RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 CCDC63Q8NA47 563 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 MTFR1LQ9H019 292 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 ATP6V0A4Q9HBG4 840 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 NOD2Q9HC29 1040 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 AFF2P51816 1311 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 SPATA31A6Q5VVP1 1343 aa15.99■□□□□ 0.15
SMARCA4-219ENST00000592604 SMIM23A6NLE4 172 aa15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 TTC36A6NLP5 189 aa15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 LRRN2O75325 713 aa15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 COMTP21964 271 aa15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 COILP38432 576 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 CRELD2Q6UXH1 353 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 TEKT1Q969V4 418 aa15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 TAOK3Q9H2K8 898 aa15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 ADAMTSL1Q8N6G6 1762 aa15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 ZBTB39O15060 712 aa15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 RTN2O75298 545 aa15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 ADRA2BP18089 450 aa15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 HOXA13P31271 388 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 TLDC1Q6P9B6 456 aa15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 P4HA2O15460 535 aa15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 SNX3O60493 162 aa15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 EXOC3O60645 756 aa15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 OAS1P00973 400 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 VIMP08670 466 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 FGFR4P22455 802 aa15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 PDE6CP51160 858 aa15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 SLC13A5Q86YT5 568 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 C12orf50Q8NA57 414 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 SLC5A5Q92911 643 aa15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 WDR18Q9BV38 432 aa15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 VEZTQ9HBM0 779 aa15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 UBE2TQ9NPD8 197 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-219ENST00000592604 PYGMP11217 842 aa15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 GZMAP12544 262 aa15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 ICA1Q05084 483 aa15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 SIX1Q15475 284 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 VPS72Q15906 364 aa15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 ODR4Q5SWX8 454 aa15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 TATDN1Q6P1N9 297 aa15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 TRMT10CQ7L0Y3 403 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 EXOC3L1Q86VI1 746 aa15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 TMEM174Q8WUU8 243 aa15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 NACC1Q96RE7 527 aa15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 MTUS1Q9ULD2 1270 aa15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 SUFUQ9UMX1 484 aa15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 RBBP6Q7Z6E9 1792 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 KLRG2A4D1S0 409 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 KIF1CO43896 1103 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 LRCH2Q5VUJ6 765 aa15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 RPUSD2Q8IZ73 545 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 N4BP2L2Q92802 583 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 HOOK2Q96ED9 719 aa15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 PI4KBQ9UBF8 816 aa15.97■□□□□ 0.15
SMARCA4-219ENST00000592604 PASKQ96RG2 1323 aa15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 FAM196BA6NMK8 535 aa15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 ANKRD63C9JTQ0 380 aa15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 NDUFB10O96000 172 aa15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 GYS1P13807 737 aa15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 PRELPP51888 382 aa15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 MESDQ14696 234 aa15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 E2F5Q15329 346 aa15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 TMEM179Q6ZVK1 233 aa15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 UHMK1Q8TAS1 419 aaKnown RBP15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 HOMER3Q9NSC5 361 aa15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 DBR1Q9UK59 544 aaKnown RBP15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 SMCHD1A6NHR9 2005 aa15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 TMEM110-MUSTN1A8MSY1 372 aa15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 SLCO1A2P46721 670 aa15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 ZNF268Q14587 947 aaPredicted RBP15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 EPC2Q52LR7 807 aa15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 INTS8Q75QN2 995 aaKnown RBP15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 ARHGEF19Q8IW93 802 aa15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 CCDC105Q8IYK2 499 aa15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 ZNF513Q8N8E2 541 aaPredicted RBP15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 SLCO2A1Q92959 643 aa15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 PCDHB18PQ96TA0 734 aa15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 LRRC19Q9H756 370 aa15.96■□□□□ 0.15
SMARCA4-219ENST00000592604 EMSYQ7Z589 1322 aa15.96■□□□□ 0.14
SMARCA4-219ENST00000592604 TCRBV7S2A1N4TA0A589 114 aa15.95■□□□□ 0.14
SMARCA4-219ENST00000592604 DDTLA6NHG4 134 aaPredicted RBP15.95■□□□□ 0.14
SMARCA4-219ENST00000592604 RARAP10276 462 aa15.95■□□□□ 0.14
SMARCA4-219ENST00000592604 CETN1Q12798 172 aa15.95■□□□□ 0.14
SMARCA4-219ENST00000592604 SLC30A10Q6XR72 485 aa15.95■□□□□ 0.14
SMARCA4-219ENST00000592604 ZC3H12CQ9C0D7 883 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-219ENST00000592604 BAIAP2L1Q9UHR4 511 aa15.95■□□□□ 0.14
SMARCA4-219ENST00000592604 FAM170AA1A519 330 aa15.95■□□□□ 0.14
SMARCA4-219ENST00000592604 TAL1P17542 331 aaPredicted RBP15.95■□□□□ 0.14
SMARCA4-219ENST00000592604 CHRNB2P17787 502 aa15.95■□□□□ 0.14
SMARCA4-219ENST00000592604 DLG4P78352 724 aa15.95■□□□□ 0.14
SMARCA4-219ENST00000592604 GALNTL6Q49A17 601 aa15.95■□□□□ 0.14
SMARCA4-219ENST00000592604 RDH13Q8NBN7 331 aa15.95■□□□□ 0.14
SMARCA4-219ENST00000592604 SERPINB12Q96P63 405 aa15.95■□□□□ 0.14
SMARCA4-219ENST00000592604 ABCF3Q9NUQ8 709 aa15.95■□□□□ 0.14
SMARCA4-219ENST00000592604 USP20Q9Y2K6 914 aa15.95■□□□□ 0.14
SMARCA4-219ENST00000592604 LOXHD1Q8IVV2 1947 aa15.95■□□□□ 0.14
SMARCA4-219ENST00000592604 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-219ENST00000592604 PPEF1O14829 653 aaPredicted RBP15.95■□□□□ 0.14
SMARCA4-219ENST00000592604 BMP3P12645 472 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms