RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 PREPLQ4J6C6 727 aaPredicted RBP15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 BARGINQ6ZT62 677 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 GLG1Q92896 1179 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 RNF25Q96BH1 459 aaPredicted RBP15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 MIEF2Q96C03 454 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 DNAJC7Q99615 494 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 ADPGKQ9BRR6 497 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 PALLDQ8WX93 1383 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 MAP2K7O14733 419 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 RTN2O75298 545 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 FCER1AP12319 257 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 MCAMP43121 646 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 C16orf89Q6UX73 402 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 DDHD1Q8NEL9 900 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 AGPAT1Q99943 283 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 MROH7-TTC4A0A0A0MT08 1334 aa15.5■□□□□ 0.07
SMARCA4-214ENST00000589677 YTHDF3Q7Z739 585 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 TMEM35BQ8NCS4 154 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 SLC35G2Q8TBE7 412 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 RBM15Q96T37 977 aaKnown RBP eCLIP15.49■□□□□ 0.072e-6■■■■□ 21.5
SMARCA4-214ENST00000589677 TRIM9Q9C026 710 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 AP3B2Q13367 1082 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 SLC29A2Q14542 456 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 USP17L2Q6R6M4 530 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 XXYLT1Q8NBI6 393 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 C7orf25Q9BPX7 421 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 SLC13A1Q9BZW2 595 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 DDX20Q9UHI6 824 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 POTEMA6NI47 508 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 ZNF233A6NK53 670 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 SYF2O95926 243 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 SMARCA1P28370 1054 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 ERVK-24P63145 666 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 OR6B2Q6IFH4 312 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 MSL3Q8N5Y2 521 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 EME1Q96AY2 570 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 ERGIC2Q96RQ1 377 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 CCNL1Q9UK58 526 aaPredicted RBP15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 CHMP2BQ9UQN3 213 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 ATP2B4P23634 1241 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 DDX42Q86XP3 938 aaKnown RBP eCLIP15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 RMDN2Q96LZ7 410 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 FAM210AQ96ND0 272 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 TSPOAP1O95153 1857 aa15.49■□□□□ 0.07
SMARCA4-214ENST00000589677 ARSEP51690 589 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 SKOR1P84550 965 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 INPP5AQ14642 412 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 ZKSCAN4Q969J2 545 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 MAGEB18Q96M61 343 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 ZBTB18Q99592 522 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 ANO3Q9BYT9 981 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 TMEM94Q12767 1356 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 KRT7P08729 469 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 GALCP54803 685 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 UBE2SQ16763 222 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 TRIM65Q6PJ69 517 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 BTNL9Q6UXG8 535 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 SUPT20HQ8NEM7 779 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 B4GALNT2Q8NHY0 566 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 HSPH1Q92598 858 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 ATP11BQ9Y2G3 1177 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 MAP3K4Q9Y6R4 1608 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 H3BRJ5 948 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 SLC16A3O15427 465 aaKnown RBP15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 FLOT2Q14254 428 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 TRIM72Q6ZMU5 477 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 ARHGAP27Q6ZUM4 889 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 OLFML3Q9NRN5 406 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 ZNF446Q9NWS9 450 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 UVRAGQ9P2Y5 699 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 SEL1LQ9UBV2 794 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 TARSP26639 723 aaKnown RBP15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 GTSE1Q9NYZ3 720 aa15.48■□□□□ 0.07
SMARCA4-214ENST00000589677 E9PMD0 336 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 ALAS1P13196 640 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 CDK17Q00537 523 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 STX3Q13277 289 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 PPP1R18Q6NYC8 613 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 ENOSF1Q7L5Y1 443 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 KIRREL3Q8IZU9 778 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 SCG3Q8WXD2 468 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.47■□□□□ 0.073e-6■■■■■ 29.3
SMARCA4-214ENST00000589677 ALG13Q9NP73 1137 aaKnown RBP15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 PPP1R3GB7ZBB8 358 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 WASHC2DQ5SRD0 308 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 LRRC8BQ6P9F7 803 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 GIMAP8Q8ND71 665 aaPredicted RBP15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 OPTNQ96CV9 577 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 SNX25Q9H3E2 840 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 MRGBPQ9NV56 204 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 ASNSD1Q9NWL6 643 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 SLC12A1Q13621 1099 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 TFDP1Q14186 410 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 LRRC8EQ6NSJ5 796 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 ACAP3Q96P50 834 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 GINS2Q9Y248 185 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 ZNF804BA4D1E1 1349 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 PIK3R2O00459 728 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 PDXKO00764 312 aa15.47■□□□□ 0.07
SMARCA4-214ENST00000589677 GTF2IP78347 998 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms