RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 UVSSAQ2YD98 709 aa19.3■□□□□ 0.68
CIRBP-235ENST00000591935 NOMO2Q5JPE7 1267 aa19.3■□□□□ 0.68
CIRBP-235ENST00000591935 TMEM184AQ6ZMB5 413 aa19.3■□□□□ 0.68
CIRBP-235ENST00000591935 AGMOQ6ZNB7 445 aa19.3■□□□□ 0.68
CIRBP-235ENST00000591935 TMEM173Q86WV6 379 aaPredicted RBP19.3■□□□□ 0.68
CIRBP-235ENST00000591935 CNNM3Q8NE01 707 aa19.3■□□□□ 0.68
CIRBP-235ENST00000591935 ASAP3Q8TDY4 903 aa19.3■□□□□ 0.68
CIRBP-235ENST00000591935 RBSNQ9H1K0 784 aa19.3■□□□□ 0.68
CIRBP-235ENST00000591935 FOXP1Q9H334 677 aaPredicted RBP19.3■□□□□ 0.68
CIRBP-235ENST00000591935 NRDE2Q9H7Z3 1164 aa19.3■□□□□ 0.68
CIRBP-235ENST00000591935 STK39Q9UEW8 545 aa19.3■□□□□ 0.68
CIRBP-235ENST00000591935 INPP5FQ9Y2H2 1132 aa19.3■□□□□ 0.68
CIRBP-235ENST00000591935 FAM86C2PA6NEL3 165 aa19.29■□□□□ 0.68
CIRBP-235ENST00000591935 B4GALT3O60512 393 aa19.29■□□□□ 0.68
CIRBP-235ENST00000591935 MED24O75448 989 aa19.29■□□□□ 0.68
CIRBP-235ENST00000591935 ERLIN2O94905 339 aa19.29■□□□□ 0.68
CIRBP-235ENST00000591935 YEATS4O95619 227 aa19.29■□□□□ 0.68
CIRBP-235ENST00000591935 AXLP30530 894 aa19.29■□□□□ 0.68
CIRBP-235ENST00000591935 ARL2P36404 184 aa19.29■□□□□ 0.68
CIRBP-235ENST00000591935 TECP42680 631 aa19.29■□□□□ 0.68
CIRBP-235ENST00000591935 PTENP60484 403 aa19.29■□□□□ 0.68
CIRBP-235ENST00000591935 RNASELQ05823 741 aaKnown RBP19.29■□□□□ 0.68
CIRBP-235ENST00000591935 CCDC173Q0VFZ6 552 aa19.29■□□□□ 0.68
CIRBP-235ENST00000591935 KCNC3Q14003 757 aa19.29■□□□□ 0.68
CIRBP-235ENST00000591935 MRPL10Q7Z7H8 261 aaKnown RBP19.29■□□□□ 0.68
CIRBP-235ENST00000591935 CATSPER3Q86XQ3 398 aa19.29■□□□□ 0.68
CIRBP-235ENST00000591935 URGCPQ8TCY9 931 aa19.29■□□□□ 0.68
CIRBP-235ENST00000591935 CCDC51Q96ER9 411 aa19.29■□□□□ 0.68
CIRBP-235ENST00000591935 TBC1D13Q9NVG8 400 aa19.29■□□□□ 0.68
CIRBP-235ENST00000591935 KANSL3Q9P2N6 904 aa19.29■□□□□ 0.68
CIRBP-235ENST00000591935 HCN4Q9Y3Q4 1203 aa19.29■□□□□ 0.68
CIRBP-235ENST00000591935 CNTNAP2Q9UHC6 1331 aa19.28■□□□□ 0.68
CIRBP-235ENST00000591935 ZC3H11AO75152 810 aaKnown RBP eCLIP19.28■□□□□ 0.685e-7■■□□□ 11.8
CIRBP-235ENST00000591935 GLRA2P23416 452 aa19.28■□□□□ 0.68
CIRBP-235ENST00000591935 CAPSQ13938 189 aa19.28■□□□□ 0.68
CIRBP-235ENST00000591935 GIT2Q14161 759 aa19.28■□□□□ 0.68
CIRBP-235ENST00000591935 ZNF280BQ86YH2 543 aa19.28■□□□□ 0.68
CIRBP-235ENST00000591935 MRPL43Q8N983 215 aaKnown RBP19.28■□□□□ 0.68
CIRBP-235ENST00000591935 BCL7CQ8WUZ0 217 aaPredicted RBP19.28■□□□□ 0.68
CIRBP-235ENST00000591935 PPP1R9BQ96SB3 815 aa19.28■□□□□ 0.68
CIRBP-235ENST00000591935 UBN1Q9NPG3 1134 aa19.28■□□□□ 0.68
CIRBP-235ENST00000591935 DNAJB4Q9UDY4 337 aa19.28■□□□□ 0.68
CIRBP-235ENST00000591935 ARIH1Q9Y4X5 557 aaPredicted RBP19.28■□□□□ 0.68
CIRBP-235ENST00000591935 PRR33A8MZF0 331 aa19.27■□□□□ 0.68
CIRBP-235ENST00000591935 TSPAN1O60635 241 aa19.27■□□□□ 0.68
CIRBP-235ENST00000591935 DDHD2O94830 711 aa19.27■□□□□ 0.68
CIRBP-235ENST00000591935 GALTP07902 379 aa19.27■□□□□ 0.68
CIRBP-235ENST00000591935 OR52Z1P0C646 297 aa19.27■□□□□ 0.68
CIRBP-235ENST00000591935 HOXB8P17481 243 aaPredicted RBP19.27■□□□□ 0.68
CIRBP-235ENST00000591935 GNL2Q13823 731 aaKnown RBP19.27■□□□□ 0.68
CIRBP-235ENST00000591935 MAEAQ7L5Y9 396 aa19.27■□□□□ 0.68
CIRBP-235ENST00000591935 IFNLR1Q8IU57 520 aaPredicted RBP19.27■□□□□ 0.68
CIRBP-235ENST00000591935 C4orf32Q8N8J7 132 aa19.27■□□□□ 0.68
CIRBP-235ENST00000591935 SMG8Q8ND04 991 aaKnown RBP19.27■□□□□ 0.68
CIRBP-235ENST00000591935 CASP10Q92851 521 aa19.27■□□□□ 0.68
CIRBP-235ENST00000591935 CPB2Q96IY4 423 aa19.27■□□□□ 0.68
CIRBP-235ENST00000591935 USP28Q96RU2 1077 aa19.27■□□□□ 0.68
CIRBP-235ENST00000591935 EIF2AQ9BY44 585 aaKnown RBP19.27■□□□□ 0.68
CIRBP-235ENST00000591935 PANK2Q9BZ23 570 aa19.27■□□□□ 0.68
CIRBP-235ENST00000591935 GBP3Q9H0R5 595 aa19.27■□□□□ 0.68
CIRBP-235ENST00000591935 TUFT1Q9NNX1 390 aa19.27■□□□□ 0.68
CIRBP-235ENST00000591935 GPRC5CQ9NQ84 441 aa19.27■□□□□ 0.68
CIRBP-235ENST00000591935 USP15Q9Y4E8 981 aaPredicted RBP19.27■□□□□ 0.68
CIRBP-235ENST00000591935 TDRD15B5MCY1 1934 aaKnown RBP19.26■□□□□ 0.67
CIRBP-235ENST00000591935 MYH15Q9Y2K3 1946 aa19.26■□□□□ 0.67
CIRBP-235ENST00000591935 INO80B-WBP1J3KQ70 363 aa19.26■□□□□ 0.67
CIRBP-235ENST00000591935 USO1O60763 962 aaKnown RBP19.26■□□□□ 0.67
CIRBP-235ENST00000591935 SLC11A1P49279 550 aa19.26■□□□□ 0.67
CIRBP-235ENST00000591935 MBTD1Q05BQ5 628 aa19.26■□□□□ 0.67
CIRBP-235ENST00000591935 AMHR2Q16671 573 aa19.26■□□□□ 0.67
CIRBP-235ENST00000591935 TTC38Q5R3I4 469 aa19.26■□□□□ 0.67
CIRBP-235ENST00000591935 ANKRD54Q6NXT1 300 aa19.26■□□□□ 0.67
CIRBP-235ENST00000591935 LLGL2Q6P1M3 1020 aa19.26■□□□□ 0.67
CIRBP-235ENST00000591935 NOTUMQ6P988 496 aa19.26■□□□□ 0.67
CIRBP-235ENST00000591935 NOSTRINQ8IVI9 506 aa19.26■□□□□ 0.67
CIRBP-235ENST00000591935 ERMNQ8TAM6 284 aa19.26■□□□□ 0.67
CIRBP-235ENST00000591935 KCNG4Q8TDN1 519 aa19.26■□□□□ 0.67
CIRBP-235ENST00000591935 FAM193BQ96PV7 902 aaPredicted RBP19.26■□□□□ 0.67
CIRBP-235ENST00000591935 PHF7Q9BWX1 381 aaPredicted RBP19.26■□□□□ 0.67
CIRBP-235ENST00000591935 NFKBIZQ9BYH8 718 aa19.26■□□□□ 0.67
CIRBP-235ENST00000591935 NUP62CLQ9H1M0 184 aa19.26■□□□□ 0.67
CIRBP-235ENST00000591935 RNF39Q9H2S5 420 aa19.26■□□□□ 0.67
CIRBP-235ENST00000591935 RSAD1Q9HA92 442 aa19.26■□□□□ 0.67
CIRBP-235ENST00000591935 A0A1W2PQ27 194 aa19.25■□□□□ 0.67
CIRBP-235ENST00000591935 A0A1W2PQ64 194 aa19.25■□□□□ 0.67
CIRBP-235ENST00000591935 A0A1W2PQD8 194 aa19.25■□□□□ 0.67
CIRBP-235ENST00000591935 C2orf71A6NGG8 1288 aa19.25■□□□□ 0.67
CIRBP-235ENST00000591935 CXCL14O95715 111 aa19.25■□□□□ 0.67
CIRBP-235ENST00000591935 U2AF2P26368 475 aaKnown RBP eCLIP19.25■□□□□ 0.672e-10■□□□□ 9.2
CIRBP-235ENST00000591935 TRAPPC10P48553 1259 aa19.25■□□□□ 0.67
CIRBP-235ENST00000591935 TOB1P50616 345 aaPredicted RBP19.25■□□□□ 0.67
CIRBP-235ENST00000591935 TPRNQ4KMQ1 711 aa19.25■□□□□ 0.67
CIRBP-235ENST00000591935 SYCE2Q6PIF2 218 aa19.25■□□□□ 0.67
CIRBP-235ENST00000591935 POTEGQ6S5H5 508 aa19.25■□□□□ 0.67
CIRBP-235ENST00000591935 RBM43Q6ZSC3 357 aaKnown RBP19.25■□□□□ 0.67
CIRBP-235ENST00000591935 DDX53Q86TM3 631 aaKnown RBP19.25■□□□□ 0.67
CIRBP-235ENST00000591935 HACE1Q8IYU2 909 aa19.25■□□□□ 0.67
CIRBP-235ENST00000591935 VPS52Q8N1B4 723 aa19.25■□□□□ 0.67
CIRBP-235ENST00000591935 AUTS2Q8WXX7 1259 aa19.25■□□□□ 0.67
CIRBP-235ENST00000591935 SUSD6Q92537 303 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms