RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 DNAJB1P25685 340 aa18.63■□□□□ 0.57
H3F3B-208ENST00000589599 NASPP49321 788 aaPredicted RBP18.63■□□□□ 0.57
H3F3B-208ENST00000589599 BCAR1P56945 870 aa18.63■□□□□ 0.57
H3F3B-208ENST00000589599 RAD51AP2Q09MP3 1159 aa18.63■□□□□ 0.57
H3F3B-208ENST00000589599 DHX8Q14562 1220 aaKnown RBP18.63■□□□□ 0.57
H3F3B-208ENST00000589599 PDE12Q6L8Q7 609 aaKnown RBP18.63■□□□□ 0.57
H3F3B-208ENST00000589599 GPBP1Q86WP2 473 aa18.63■□□□□ 0.57
H3F3B-208ENST00000589599 CDR2LQ86X02 465 aaPredicted RBP18.63■□□□□ 0.57
H3F3B-208ENST00000589599 MRPS27Q92552 414 aaKnown RBP18.63■□□□□ 0.57
H3F3B-208ENST00000589599 RAD54LQ92698 747 aa18.63■□□□□ 0.57
H3F3B-208ENST00000589599 CLIC6Q96NY7 704 aa18.63■□□□□ 0.57
H3F3B-208ENST00000589599 ASB2Q96Q27 587 aa18.63■□□□□ 0.57
H3F3B-208ENST00000589599 APOL6Q9BWW8 343 aa18.63■□□□□ 0.57
H3F3B-208ENST00000589599 TMEM134Q9H6X4 195 aa18.63■□□□□ 0.57
H3F3B-208ENST00000589599 TFIP11Q9UBB9 837 aaKnown RBP18.63■□□□□ 0.57
H3F3B-208ENST00000589599 LZTS1Q9Y250 596 aa18.63■□□□□ 0.57
H3F3B-208ENST00000589599 GIT1Q9Y2X7 761 aa18.63■□□□□ 0.57
H3F3B-208ENST00000589599 ZC3H11AO75152 810 aaKnown RBP eCLIP18.62■□□□□ 0.57
H3F3B-208ENST00000589599 PLS3P13797 630 aa18.62■□□□□ 0.57
H3F3B-208ENST00000589599 DDIT3P35638 169 aa18.62■□□□□ 0.57
H3F3B-208ENST00000589599 MAPK7Q13164 816 aa18.62■□□□□ 0.57
H3F3B-208ENST00000589599 CAMK1Q14012 370 aa18.62■□□□□ 0.57
H3F3B-208ENST00000589599 TJAP1Q5JTD0 557 aa18.62■□□□□ 0.57
H3F3B-208ENST00000589599 SPECC1Q5M775 1068 aa18.62■□□□□ 0.57
H3F3B-208ENST00000589599 RRAGBQ5VZM2 374 aa18.62■□□□□ 0.57
H3F3B-208ENST00000589599 SPIRE2Q8WWL2 714 aa18.62■□□□□ 0.57
H3F3B-208ENST00000589599 SYMPKQ92797 1274 aaKnown RBP18.62■□□□□ 0.57
H3F3B-208ENST00000589599 NTPCRQ9BSD7 190 aaKnown RBP18.62■□□□□ 0.57
H3F3B-208ENST00000589599 GBP3Q9H0R5 595 aa18.62■□□□□ 0.57
H3F3B-208ENST00000589599 RNF39Q9H2S5 420 aa18.62■□□□□ 0.57
H3F3B-208ENST00000589599 PDZD7Q9H5P4 517 aa18.62■□□□□ 0.57
H3F3B-208ENST00000589599 TLR9Q9NR96 1032 aa18.62■□□□□ 0.57
H3F3B-208ENST00000589599 HES2Q9Y543 173 aa18.62■□□□□ 0.57
H3F3B-208ENST00000589599 ARL5CA6NH57 179 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 SPTLC2O15270 562 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 F13A1P00488 732 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 POMCP01189 267 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 ALDH2P05091 517 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 PBX3P40426 434 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 STRN3Q13033 797 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 BECN1Q14457 450 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 MCM6Q14566 821 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 BMS1Q14692 1282 aaKnown RBP18.61■□□□□ 0.57
H3F3B-208ENST00000589599 ARSHQ5FYA8 562 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 USP49Q70CQ1 688 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 SLC39A11Q8N1S5 342 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 LINC00301Q8NCQ3 95 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 TMEM169Q96HH4 297 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 GAD1Q99259 594 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 NXF3Q9H4D5 531 aaKnown RBP18.61■□□□□ 0.57
H3F3B-208ENST00000589599 NRDE2Q9H7Z3 1164 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 BLOC1S4Q9NUP1 217 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 LARSQ9P2J5 1176 aaKnown RBP18.61■□□□□ 0.57
H3F3B-208ENST00000589599 STK17AQ9UEE5 414 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 PARP2Q9UGN5 583 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 ODF2LQ9ULJ1 636 aa18.61■□□□□ 0.57
H3F3B-208ENST00000589599 FNDC1Q4ZHG4 1894 aaPredicted RBP18.6■□□□□ 0.57
H3F3B-208ENST00000589599 NLRC5Q86WI3 1866 aa18.6■□□□□ 0.57
H3F3B-208ENST00000589599 NPHP3-ACAD11A0A0J9YXS1 232 aa18.6■□□□□ 0.57
H3F3B-208ENST00000589599 TTLL13PA6NNM8 815 aa18.6■□□□□ 0.57
H3F3B-208ENST00000589599 H0YCG3 227 aa18.6■□□□□ 0.57
H3F3B-208ENST00000589599 SLC16A4O15374 487 aa18.6■□□□□ 0.57
H3F3B-208ENST00000589599 PPP6R2O75170 966 aa18.6■□□□□ 0.57
H3F3B-208ENST00000589599 YEATS4O95619 227 aa18.6■□□□□ 0.57
H3F3B-208ENST00000589599 AKAP5P24588 427 aa18.6■□□□□ 0.57
H3F3B-208ENST00000589599 DCAF4L1Q3SXM0 396 aa18.6■□□□□ 0.57
H3F3B-208ENST00000589599 NT5DC1Q5TFE4 455 aa18.6■□□□□ 0.57
H3F3B-208ENST00000589599 ATF7IP2Q5U623 682 aa18.6■□□□□ 0.57
H3F3B-208ENST00000589599 ATL3Q6DD88 541 aa18.6■□□□□ 0.57
H3F3B-208ENST00000589599 CCDC73Q6ZRK6 1079 aa18.6■□□□□ 0.57
H3F3B-208ENST00000589599 EP400NLQ6ZTU2 488 aa18.6■□□□□ 0.57
H3F3B-208ENST00000589599 LARP4BQ92615 738 aaKnown RBP18.6■□□□□ 0.57
H3F3B-208ENST00000589599 TMEM175Q9BSA9 504 aa18.6■□□□□ 0.57
H3F3B-208ENST00000589599 MRPL4Q9BYD3 311 aaKnown RBP18.6■□□□□ 0.57
H3F3B-208ENST00000589599 IGFLR1Q9H665 355 aa18.6■□□□□ 0.57
H3F3B-208ENST00000589599 UBE2ZQ9H832 354 aaPredicted RBP18.6■□□□□ 0.57
H3F3B-208ENST00000589599 NGRNQ9NPE2 291 aaKnown RBP18.6■□□□□ 0.57
H3F3B-208ENST00000589599 ARHGAP28Q9P2N2 729 aa18.6■□□□□ 0.57
H3F3B-208ENST00000589599 CFAP45Q9UL16 551 aa18.6■□□□□ 0.57
H3F3B-208ENST00000589599 USP20Q9Y2K6 914 aa18.6■□□□□ 0.57
H3F3B-208ENST00000589599 REV3LO60673 3130 aa18.59■□□□□ 0.57
H3F3B-208ENST00000589599 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.59■□□□□ 0.57
H3F3B-208ENST00000589599 NT5C1B-RDH14C9J2C7 533 aa18.59■□□□□ 0.57
H3F3B-208ENST00000589599 INPPL1O15357 1258 aa18.59■□□□□ 0.57
H3F3B-208ENST00000589599 NR1I2O75469 434 aa18.59■□□□□ 0.57
H3F3B-208ENST00000589599 FAM13AO94988 1023 aa18.59■□□□□ 0.57
H3F3B-208ENST00000589599 GALTP07902 379 aa18.59■□□□□ 0.57
H3F3B-208ENST00000589599 SCP2P22307 547 aa18.59■□□□□ 0.57
H3F3B-208ENST00000589599 IRS1P35568 1242 aa18.59■□□□□ 0.57
H3F3B-208ENST00000589599 MLH1P40692 756 aa18.59■□□□□ 0.57
H3F3B-208ENST00000589599 TFF2Q03403 129 aa18.59■□□□□ 0.57
H3F3B-208ENST00000589599 FOXD4L6Q3SYB3 417 aaPredicted RBP18.59■□□□□ 0.57
H3F3B-208ENST00000589599 FOXD4L3Q6VB84 417 aaPredicted RBP18.59■□□□□ 0.57
H3F3B-208ENST00000589599 ZNF280BQ86YH2 543 aa18.59■□□□□ 0.57
H3F3B-208ENST00000589599 MYCT1Q8N699 235 aa18.59■□□□□ 0.57
H3F3B-208ENST00000589599 PABPC5Q96DU9 382 aaKnown RBP18.59■□□□□ 0.57
H3F3B-208ENST00000589599 REEP2Q9BRK0 252 aa18.59■□□□□ 0.57
H3F3B-208ENST00000589599 TLE6Q9H808 572 aa18.59■□□□□ 0.57
H3F3B-208ENST00000589599 ENTPD7Q9NQZ7 604 aa18.59■□□□□ 0.57
H3F3B-208ENST00000589599 STK39Q9UEW8 545 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms