RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 ZDHHC9Q9Y397 364 aa20.12■□□□□ 0.81
DDX39A-212ENST00000590260 PCDHB12Q9Y5F1 795 aa20.12■□□□□ 0.81
DDX39A-212ENST00000590260 MYO7AQ13402 2215 aa20.11■□□□□ 0.81
DDX39A-212ENST00000590260 FSCN2O14926 492 aa20.11■□□□□ 0.81
DDX39A-212ENST00000590260 F13A1P00488 732 aa20.11■□□□□ 0.81
DDX39A-212ENST00000590260 LTBRP36941 435 aa20.11■□□□□ 0.81
DDX39A-212ENST00000590260 KCNQ1P51787 676 aa20.11■□□□□ 0.81
DDX39A-212ENST00000590260 PLCB3Q01970 1234 aa20.11■□□□□ 0.81
DDX39A-212ENST00000590260 ATXN2LQ8WWM7 1075 aaKnown RBP20.11■□□□□ 0.81
DDX39A-212ENST00000590260 RAD54LQ92698 747 aa20.11■□□□□ 0.81
DDX39A-212ENST00000590260 CDK5RAP3Q96JB5 506 aa20.11■□□□□ 0.81
DDX39A-212ENST00000590260 IFT74Q96LB3 600 aa20.11■□□□□ 0.81
DDX39A-212ENST00000590260 ZFP42Q96MM3 310 aa20.11■□□□□ 0.81
DDX39A-212ENST00000590260 ZNF558Q96NG5 402 aa20.11■□□□□ 0.81
DDX39A-212ENST00000590260 ASB2Q96Q27 587 aa20.11■□□□□ 0.81
DDX39A-212ENST00000590260 NTPCRQ9BSD7 190 aaKnown RBP20.11■□□□□ 0.81
DDX39A-212ENST00000590260 VN1R3Q9BXE9 311 aa20.11■□□□□ 0.81
DDX39A-212ENST00000590260 COL25A1Q9BXS0 654 aaPredicted RBP20.11■□□□□ 0.81
DDX39A-212ENST00000590260 MRPL9Q9BYD2 267 aaKnown RBP20.11■□□□□ 0.81
DDX39A-212ENST00000590260 AAASQ9NRG9 546 aa20.11■□□□□ 0.81
DDX39A-212ENST00000590260 MYH11P35749 1972 aa20.1■□□□□ 0.81
DDX39A-212ENST00000590260 ARL5CA6NH57 179 aa20.1■□□□□ 0.81
DDX39A-212ENST00000590260 GALTP07902 379 aa20.1■□□□□ 0.81
DDX39A-212ENST00000590260 ITGA4P13612 1032 aa20.1■□□□□ 0.81
DDX39A-212ENST00000590260 LIG1P18858 919 aa20.1■□□□□ 0.81
DDX39A-212ENST00000590260 AKAP5P24588 427 aa20.1■□□□□ 0.81
DDX39A-212ENST00000590260 MLH1P40692 756 aa20.1■□□□□ 0.81
DDX39A-212ENST00000590260 SLC11A1P49279 550 aa20.1■□□□□ 0.81
DDX39A-212ENST00000590260 PRPF4BQ13523 1007 aaKnown RBP20.1■□□□□ 0.81
DDX39A-212ENST00000590260 MAPK6Q16659 721 aa20.1■□□□□ 0.81
DDX39A-212ENST00000590260 THNSL1Q8IYQ7 743 aa20.1■□□□□ 0.81
DDX39A-212ENST00000590260 CNNM3Q8NE01 707 aa20.1■□□□□ 0.81
DDX39A-212ENST00000590260 MRPS27Q92552 414 aaKnown RBP20.1■□□□□ 0.81
DDX39A-212ENST00000590260 HLA-CQ95604 372 aa20.1■□□□□ 0.81
DDX39A-212ENST00000590260 CALML4Q96GE6 196 aa20.1■□□□□ 0.81
DDX39A-212ENST00000590260 GAD1Q99259 594 aa20.1■□□□□ 0.81
DDX39A-212ENST00000590260 REEP2Q9BRK0 252 aa20.1■□□□□ 0.81
DDX39A-212ENST00000590260 APOL6Q9BWW8 343 aa20.1■□□□□ 0.81
DDX39A-212ENST00000590260 UBE2ZQ9H832 354 aaPredicted RBP20.1■□□□□ 0.81
DDX39A-212ENST00000590260 PHLPP2Q6ZVD8 1323 aa20.09■□□□□ 0.81
DDX39A-212ENST00000590260 ABLIM1O14639 778 aa20.09■□□□□ 0.81
DDX39A-212ENST00000590260 LINC01565O15544 149 aa20.09■□□□□ 0.81
DDX39A-212ENST00000590260 ZC3H11AO75152 810 aaKnown RBP eCLIP20.09■□□□□ 0.81
DDX39A-212ENST00000590260 POMCP01189 267 aa20.09■□□□□ 0.81
DDX39A-212ENST00000590260 UBE3AQ05086 875 aa20.09■□□□□ 0.81
DDX39A-212ENST00000590260 DHX8Q14562 1220 aaKnown RBP20.09■□□□□ 0.81
DDX39A-212ENST00000590260 CTC1Q2NKJ3 1217 aa20.09■□□□□ 0.81
DDX39A-212ENST00000590260 FOXD4L6Q3SYB3 417 aaPredicted RBP20.09■□□□□ 0.81
DDX39A-212ENST00000590260 FOXD4L3Q6VB84 417 aaPredicted RBP20.09■□□□□ 0.81
DDX39A-212ENST00000590260 GPBP1Q86WP2 473 aa20.09■□□□□ 0.81
DDX39A-212ENST00000590260 TMEM161BQ8NDZ6 487 aa20.09■□□□□ 0.81
DDX39A-212ENST00000590260 CHAMP1Q96JM3 812 aa20.09■□□□□ 0.81
DDX39A-212ENST00000590260 DRC1Q96MC2 740 aa20.09■□□□□ 0.81
DDX39A-212ENST00000590260 FIZ1Q96SL8 496 aa20.09■□□□□ 0.81
DDX39A-212ENST00000590260 TIPINQ9BVW5 301 aa20.09■□□□□ 0.81
DDX39A-212ENST00000590260 TMEM134Q9H6X4 195 aa20.09■□□□□ 0.81
DDX39A-212ENST00000590260 PTPRHQ9HD43 1115 aa20.09■□□□□ 0.81
DDX39A-212ENST00000590260 SPG21Q9NZD8 308 aa20.09■□□□□ 0.81
DDX39A-212ENST00000590260 COG5Q9UP83 839 aa20.09■□□□□ 0.81
DDX39A-212ENST00000590260 TDRD15B5MCY1 1934 aaKnown RBP20.09■□□□□ 0.81
DDX39A-212ENST00000590260 CCDC169A6NNP5 214 aa20.08■□□□□ 0.81
DDX39A-212ENST00000590260 SLC16A4O15374 487 aa20.08■□□□□ 0.81
DDX39A-212ENST00000590260 HSP90AA1P07900 732 aaKnown RBP20.08■□□□□ 0.81
DDX39A-212ENST00000590260 BMP1P13497 986 aa20.08■□□□□ 0.81
DDX39A-212ENST00000590260 PLS3P13797 630 aa20.08■□□□□ 0.81
DDX39A-212ENST00000590260 SCNN1GP51170 649 aa20.08■□□□□ 0.81
DDX39A-212ENST00000590260 EFNA5P52803 228 aa20.08■□□□□ 0.81
DDX39A-212ENST00000590260 MRPS5P82675 430 aaKnown RBP20.08■□□□□ 0.81
DDX39A-212ENST00000590260 DLX2Q07687 328 aaPredicted RBP20.08■□□□□ 0.81
DDX39A-212ENST00000590260 DSC1Q08554 894 aa20.08■□□□□ 0.81
DDX39A-212ENST00000590260 NCBP1Q09161 790 aaKnown RBP20.08■□□□□ 0.81
DDX39A-212ENST00000590260 GIT2Q14161 759 aa20.08■□□□□ 0.81
DDX39A-212ENST00000590260 CSPP1Q1MSJ5 1256 aa20.08■□□□□ 0.81
DDX39A-212ENST00000590260 SPIRE2Q8WWL2 714 aa20.08■□□□□ 0.81
DDX39A-212ENST00000590260 RSPH1Q8WYR4 309 aa20.08■□□□□ 0.81
DDX39A-212ENST00000590260 LARP4BQ92615 738 aaKnown RBP20.08■□□□□ 0.81
DDX39A-212ENST00000590260 GBP3Q9H0R5 595 aa20.08■□□□□ 0.81
DDX39A-212ENST00000590260 KMT5AQ9NQR1 393 aa20.08■□□□□ 0.81
DDX39A-212ENST00000590260 TLR9Q9NR96 1032 aa20.08■□□□□ 0.81
DDX39A-212ENST00000590260 KCND2Q9NZV8 630 aa20.08■□□□□ 0.81
DDX39A-212ENST00000590260 KLK14Q9P0G3 267 aa20.08■□□□□ 0.81
DDX39A-212ENST00000590260 LZTS1Q9Y250 596 aa20.08■□□□□ 0.81
DDX39A-212ENST00000590260 F8W810 466 aa20.07■□□□□ 0.8
DDX39A-212ENST00000590260 K7ERI5 159 aa20.07■□□□□ 0.8
DDX39A-212ENST00000590260 N4BP3O15049 544 aa20.07■□□□□ 0.8
DDX39A-212ENST00000590260 DDIT3P35638 169 aa20.07■□□□□ 0.8
DDX39A-212ENST00000590260 ZNF131P52739 623 aa20.07■□□□□ 0.8
DDX39A-212ENST00000590260 NCKAP1LP55160 1127 aa20.07■□□□□ 0.8
DDX39A-212ENST00000590260 RBM10P98175 930 aaKnown RBP20.07■□□□□ 0.8
DDX39A-212ENST00000590260 DMP1Q13316 513 aaPredicted RBP20.07■□□□□ 0.8
DDX39A-212ENST00000590260 TJAP1Q5JTD0 557 aa20.07■□□□□ 0.8
DDX39A-212ENST00000590260 COLGALT2Q8IYK4 626 aa20.07■□□□□ 0.8
DDX39A-212ENST00000590260 KRI1Q8N9T8 703 aaKnown RBP20.07■□□□□ 0.8
DDX39A-212ENST00000590260 PABPC5Q96DU9 382 aaKnown RBP20.07■□□□□ 0.8
DDX39A-212ENST00000590260 ACO2Q99798 780 aaKnown RBP20.07■□□□□ 0.8
DDX39A-212ENST00000590260 TARS2Q9BW92 718 aaKnown RBP20.07■□□□□ 0.8
DDX39A-212ENST00000590260 C17orf75Q9HAS0 396 aa20.07■□□□□ 0.8
DDX39A-212ENST00000590260 MARCH5Q9NX47 278 aa20.07■□□□□ 0.8
DDX39A-212ENST00000590260 SNTG2Q9NY99 539 aa20.07■□□□□ 0.8
DDX39A-212ENST00000590260 TNFSF13BQ9Y275 285 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms