RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 SLFN12LQ6IEE8 588 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 CHADLQ6NUI6 762 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 ZNF571Q7Z3V5 609 aaPredicted RBP12.95□□□□□ -0.34
NPC1-214ENST00000593280 ZNF710Q8N1W2 664 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 PARD3BQ8TEW8 1205 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 ANKRD7Q92527 254 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 VTI1AQ96AJ9 217 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 FAM213AQ9BRX8 229 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 TMEM117Q9H0C3 514 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 TMEM8AQ9HCN3 771 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 ERAP1Q9NZ08 941 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 ADAMTS1Q9UHI8 967 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 STYXL1Q9Y6J8 313 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 ZSWIM8A7E2V4 1837 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 ZNF233A6NK53 670 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 EFCAB8A8MWE9 144 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 ADCY3O60266 1144 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 HBP1O60381 514 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 EVI5O60447 810 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 TADA3O75528 432 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 ITGBL1O95965 494 aaPredicted RBP12.95□□□□□ -0.34
NPC1-214ENST00000593280 CCDC172P0C7W6 258 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 PNMA6AP0CW24 399 aaPredicted RBP12.95□□□□□ -0.34
NPC1-214ENST00000593280 GTF2H1P32780 548 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 EFNA5P52803 228 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 RBM10P98175 930 aaKnown RBP12.95□□□□□ -0.34
NPC1-214ENST00000593280 MAP2K1Q02750 393 aaPredicted RBP12.95□□□□□ -0.34
NPC1-214ENST00000593280 DRP2Q13474 957 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 MXD4Q14582 209 aaPredicted RBP12.95□□□□□ -0.34
NPC1-214ENST00000593280 C10orf76Q5T2E6 689 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 KRT39Q6A163 491 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 PHLDB3Q6NSJ2 640 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 MAMDC4Q6UXC1 1216 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 RASAL3Q86YV0 1011 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 TRIM58Q8NG06 486 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 PRPF31Q8WWY3 499 aaKnown RBP12.95□□□□□ -0.34
NPC1-214ENST00000593280 PSPC1Q8WXF1 523 aaKnown RBP12.95□□□□□ -0.34
NPC1-214ENST00000593280 MAML3Q96JK9 1138 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 ALS2CR12Q96Q35 445 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 SUGCTQ9HAC7 445 aa12.95□□□□□ -0.34
NPC1-214ENST00000593280 AGO2Q9UKV8 859 aaKnown RBP12.95□□□□□ -0.34
NPC1-214ENST00000593280 IGKV6-21A0A0C4DH24 114 aa12.94□□□□□ -0.34
NPC1-214ENST00000593280 ANO9A1A5B4 782 aa12.94□□□□□ -0.34
NPC1-214ENST00000593280 SLC15A5A6NIM6 579 aa12.94□□□□□ -0.34
NPC1-214ENST00000593280 MOCS3O95396 460 aa12.94□□□□□ -0.34
NPC1-214ENST00000593280 SNAI1O95863 264 aaPredicted RBP12.94□□□□□ -0.34
NPC1-214ENST00000593280 LGALS2P05162 132 aa12.94□□□□□ -0.34
NPC1-214ENST00000593280 MATR3P43243 847 aaKnown RBP eCLIP12.94□□□□□ -0.34
NPC1-214ENST00000593280 ZNF157P51786 506 aaPredicted RBP12.94□□□□□ -0.34
NPC1-214ENST00000593280 LAMTOR4Q0VGL1 99 aa12.94□□□□□ -0.34
NPC1-214ENST00000593280 ELF2Q15723 593 aa12.94□□□□□ -0.34
NPC1-214ENST00000593280 ARHGAP44Q17R89 818 aa12.94□□□□□ -0.34
NPC1-214ENST00000593280 WHAMMP3Q1A5X7 153 aa12.94□□□□□ -0.34
NPC1-214ENST00000593280 GJC2Q5T442 439 aaPredicted RBP12.94□□□□□ -0.34
NPC1-214ENST00000593280 CDCA2Q69YH5 1023 aaPredicted RBP12.94□□□□□ -0.34
NPC1-214ENST00000593280 ARHGEF19Q8IW93 802 aa12.94□□□□□ -0.34
NPC1-214ENST00000593280 ZBTB8OSQ8IWT0 167 aa12.94□□□□□ -0.34
NPC1-214ENST00000593280 CEP112Q8N8E3 955 aa12.94□□□□□ -0.34
NPC1-214ENST00000593280 PPTC7Q8NI37 304 aa12.94□□□□□ -0.34
NPC1-214ENST00000593280 EMID1Q96A84 441 aaPredicted RBP12.94□□□□□ -0.34
NPC1-214ENST00000593280 GPR88Q9GZN0 384 aa12.94□□□□□ -0.34
NPC1-214ENST00000593280 KATNBL1Q9H079 304 aa12.94□□□□□ -0.34
NPC1-214ENST00000593280 UBE2TQ9NPD8 197 aaPredicted RBP12.94□□□□□ -0.34
NPC1-214ENST00000593280 ANKFY1Q9P2R3 1169 aa12.94□□□□□ -0.34
NPC1-214ENST00000593280 USP20Q9Y2K6 914 aa12.94□□□□□ -0.34
NPC1-214ENST00000593280 ATP8B3O60423 1300 aa12.93□□□□□ -0.34
NPC1-214ENST00000593280 ADGRA2Q96PE1 1338 aa12.93□□□□□ -0.34
NPC1-214ENST00000593280 MANSC4A6NHS7 340 aaPredicted RBP12.93□□□□□ -0.34
NPC1-214ENST00000593280 ATP1A1P05023 1023 aaKnown RBP12.93□□□□□ -0.34
NPC1-214ENST00000593280 DLATP10515 647 aaKnown RBP12.93□□□□□ -0.34
NPC1-214ENST00000593280 ADCYAP1R1P41586 468 aa12.93□□□□□ -0.34
NPC1-214ENST00000593280 AMPD2Q01433 879 aa12.93□□□□□ -0.34
NPC1-214ENST00000593280 MKRN4PQ13434 485 aaPredicted RBP12.93□□□□□ -0.34
NPC1-214ENST00000593280 BMS1Q14692 1282 aaKnown RBP12.93□□□□□ -0.34
NPC1-214ENST00000593280 TRAPPC11Q7Z392 1133 aa12.93□□□□□ -0.34
NPC1-214ENST00000593280 LRRC71Q8N4P6 559 aa12.93□□□□□ -0.34
NPC1-214ENST00000593280 RNF10Q8N5U6 811 aaKnown RBP12.93□□□□□ -0.34
NPC1-214ENST00000593280 TRAPPC12Q8WVT3 735 aa12.93□□□□□ -0.34
NPC1-214ENST00000593280 UBXN4Q92575 508 aa12.93□□□□□ -0.34
NPC1-214ENST00000593280 NOX5Q96PH1 765 aa12.93□□□□□ -0.34
NPC1-214ENST00000593280 MSTO1Q9BUK6 570 aa12.93□□□□□ -0.34
NPC1-214ENST00000593280 TARS2Q9BW92 718 aaKnown RBP12.93□□□□□ -0.34
NPC1-214ENST00000593280 C2orf40Q9H1Z8 148 aa12.93□□□□□ -0.34
NPC1-214ENST00000593280 ZCCHC17Q9NP64 241 aaKnown RBP12.93□□□□□ -0.34
NPC1-214ENST00000593280 TOPORSQ9NS56 1045 aaPredicted RBP12.93□□□□□ -0.34
NPC1-214ENST00000593280 SLC5A4Q9NY91 659 aa12.93□□□□□ -0.34
NPC1-214ENST00000593280 SUCLA2Q9P2R7 463 aaPredicted RBP12.93□□□□□ -0.34
NPC1-214ENST00000593280 CPA4Q9UI42 421 aa12.93□□□□□ -0.34
NPC1-214ENST00000593280 CAPN6Q9Y6Q1 641 aa12.93□□□□□ -0.34
NPC1-214ENST00000593280 ENC1O14682 589 aa12.92□□□□□ -0.34
NPC1-214ENST00000593280 LRRN2O75325 713 aa12.92□□□□□ -0.34
NPC1-214ENST00000593280 LDHAP00338 332 aaKnown RBP12.92□□□□□ -0.34
NPC1-214ENST00000593280 NLRP11P59045 1033 aaKnown RBP12.92□□□□□ -0.34
NPC1-214ENST00000593280 TFDP1Q14186 410 aa12.92□□□□□ -0.34
NPC1-214ENST00000593280 KIF22Q14807 665 aa12.92□□□□□ -0.34
NPC1-214ENST00000593280 PSMD6Q15008 389 aa12.92□□□□□ -0.34
NPC1-214ENST00000593280 NAB2Q15742 525 aa12.92□□□□□ -0.34
NPC1-214ENST00000593280 KIAA0753Q2KHM9 967 aa12.92□□□□□ -0.34
NPC1-214ENST00000593280 ERCC6LQ2NKX8 1250 aa12.92□□□□□ -0.34
NPC1-214ENST00000593280 ZNF484Q5JVG2 852 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms