RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 EPHB4P54760 987 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 SNRPFP62306 86 aaKnown RBP13.22□□□□□ -0.29
APOC1-206ENST00000590334 MLLT1Q03111 559 aaPredicted RBP13.22□□□□□ -0.29
APOC1-206ENST00000590334 IKBKEQ14164 716 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 KNOP1Q1ED39 458 aaKnown RBP13.22□□□□□ -0.29
APOC1-206ENST00000590334 UBXN11Q5T124 520 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 ATF7IP2Q5U623 682 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 ISM2Q6H9L7 571 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 SLC39A4Q6P5W5 647 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 SLC27A1Q6PCB7 646 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 RTN4RL1Q86UN2 441 aaPredicted RBP13.22□□□□□ -0.29
APOC1-206ENST00000590334 SMYD4Q8IYR2 804 aaPredicted RBP13.22□□□□□ -0.29
APOC1-206ENST00000590334 ADSSL1Q8N142 457 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 TMEM174Q8WUU8 243 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 LINC01599Q8WXQ3 324 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 CPB2Q96IY4 423 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 TSPYL2Q9H2G4 693 aaPredicted RBP13.22□□□□□ -0.29
APOC1-206ENST00000590334 KCTD10Q9H3F6 313 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 PCDH10Q9P2E7 1040 aa13.22□□□□□ -0.29
APOC1-206ENST00000590334 CGNQ9P2M7 1197 aaKnown RBP13.22□□□□□ -0.29
APOC1-206ENST00000590334 PIN4Q9Y237 131 aaKnown RBP13.22□□□□□ -0.29
APOC1-206ENST00000590334 FNDC1Q4ZHG4 1894 aaPredicted RBP13.22□□□□□ -0.29
APOC1-206ENST00000590334 GBF1Q92538 1859 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 PPP1R3GB7ZBB8 358 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 RBAK-RBAKDNI3L0D1 243 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 ENPP3O14638 875 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 HNRNPDLO14979 420 aaKnown RBP13.21□□□□□ -0.29
APOC1-206ENST00000590334 ACTN1P12814 892 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 ZSCAN20P17040 1043 aaPredicted RBP13.21□□□□□ -0.29
APOC1-206ENST00000590334 MAGEA10P43363 369 aaPredicted RBP13.21□□□□□ -0.29
APOC1-206ENST00000590334 LIG4P49917 911 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 NLRP12P59046 1061 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 FAM189BP81408 668 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 MCL1Q07820 350 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 TMEM240Q5SV17 173 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 PSRC1Q6PGN9 363 aaPredicted RBP13.21□□□□□ -0.29
APOC1-206ENST00000590334 MPZL3Q6UWV2 235 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 MLKLQ8NB16 471 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 BICD1Q96G01 975 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 ADAM2Q99965 735 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 GDF15Q99988 308 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 GBP3Q9H0R5 595 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 IKZF4Q9H2S9 585 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 C1orf112Q9NSG2 853 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 USP20Q9Y2K6 914 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 TRIP11Q15643 1979 aa13.21□□□□□ -0.29
APOC1-206ENST00000590334 TDRD15B5MCY1 1934 aaKnown RBP13.21□□□□□ -0.3
APOC1-206ENST00000590334 A0A0B4J269 797 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 A0A0U1RQF3 1178 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.2□□□□□ -0.3
APOC1-206ENST00000590334 C9IYK1 514 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 ANKRD63C9JTQ0 380 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 H0YGN5 161 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 PDXKO00764 312 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 ZNF623O75123 536 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 FGBP02675 491 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 ACRP10323 421 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 MCF2P10911 925 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 SKIP12755 728 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
APOC1-206ENST00000590334 GARTP22102 1010 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 ADSSP30520 456 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 STIM1Q13586 685 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 NFIL3Q16649 462 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 DCAF4L1Q3SXM0 396 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 ZCWPW2Q504Y3 356 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 CT47A1Q5JQC4 288 aaPredicted RBP13.2□□□□□ -0.3
APOC1-206ENST00000590334 EEF1DP3Q658K8 133 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 SLFN12LQ6IEE8 588 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 CENPPQ6IPU0 288 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 FOXR2Q6PJQ5 311 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 SASS6Q6UVJ0 657 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 ZNF365Q70YC5 407 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 SLC24A5Q71RS6 500 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 APBB1IPQ7Z5R6 666 aaPredicted RBP13.2□□□□□ -0.3
APOC1-206ENST00000590334 NELFCDQ8IXH7 590 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 C12orf56Q8IXR9 622 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 SYCP3Q8IZU3 236 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 CRIPAKQ8N1N5 446 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 GOLGA5Q8TBA6 731 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 HERVK_113Q902F9 699 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 DHTKD1Q96HY7 919 aaPredicted RBP13.2□□□□□ -0.3
APOC1-206ENST00000590334 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.2□□□□□ -0.39e-7■□□□□ 9.7
APOC1-206ENST00000590334 ADPGKQ9BRR6 497 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 HAPLN2Q9GZV7 340 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 TYW1Q9NV66 732 aaKnown RBP13.2□□□□□ -0.3
APOC1-206ENST00000590334 MAPK8IP1Q9UQF2 711 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 TRAF3IP3Q9Y228 551 aa13.2□□□□□ -0.3
APOC1-206ENST00000590334 COL4A6Q14031 1691 aa13.19□□□□□ -0.3
APOC1-206ENST00000590334 TISP43B9A030 160 aa13.19□□□□□ -0.3
APOC1-206ENST00000590334 CLDN3O15551 220 aa13.19□□□□□ -0.3
APOC1-206ENST00000590334 FAM189A1O60320 539 aa13.19□□□□□ -0.3
APOC1-206ENST00000590334 BMP8BP34820 402 aa13.19□□□□□ -0.3
APOC1-206ENST00000590334 RAB27AP51159 221 aa13.19□□□□□ -0.3
APOC1-206ENST00000590334 NOLC1Q14978 699 aaKnown RBP eCLIP13.19□□□□□ -0.3
APOC1-206ENST00000590334 DPCR1Q3MIW9 517 aa13.19□□□□□ -0.3
APOC1-206ENST00000590334 ZSCAN23Q3MJ62 389 aa13.19□□□□□ -0.3
APOC1-206ENST00000590334 RASIP1Q5U651 963 aa13.19□□□□□ -0.3
APOC1-206ENST00000590334 TWF2Q6IBS0 349 aaKnown RBP13.19□□□□□ -0.3
APOC1-206ENST00000590334 MRPL10Q7Z7H8 261 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms