973 DENND3A2RUS2 1198 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 STAM2O75886 525 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 STBD1O95210 358 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 KLRC1P26715 233 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 CXCR5P32302 372 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 SARNPP82979 210 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 CYB5D1Q6P9G0 228 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 ABHD15Q6UXT9 468 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 INTS8Q75QN2 995 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 NLRP14Q86W24 1093 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 CD302Q8IX05 232 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 MYCBPAPQ8TBZ2 947 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 ZNF526Q8TF50 670 aaPredicted RBP18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 DNAJC12Q9UKB3 198 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 BZW2Q9Y6E2 419 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 NFASCO94856 1347 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 EMSYQ7Z589 1322 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 DOCK5Q9H7D0 1870 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 KLHL33A6NCF5 533 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 PRLRP16471 622 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 GCLMP48507 274 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 VAMP7P51809 220 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 C2orf54Q08AI8 447 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 MYBPC2Q14324 1141 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 MIS18BP1Q6P0N0 1132 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 NFRKBQ6P4R8 1299 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 FUKQ8N0W3 1084 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 SAAL1Q96ER3 474 aa18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 RNPC3Q96LT9 517 aaKnown RBP18.41■□□□□ 0.54
SHKBP1-205ENST00000594973 CCDC114Q96M63 670 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms