RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 SYCE1Q8N0S2 351 aa21.32■■□□□ 1
CLIP3-206ENST00000593074 TMC2Q8TDI7 906 aa21.32■■□□□ 1
CLIP3-206ENST00000593074 AENQ8WTP8 325 aaKnown RBP21.32■■□□□ 1
CLIP3-206ENST00000593074 OPTNQ96CV9 577 aa21.32■■□□□ 1
CLIP3-206ENST00000593074 SAAL1Q96ER3 474 aa21.32■■□□□ 1
CLIP3-206ENST00000593074 GOLPH3Q9H4A6 298 aa21.32■■□□□ 1
CLIP3-206ENST00000593074 COQ4Q9Y3A0 265 aa21.32■■□□□ 1
CLIP3-206ENST00000593074 SOWAHBA6NEL2 793 aa21.31■■□□□ 1
CLIP3-206ENST00000593074 CNMDO75829 334 aa21.31■■□□□ 1
CLIP3-206ENST00000593074 SLC25A27O95847 323 aa21.31■■□□□ 1
CLIP3-206ENST00000593074 ABCD1P33897 745 aa21.31■■□□□ 1
CLIP3-206ENST00000593074 ENPEPQ07075 957 aa21.31■■□□□ 1
CLIP3-206ENST00000593074 EAPPQ56P03 285 aaPredicted RBP21.31■■□□□ 1
CLIP3-206ENST00000593074 BRDTQ58F21 947 aaPredicted RBP21.31■■□□□ 1
CLIP3-206ENST00000593074 FASTKD5Q7L8L6 764 aaKnown RBP21.31■■□□□ 1
CLIP3-206ENST00000593074 KCNN1Q92952 543 aa21.31■■□□□ 1
CLIP3-206ENST00000593074 PBKQ96KB5 322 aa21.31■■□□□ 1
CLIP3-206ENST00000593074 MFSD14AQ96MC6 490 aa21.31■■□□□ 1
CLIP3-206ENST00000593074 ACBD3Q9H3P7 528 aa21.31■■□□□ 1
CLIP3-206ENST00000593074 STXBP5LQ9Y2K9 1186 aa21.31■■□□□ 1
CLIP3-206ENST00000593074 MAFBQ9Y5Q3 323 aaPredicted RBP21.31■■□□□ 1
CLIP3-206ENST00000593074 MYH9P35579 1960 aaKnown RBP21.31■■□□□ 1
CLIP3-206ENST00000593074 SYNGAP1Q96PV0 1343 aa21.3■■□□□ 1
CLIP3-206ENST00000593074 H0YCG3 227 aa21.3■■□□□ 1
CLIP3-206ENST00000593074 POLR3GO15318 223 aaPredicted RBP21.3■■□□□ 1
CLIP3-206ENST00000593074 TNFAIP3P21580 790 aa21.3■■□□□ 1
CLIP3-206ENST00000593074 EDNRBP24530 442 aa21.3■■□□□ 1
CLIP3-206ENST00000593074 TAS1R3Q7RTX0 852 aa21.3■■□□□ 1
CLIP3-206ENST00000593074 GSPT2Q8IYD1 628 aaKnown RBP21.3■■□□□ 1
CLIP3-206ENST00000593074 USP38Q8NB14 1042 aa21.3■■□□□ 1
CLIP3-206ENST00000593074 ZNF526Q8TF50 670 aaPredicted RBP21.3■■□□□ 1
CLIP3-206ENST00000593074 AGPAT1Q99943 283 aa21.3■■□□□ 1
CLIP3-206ENST00000593074 POLR3FQ9H1D9 316 aaPredicted RBP21.3■■□□□ 1
CLIP3-206ENST00000593074 TMEM8AQ9HCN3 771 aa21.3■■□□□ 1
CLIP3-206ENST00000593074 SUCLA2Q9P2R7 463 aaPredicted RBP21.3■■□□□ 1
CLIP3-206ENST00000593074 GLTPD2A6NH11 291 aa21.3■■□□□ 1
CLIP3-206ENST00000593074 KCNK3O14649 394 aa21.3■■□□□ 1
CLIP3-206ENST00000593074 OSBPP22059 807 aa21.3■■□□□ 1
CLIP3-206ENST00000593074 GARTP22102 1010 aa21.3■■□□□ 1
CLIP3-206ENST00000593074 KRT39Q6A163 491 aa21.3■■□□□ 1
CLIP3-206ENST00000593074 CTNNBL1Q8WYA6 563 aaPredicted RBP21.3■■□□□ 1
CLIP3-206ENST00000593074 IFT74Q96LB3 600 aa21.3■■□□□ 1
CLIP3-206ENST00000593074 SELENOOQ9BVL4 669 aa21.3■■□□□ 1
CLIP3-206ENST00000593074 TMEM59LQ9UK28 342 aa21.3■■□□□ 1
CLIP3-206ENST00000593074 LRRC37A2A6NM11 1700 aa21.29■■□□□ 1
CLIP3-206ENST00000593074 HNRNPDLO14979 420 aaKnown RBP21.29■■□□□ 1
CLIP3-206ENST00000593074 ATP4AP20648 1035 aa21.29■■□□□ 1
CLIP3-206ENST00000593074 GTF2H1P32780 548 aa21.29■■□□□ 1
CLIP3-206ENST00000593074 COPB2P35606 906 aa21.29■■□□□ 1
CLIP3-206ENST00000593074 TNNT3P45378 269 aaPredicted RBP21.29■■□□□ 1
CLIP3-206ENST00000593074 MAP2K1Q02750 393 aaPredicted RBP21.29■■□□□ 1
CLIP3-206ENST00000593074 CYP24A1Q07973 514 aa21.29■■□□□ 1
CLIP3-206ENST00000593074 EMC2Q15006 297 aa21.29■■□□□ 1
CLIP3-206ENST00000593074 PEX26Q7Z412 305 aa21.29■■□□□ 1
CLIP3-206ENST00000593074 NT5DC3Q86UY8 548 aa21.29■■□□□ 1
CLIP3-206ENST00000593074 PALB2Q86YC2 1186 aa21.29■■□□□ 1
CLIP3-206ENST00000593074 ACTRT1Q8TDG2 376 aa21.29■■□□□ 1
CLIP3-206ENST00000593074 POMGNT1Q8WZA1 660 aa21.29■■□□□ 1
CLIP3-206ENST00000593074 TAF1DQ9H5J8 278 aaPredicted RBP21.29■■□□□ 1
CLIP3-206ENST00000593074 ZCCHC17Q9NP64 241 aaKnown RBP21.29■■□□□ 1
CLIP3-206ENST00000593074 ZNF302Q9NR11 478 aa21.29■■□□□ 1
CLIP3-206ENST00000593074 RBPJLQ9UBG7 517 aa21.29■■□□□ 1
CLIP3-206ENST00000593074 HPCAL4Q9UM19 191 aa21.29■■□□□ 1
CLIP3-206ENST00000593074 ANKRD62A6NC57 917 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 OATP04181 439 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 AARSP49588 968 aaKnown RBP eCLIP21.28■■□□□ 1
CLIP3-206ENST00000593074 GPC3P51654 580 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 MOGSQ13724 837 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 MTERF2Q49AM1 385 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 DAAM2Q86T65 1068 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 USP37Q86T82 979 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 FAM71AQ8IYT1 594 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 SLC35G2Q8TBE7 412 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 SLC20A1Q8WUM9 679 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 SEMA4DQ92854 862 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 TAS2R14Q9NYV8 317 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 KCNG1Q9UIX4 513 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 SIP14410 1827 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 ZC3H4Q9UPT8 1303 aaKnown RBP21.28■■□□□ 1
CLIP3-206ENST00000593074 IGKV6D-21A0A0A0MT36 114 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 TMCO5BA8MYB1 307 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 SLC7A5Q01650 507 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 GPD1LQ8N335 351 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 SHC3Q92529 594 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 KAT5Q92993 513 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 CCDC127Q96BQ5 260 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 HES6Q96HZ4 224 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 KREMEN1Q96MU8 473 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 OSGEPQ9NPF4 335 aa21.28■■□□□ 1
CLIP3-206ENST00000593074 SCP2P22307 547 aa21.27■■□□□ 1
CLIP3-206ENST00000593074 MPHOSPH6Q99547 160 aaKnown RBP21.27■■□□□ 1
CLIP3-206ENST00000593074 DHX33Q9H6R0 707 aaKnown RBP21.27■■□□□ 1
CLIP3-206ENST00000593074 TXNRD2Q9NNW7 524 aa21.27■■□□□ 1
CLIP3-206ENST00000593074 MED4Q9NPJ6 270 aa21.27■■□□□ 1
CLIP3-206ENST00000593074 IQCA1LA6NCM1 817 aa21.27■□□□□ 0.99
CLIP3-206ENST00000593074 BUB1BO60566 1050 aaPredicted RBP21.27■□□□□ 0.99
CLIP3-206ENST00000593074 TGFB3P10600 412 aa21.27■□□□□ 0.99
CLIP3-206ENST00000593074 ABCB4P21439 1286 aa21.27■□□□□ 0.99
CLIP3-206ENST00000593074 UBA1P22314 1058 aaKnown RBP21.27■□□□□ 0.99
CLIP3-206ENST00000593074 POLGP54098 1239 aaPredicted RBP21.27■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms