RNA–Protein interactions for RNA: ENST00000589686.5

CIRBP-224, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-224ENST00000589686 CDR2LQ86X02 465 aaPredicted RBP23.2■■□□□ 1.3
CIRBP-224ENST00000589686 TMEM169Q96HH4 297 aa23.2■■□□□ 1.3
CIRBP-224ENST00000589686 FAM193BQ96PV7 902 aaPredicted RBP23.2■■□□□ 1.3
CIRBP-224ENST00000589686 UHRF1Q96T88 793 aaPredicted RBP23.2■■□□□ 1.3
CIRBP-224ENST00000589686 GBP3Q9H0R5 595 aa23.2■■□□□ 1.3
CIRBP-224ENST00000589686 RNF39Q9H2S5 420 aa23.2■■□□□ 1.3
CIRBP-224ENST00000589686 TLE6Q9H808 572 aa23.2■■□□□ 1.3
CIRBP-224ENST00000589686 C17orf75Q9HAS0 396 aa23.2■■□□□ 1.3
CIRBP-224ENST00000589686 NGRNQ9NPE2 291 aaKnown RBP23.2■■□□□ 1.3
CIRBP-224ENST00000589686 KCND2Q9NZV8 630 aa23.2■■□□□ 1.3
CIRBP-224ENST00000589686 DAXXQ9UER7 740 aaPredicted RBP23.2■■□□□ 1.3
CIRBP-224ENST00000589686 GIT1Q9Y2X7 761 aa23.2■■□□□ 1.3
CIRBP-224ENST00000589686 PCDHGC5Q9Y5F6 944 aa23.2■■□□□ 1.3
CIRBP-224ENST00000589686 ARL5CA6NH57 179 aa23.19■■□□□ 1.3
CIRBP-224ENST00000589686 NT5C1B-RDH14C9J2C7 533 aa23.19■■□□□ 1.3
CIRBP-224ENST00000589686 INPPL1O15357 1258 aa23.19■■□□□ 1.3
CIRBP-224ENST00000589686 POMCP01189 267 aa23.19■■□□□ 1.3
CIRBP-224ENST00000589686 GALTP07902 379 aa23.19■■□□□ 1.3
CIRBP-224ENST00000589686 LIG1P18858 919 aa23.19■■□□□ 1.3
CIRBP-224ENST00000589686 GTF2F1P35269 517 aaKnown RBP eCLIP23.19■■□□□ 1.33e-6■■□□□ 12.9
CIRBP-224ENST00000589686 NRIP1P48552 1158 aa23.19■■□□□ 1.3
CIRBP-224ENST00000589686 AFF1P51825 1210 aaKnown RBP23.19■■□□□ 1.3
CIRBP-224ENST00000589686 PEX3P56589 373 aa23.19■■□□□ 1.3
CIRBP-224ENST00000589686 DMP1Q13316 513 aaPredicted RBP23.19■■□□□ 1.3
CIRBP-224ENST00000589686 ADAM15Q13444 863 aa23.19■■□□□ 1.3
CIRBP-224ENST00000589686 ZNF280BQ86YH2 543 aa23.19■■□□□ 1.3
CIRBP-224ENST00000589686 DAW1Q8N136 415 aa23.19■■□□□ 1.3
CIRBP-224ENST00000589686 EFHBQ8N7U6 833 aa23.19■■□□□ 1.3
CIRBP-224ENST00000589686 TCF25Q9BQ70 676 aa23.19■■□□□ 1.3
CIRBP-224ENST00000589686 KIFC3Q9BVG8 833 aa23.19■■□□□ 1.3
CIRBP-224ENST00000589686 APOL6Q9BWW8 343 aa23.19■■□□□ 1.3
CIRBP-224ENST00000589686 NXF3Q9H4D5 531 aaKnown RBP23.19■■□□□ 1.3
CIRBP-224ENST00000589686 ENTPD7Q9NQZ7 604 aa23.19■■□□□ 1.3
CIRBP-224ENST00000589686 FSD2A1L4K1 749 aa23.18■■□□□ 1.3
CIRBP-224ENST00000589686 CCDC169A6NNP5 214 aa23.18■■□□□ 1.3
CIRBP-224ENST00000589686 H3BQ06 376 aaPredicted RBP23.18■■□□□ 1.3
CIRBP-224ENST00000589686 K7ERI5 159 aa23.18■■□□□ 1.3
CIRBP-224ENST00000589686 HSP90AA1P07900 732 aaKnown RBP23.18■■□□□ 1.3
CIRBP-224ENST00000589686 PLA2G4BP0C869 781 aa23.18■■□□□ 1.3
CIRBP-224ENST00000589686 LTBRP36941 435 aa23.18■■□□□ 1.3
CIRBP-224ENST00000589686 NPTX2P47972 431 aa23.18■■□□□ 1.3
CIRBP-224ENST00000589686 SLC12A3P55017 1021 aa23.18■■□□□ 1.3
CIRBP-224ENST00000589686 MAPK7Q13164 816 aa23.18■■□□□ 1.3
CIRBP-224ENST00000589686 PTPAQ15257 358 aa23.18■■□□□ 1.3
CIRBP-224ENST00000589686 TMC7Q7Z402 723 aa23.18■■□□□ 1.3
CIRBP-224ENST00000589686 RBM23Q86U06 439 aaKnown RBP23.18■■□□□ 1.3
CIRBP-224ENST00000589686 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.18■■□□□ 1.3
CIRBP-224ENST00000589686 GAD1Q99259 594 aa23.18■■□□□ 1.3
CIRBP-224ENST00000589686 CDCA3Q99618 268 aaPredicted RBP23.18■■□□□ 1.3
CIRBP-224ENST00000589686 ADPGKQ9BRR6 497 aa23.18■■□□□ 1.3
CIRBP-224ENST00000589686 TMEM175Q9BSA9 504 aa23.18■■□□□ 1.3
CIRBP-224ENST00000589686 PDZD7Q9H5P4 517 aa23.18■■□□□ 1.3
CIRBP-224ENST00000589686 DNAJB4Q9UDY4 337 aa23.18■■□□□ 1.3
CIRBP-224ENST00000589686 KCNG1Q9UIX4 513 aa23.18■■□□□ 1.3
CIRBP-224ENST00000589686 PHLPP2Q6ZVD8 1323 aa23.17■■□□□ 1.3
CIRBP-224ENST00000589686 TTLL13PA6NNM8 815 aa23.17■■□□□ 1.3
CIRBP-224ENST00000589686 DDHD2O94830 711 aa23.17■■□□□ 1.3
CIRBP-224ENST00000589686 ALDH2P05091 517 aa23.17■■□□□ 1.3
CIRBP-224ENST00000589686 MLH1P40692 756 aa23.17■■□□□ 1.3
CIRBP-224ENST00000589686 SLC11A1P49279 550 aa23.17■■□□□ 1.3
CIRBP-224ENST00000589686 GRIN1Q05586 938 aa23.17■■□□□ 1.3
CIRBP-224ENST00000589686 BMS1Q14692 1282 aaKnown RBP23.17■■□□□ 1.3
CIRBP-224ENST00000589686 PLPP4Q5VZY2 271 aa23.17■■□□□ 1.3
CIRBP-224ENST00000589686 PTCRAQ6ISU1 281 aaPredicted RBP23.17■■□□□ 1.3
CIRBP-224ENST00000589686 FAM173BQ6P4H8 233 aa23.17■■□□□ 1.3
CIRBP-224ENST00000589686 IGSF21Q96ID5 467 aa23.17■■□□□ 1.3
CIRBP-224ENST00000589686 KMT5AQ9NQR1 393 aa23.17■■□□□ 1.3
CIRBP-224ENST00000589686 RBM19Q9Y4C8 960 aaKnown RBP23.17■■□□□ 1.3
CIRBP-224ENST00000589686 ZMYM2Q9UBW7 1377 aa23.16■■□□□ 1.3
CIRBP-224ENST00000589686 TCF20Q9UGU0 1960 aaKnown RBP23.16■■□□□ 1.3
CIRBP-224ENST00000589686 SPTBN5Q9NRC6 3674 aaKnown RBP23.16■■□□□ 1.3
CIRBP-224ENST00000589686 LINC01565O15544 149 aa23.16■■□□□ 1.3
CIRBP-224ENST00000589686 PDIA4P13667 645 aaKnown RBP23.16■■□□□ 1.3
CIRBP-224ENST00000589686 AKAP5P24588 427 aa23.16■■□□□ 1.3
CIRBP-224ENST00000589686 DDX53Q86TM3 631 aaKnown RBP23.16■■□□□ 1.3
CIRBP-224ENST00000589686 TMEM173Q86WV6 379 aaPredicted RBP23.16■■□□□ 1.3
CIRBP-224ENST00000589686 RASSF8Q8NHQ8 419 aa23.16■■□□□ 1.3
CIRBP-224ENST00000589686 ZFP42Q96MM3 310 aa23.16■■□□□ 1.3
CIRBP-224ENST00000589686 TMEM134Q9H6X4 195 aa23.16■■□□□ 1.3
CIRBP-224ENST00000589686 ARHGAP28Q9P2N2 729 aa23.16■■□□□ 1.3
CIRBP-224ENST00000589686 STK39Q9UEW8 545 aa23.16■■□□□ 1.3
CIRBP-224ENST00000589686 PARP2Q9UGN5 583 aa23.16■■□□□ 1.3
CIRBP-224ENST00000589686 FAM50BQ9Y247 325 aa23.16■■□□□ 1.3
CIRBP-224ENST00000589686 FAN1Q9Y2M0 1017 aa23.16■■□□□ 1.3
CIRBP-224ENST00000589686 SRPRBQ9Y5M8 271 aaKnown RBP23.16■■□□□ 1.3
CIRBP-224ENST00000589686 GRXCR2A6NFK2 248 aa23.15■■□□□ 1.3
CIRBP-224ENST00000589686 TNFRSF10AO00220 468 aa23.15■■□□□ 1.3
CIRBP-224ENST00000589686 PER2O15055 1255 aa23.15■■□□□ 1.3
CIRBP-224ENST00000589686 B4GALT3O60512 393 aa23.15■■□□□ 1.3
CIRBP-224ENST00000589686 MARCKSP29966 332 aaPredicted RBP23.15■■□□□ 1.3
CIRBP-224ENST00000589686 NDUFV1P49821 464 aa23.15■■□□□ 1.3
CIRBP-224ENST00000589686 CEBPZQ03701 1054 aaKnown RBP23.15■■□□□ 1.3
CIRBP-224ENST00000589686 DLX2Q07687 328 aaPredicted RBP23.15■■□□□ 1.3
CIRBP-224ENST00000589686 RAD51AP2Q09MP3 1159 aa23.15■■□□□ 1.3
CIRBP-224ENST00000589686 SMC1AQ14683 1233 aaKnown RBP23.15■■□□□ 1.3
CIRBP-224ENST00000589686 DUSP6Q16828 381 aa23.15■■□□□ 1.3
CIRBP-224ENST00000589686 VPS52Q8N1B4 723 aa23.15■■□□□ 1.3
CIRBP-224ENST00000589686 NTPCRQ9BSD7 190 aaKnown RBP23.15■■□□□ 1.3
CIRBP-224ENST00000589686 CCSER1Q9C0I3 900 aa23.15■■□□□ 1.3
CIRBP-224ENST00000589686 FBXO2Q9UK22 296 aaPredicted RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms