RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 SH2B1Q9NRF2 756 aaPredicted RBP13.57□□□□□ -0.24
VAT1-206ENST00000589709 GIT1Q9Y2X7 761 aa13.57□□□□□ -0.24
VAT1-206ENST00000589709 A0A1B0GUA9 196 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 ARL5CA6NH57 179 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 NRP1O14786 923 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 POMCP01189 267 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 ARF4P18085 180 aaPredicted RBP13.56□□□□□ -0.24
VAT1-206ENST00000589709 ATP2B1P20020 1258 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 RPA1P27694 616 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 CA8P35219 290 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 TRAPPC10P48553 1259 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 RBM25P49756 843 aaKnown RBP13.56□□□□□ -0.24
VAT1-206ENST00000589709 GUCY1B3Q02153 619 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 DSC1Q08554 894 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 CCDC83Q8IWF9 413 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 COLGALT2Q8IYK4 626 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 HACE1Q8IYU2 909 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 ERMNQ8TAM6 284 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 AUTS2Q8WXX7 1259 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 RIPOR3Q96MK2 946 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 APOL5Q9BWW9 433 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 POLR3FQ9H1D9 316 aaPredicted RBP13.56□□□□□ -0.24
VAT1-206ENST00000589709 RNF39Q9H2S5 420 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 DAXXQ9UER7 740 aaPredicted RBP13.56□□□□□ -0.24
VAT1-206ENST00000589709 NR2E1Q9Y466 385 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 ZMYM2Q9UBW7 1377 aa13.56□□□□□ -0.24
VAT1-206ENST00000589709 ARID2Q68CP9 1835 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 PIEZO1Q92508 2521 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 A0A087WWV3 80 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 TMEM221A6NGB7 291 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 M0R296 226 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 MED24O75448 989 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 EFEMP2O95967 443 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 OR52Z1P0C646 297 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 EPCAMP16422 314 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 MUTP22033 750 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 SIGLEC14Q08ET2 396 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 PTPN21Q16825 1174 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 ATAT1Q5SQI0 421 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 SLC27A1Q6PCB7 646 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 PPP4R3CPQ6ZMV5 832 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 CPB2Q96IY4 423 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 PRIMPOLQ96LW4 560 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 KLHL5Q96PQ7 755 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 GAD1Q99259 594 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 KIF2CQ99661 725 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 EMILIN2Q9BXX0 1053 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 MRPL17Q9NRX2 175 aaKnown RBP13.55□□□□□ -0.24
VAT1-206ENST00000589709 SSX2IPQ9Y2D8 614 aa13.55□□□□□ -0.24
VAT1-206ENST00000589709 ZNF318Q5VUA4 2279 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 USO1O60763 962 aaKnown RBP13.54□□□□□ -0.24
VAT1-206ENST00000589709 NR1I2O75469 434 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 SOD2P04179 222 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 CNPP09543 421 aaKnown RBP13.54□□□□□ -0.24
VAT1-206ENST00000589709 CYP11B2P19099 503 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 ZNF174Q15697 407 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 FAM187BQ17R55 369 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 TTC38Q5R3I4 469 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 RARS2Q5T160 578 aaKnown RBP13.54□□□□□ -0.24
VAT1-206ENST00000589709 CDCA2Q69YH5 1023 aaPredicted RBP13.54□□□□□ -0.24
VAT1-206ENST00000589709 KIAA1841Q6NSI8 718 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 NOSTRINQ8IVI9 506 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 GPR65Q8IYL9 337 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 RNF168Q8IYW5 571 aaPredicted RBP13.54□□□□□ -0.24
VAT1-206ENST00000589709 C12orf76Q8N812 135 aaPredicted RBP13.54□□□□□ -0.24
VAT1-206ENST00000589709 GSTCDQ8NEC7 633 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 PBXIP1Q96AQ6 731 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 ZFP42Q96MM3 310 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 TRIM6Q9C030 488 aaPredicted RBP13.54□□□□□ -0.24
VAT1-206ENST00000589709 FZD8Q9H461 694 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 POMKQ9H5K3 350 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 GPRC5CQ9NQ84 441 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 PRMT7Q9NVM4 692 aaPredicted RBP13.54□□□□□ -0.24
VAT1-206ENST00000589709 MARCH5Q9NX47 278 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 MIOSQ9NXC5 875 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 USTQ9Y2C2 406 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 HES2Q9Y543 173 aa13.54□□□□□ -0.24
VAT1-206ENST00000589709 LRRIQ4A6NIV6 560 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 B4GALT5O43286 388 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 C1RP00736 705 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 U2AF2P26368 475 aaKnown RBP eCLIP13.53□□□□□ -0.24
VAT1-206ENST00000589709 KLRC2P26717 231 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 MLH1P40692 756 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 FXR2P51116 673 aaKnown RBP eCLIP13.53□□□□□ -0.242e-10■■■■□ 21.5
VAT1-206ENST00000589709 SCNN1GP51170 649 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 CLCN4P51793 760 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 PDIA5Q14554 519 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 KIAA0319Q5VV43 1072 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 PADI6Q6TGC4 694 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 CABP7Q86V35 215 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 ZBTB8OSQ8IWT0 167 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 ZDHHC14Q8IZN3 488 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 C4orf32Q8N8J7 132 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 FAM184AQ8NB25 1140 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 FBXL18Q96ME1 805 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 RPS6KC1Q96S38 1066 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 HERC2P3Q9BVR0 1158 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 COLEC11Q9BWP8 271 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 C2orf40Q9H1Z8 148 aa13.53□□□□□ -0.24
VAT1-206ENST00000589709 NXF3Q9H4D5 531 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms