RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 MOXD1Q6UVY6 613 aa17.01■□□□□ 0.31
ACTN4-211ENST00000589528 B3GNT9Q6UX72 402 aa17.01■□□□□ 0.31
ACTN4-211ENST00000589528 SPATA31D4Q6ZUB0 917 aa17.01■□□□□ 0.31
ACTN4-211ENST00000589528 GET4Q7L5D6 327 aaPredicted RBP17.01■□□□□ 0.31
ACTN4-211ENST00000589528 KIAA2013Q8IYS2 634 aa17.01■□□□□ 0.31
ACTN4-211ENST00000589528 BLIDQ8IZY5 108 aa17.01■□□□□ 0.31
ACTN4-211ENST00000589528 RNF149Q8NC42 400 aa17.01■□□□□ 0.31
ACTN4-211ENST00000589528 TCP11Q8WWU5 503 aa17.01■□□□□ 0.31
ACTN4-211ENST00000589528 PRPF31Q8WWY3 499 aaKnown RBP17.01■□□□□ 0.31
ACTN4-211ENST00000589528 MINDY3Q9H8M7 445 aa17.01■□□□□ 0.31
ACTN4-211ENST00000589528 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.01■□□□□ 0.312e-7■■□□□ 14.5
ACTN4-211ENST00000589528 PPME1Q9Y570 386 aa17.01■□□□□ 0.31
ACTN4-211ENST00000589528 ARID2Q68CP9 1835 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 DMXL1Q9Y485 3027 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 ASAP2O43150 1006 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 GAS2O43903 313 aaKnown RBP17■□□□□ 0.31
ACTN4-211ENST00000589528 DCNP07585 359 aaKnown RBP17■□□□□ 0.31
ACTN4-211ENST00000589528 RPS6KB1P23443 525 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 PSMA5P28066 241 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 HOXA11P31270 313 aaPredicted RBP17■□□□□ 0.31
ACTN4-211ENST00000589528 MLH1P40692 756 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 UBXN11Q5T124 520 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 NOTUMQ6P988 496 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 TAS1R1Q7RTX1 841 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 DGLUCYQ7Z3D6 616 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 PALB2Q86YC2 1186 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 GLYCTKQ8IVS8 523 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 FANCMQ8IYD8 2048 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 COLGALT2Q8IYK4 626 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 HACE1Q8IYU2 909 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 GPR152Q8TDT2 470 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 MYADMQ96S97 322 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 COLEC11Q9BWP8 271 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 APOL6Q9BWW8 343 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 RHOBTB2Q9BYZ6 727 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 TRIM6Q9C030 488 aaPredicted RBP17■□□□□ 0.31
ACTN4-211ENST00000589528 PLEKHA4Q9H4M7 779 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 MARCH5Q9NX47 278 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 SIT1Q9Y3P8 196 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 IPPQ9Y573 584 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 MYH15Q9Y2K3 1946 aa17■□□□□ 0.31
ACTN4-211ENST00000589528 WDR87Q6ZQQ6 2873 aa16.99■□□□□ 0.31
ACTN4-211ENST00000589528 CACNA1IQ9P0X4 2223 aa16.99■□□□□ 0.31
ACTN4-211ENST00000589528 ARL5CA6NH57 179 aa16.99■□□□□ 0.31
ACTN4-211ENST00000589528 EML1O00423 815 aa16.99■□□□□ 0.31
ACTN4-211ENST00000589528 P4HBP07237 508 aaKnown RBP16.99■□□□□ 0.31
ACTN4-211ENST00000589528 PDIA3P30101 505 aaKnown RBP16.99■□□□□ 0.31
ACTN4-211ENST00000589528 AXLP30530 894 aa16.99■□□□□ 0.31
ACTN4-211ENST00000589528 EMC2Q15006 297 aa16.99■□□□□ 0.31
ACTN4-211ENST00000589528 INF2Q27J81 1249 aa16.99■□□□□ 0.31
ACTN4-211ENST00000589528 OTUD6AQ7L8S5 288 aa16.99■□□□□ 0.31
ACTN4-211ENST00000589528 HDAC7Q8WUI4 952 aa16.99■□□□□ 0.31
ACTN4-211ENST00000589528 GAD1Q99259 594 aa16.99■□□□□ 0.31
ACTN4-211ENST00000589528 DHX33Q9H6R0 707 aaKnown RBP16.99■□□□□ 0.31
ACTN4-211ENST00000589528 ARHGEF3Q9NR81 526 aa16.99■□□□□ 0.31
ACTN4-211ENST00000589528 SNX14Q9Y5W7 946 aa16.99■□□□□ 0.31
ACTN4-211ENST00000589528 DOCK6Q96HP0 2047 aa16.99■□□□□ 0.31
ACTN4-211ENST00000589528 SLC37A4O43826 429 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 DEXIO95424 95 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 SCNN1GP51170 649 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 DSG1Q02413 1049 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 CREMQ03060 361 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 PPP2R5CQ13362 524 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 KIAA0319Q5VV43 1072 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 GALNT17Q6IS24 598 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 PHLDB3Q6NSJ2 640 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 KRT25Q7Z3Z0 450 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 FERMT3Q86UX7 667 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 FBXL16Q8N461 479 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 ZNF579Q8NAF0 562 aaKnown RBP16.98■□□□□ 0.31
ACTN4-211ENST00000589528 SMG8Q8ND04 991 aaKnown RBP16.98■□□□□ 0.31
ACTN4-211ENST00000589528 RMDN1Q96DB5 314 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 FAM20AQ96MK3 541 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 MTRQ99707 1265 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 LXNQ9BS40 222 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 EIF2AQ9BY44 585 aaKnown RBP16.98■□□□□ 0.31
ACTN4-211ENST00000589528 NT5C3AQ9H0P0 336 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 RXFP1Q9HBX9 757 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.98■□□□□ 0.31
ACTN4-211ENST00000589528 ZDHHC7Q9NXF8 308 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 HES2Q9Y543 173 aa16.98■□□□□ 0.31
ACTN4-211ENST00000589528 CCDC194A0A1B0GVG4 234 aa16.97■□□□□ 0.31
ACTN4-211ENST00000589528 INO80B-WBP1J3KQ70 363 aa16.97■□□□□ 0.31
ACTN4-211ENST00000589528 TGM5O43548 720 aa16.97■□□□□ 0.31
ACTN4-211ENST00000589528 LAMP2P13473 410 aa16.97■□□□□ 0.31
ACTN4-211ENST00000589528 YWHABP31946 246 aaKnown RBP16.97■□□□□ 0.31
ACTN4-211ENST00000589528 HSPA4P34932 840 aa16.97■□□□□ 0.31
ACTN4-211ENST00000589528 DSC1Q08554 894 aa16.97■□□□□ 0.31
ACTN4-211ENST00000589528 TFDP1Q14186 410 aa16.97■□□□□ 0.31
ACTN4-211ENST00000589528 MXD4Q14582 209 aaPredicted RBP16.97■□□□□ 0.31
ACTN4-211ENST00000589528 PCBP1Q15365 356 aaKnown RBP eCLIP16.97■□□□□ 0.313e-7■■■□□ 17.9
ACTN4-211ENST00000589528 USP41Q3LFD5 358 aa16.97■□□□□ 0.31
ACTN4-211ENST00000589528 XKR9Q5GH70 373 aa16.97■□□□□ 0.31
ACTN4-211ENST00000589528 DCLRE1AQ6PJP8 1040 aa16.97■□□□□ 0.31
ACTN4-211ENST00000589528 CPLX2Q6PUV4 134 aaKnown RBP16.97■□□□□ 0.31
ACTN4-211ENST00000589528 SKAP1Q86WV1 359 aa16.97■□□□□ 0.31
ACTN4-211ENST00000589528 C1orf210Q8IVY1 113 aa16.97■□□□□ 0.31
ACTN4-211ENST00000589528 DAGLBQ8NCG7 672 aa16.97■□□□□ 0.31
ACTN4-211ENST00000589528 KCNB2Q92953 911 aa16.97■□□□□ 0.31
ACTN4-211ENST00000589528 ZNF707Q96C28 371 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms