RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 RPS6KA5O75582 802 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 PIGRP01833 764 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 NR3C1P04150 777 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 ADAM9Q13443 819 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 LRRC26Q2I0M4 334 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 CDKAL1Q5VV42 579 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 ZSWIM2Q8NEG5 633 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 NOC3LQ8WTT2 800 aaKnown RBP24.75■■□□□ 1.55
ACTN4-210ENST00000588618 POMGNT1Q8WZA1 660 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 CBWD1Q9BRT8 395 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 OSBPL7Q9BZF2 842 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 HAPLN2Q9GZV7 340 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 ANKFY1Q9P2R3 1169 aa24.75■■□□□ 1.55
ACTN4-210ENST00000588618 PITPNM1O00562 1244 aa24.74■■□□□ 1.55
ACTN4-210ENST00000588618 AP5Z1O43299 807 aa24.74■■□□□ 1.55
ACTN4-210ENST00000588618 FAM26DQ5JW98 314 aa24.74■■□□□ 1.55
ACTN4-210ENST00000588618 ATF7IP2Q5U623 682 aa24.74■■□□□ 1.55
ACTN4-210ENST00000588618 ZBTB45Q96K62 511 aaPredicted RBP24.74■■□□□ 1.55
ACTN4-210ENST00000588618 CNTNAP2Q9UHC6 1331 aa24.74■■□□□ 1.55
ACTN4-210ENST00000588618 CLDN3O15551 220 aa24.73■■□□□ 1.55
ACTN4-210ENST00000588618 TOM1L1O75674 476 aa24.73■■□□□ 1.55
ACTN4-210ENST00000588618 SELPP16109 830 aa24.73■■□□□ 1.55
ACTN4-210ENST00000588618 CYP2J2P51589 502 aa24.73■■□□□ 1.55
ACTN4-210ENST00000588618 RBL2Q08999 1139 aa24.73■■□□□ 1.55
ACTN4-210ENST00000588618 FAAP100Q0VG06 881 aa24.73■■□□□ 1.55
ACTN4-210ENST00000588618 LRRC8DQ7L1W4 858 aa24.73■■□□□ 1.55
ACTN4-210ENST00000588618 CREBRFQ8IUR6 639 aa24.73■■□□□ 1.55
ACTN4-210ENST00000588618 ACO2Q99798 780 aaKnown RBP24.73■■□□□ 1.55
ACTN4-210ENST00000588618 HIPK3Q9H422 1215 aa24.73■■□□□ 1.55
ACTN4-210ENST00000588618 DMAC2Q9NW81 257 aa24.73■■□□□ 1.55
ACTN4-210ENST00000588618 GPR182O15218 404 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 TSPAN1O60635 241 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 CLTBP09497 229 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 NFIL3Q16649 462 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 TSHZ1Q6ZSZ6 1077 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 FAM114A1Q8IWE2 563 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 USP38Q8NB14 1042 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 CEP63Q96MT8 703 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 ADPGKQ9BRR6 497 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 TMEM39AQ9NV64 488 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 MAGEC2Q9UBF1 373 aaPredicted RBP24.72■■□□□ 1.55
ACTN4-210ENST00000588618 NOC2LQ9Y3T9 749 aaKnown RBP24.72■■□□□ 1.55
ACTN4-210ENST00000588618 ABLIM1O14639 778 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 EXOC3O60645 756 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 GHRP10912 638 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 ARF4P18085 180 aaPredicted RBP24.72■■□□□ 1.55
ACTN4-210ENST00000588618 CDK11BP21127 795 aaKnown RBP24.72■■□□□ 1.55
ACTN4-210ENST00000588618 GARTP22102 1010 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 AXLP30530 894 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 CASP4P49662 377 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 NFX1Q12986 1120 aaKnown RBP24.72■■□□□ 1.55
ACTN4-210ENST00000588618 MYBPC2Q14324 1141 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 CEP135Q66GS9 1140 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 TRAF7Q6Q0C0 670 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 APBB1IPQ7Z5R6 666 aaPredicted RBP24.72■■□□□ 1.55
ACTN4-210ENST00000588618 ABHD8Q96I13 439 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 PCIF1Q9H4Z3 704 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 THAP9Q9H5L6 903 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 PIN4Q9Y237 131 aaKnown RBP24.72■■□□□ 1.55
ACTN4-210ENST00000588618 FRMD4BQ9Y2L6 1034 aa24.72■■□□□ 1.55
ACTN4-210ENST00000588618 PAK2Q13177 524 aa24.71■■□□□ 1.55
ACTN4-210ENST00000588618 HSP90AA2PQ14568 343 aaPredicted RBP24.71■■□□□ 1.55
ACTN4-210ENST00000588618 ZNF568Q3ZCX4 644 aa24.71■■□□□ 1.55
ACTN4-210ENST00000588618 FBXO47Q5MNV8 452 aa24.71■■□□□ 1.55
ACTN4-210ENST00000588618 NOTUMQ6P988 496 aa24.71■■□□□ 1.55
ACTN4-210ENST00000588618 FAM228AQ86W67 206 aa24.71■■□□□ 1.55
ACTN4-210ENST00000588618 CDR2LQ86X02 465 aaPredicted RBP24.71■■□□□ 1.55
ACTN4-210ENST00000588618 C12orf56Q8IXR9 622 aa24.71■■□□□ 1.55
ACTN4-210ENST00000588618 CPB2Q96IY4 423 aa24.71■■□□□ 1.55
ACTN4-210ENST00000588618 HSPBP1Q9NZL4 362 aa24.71■■□□□ 1.55
ACTN4-210ENST00000588618 TNFSF13BQ9Y275 285 aa24.71■■□□□ 1.55
ACTN4-210ENST00000588618 STYXL1Q9Y6J8 313 aa24.71■■□□□ 1.55
ACTN4-210ENST00000588618 SQORQ9Y6N5 450 aa24.71■■□□□ 1.55
ACTN4-210ENST00000588618 N4BP3O15049 544 aa24.7■■□□□ 1.54
ACTN4-210ENST00000588618 KIAA0391O15091 583 aaKnown RBP24.7■■□□□ 1.54
ACTN4-210ENST00000588618 HARSP12081 509 aaKnown RBP24.7■■□□□ 1.54
ACTN4-210ENST00000588618 MPZL3Q6UWV2 235 aa24.7■■□□□ 1.54
ACTN4-210ENST00000588618 SLC9A9Q8IVB4 645 aa24.7■■□□□ 1.54
ACTN4-210ENST00000588618 XXYLT1Q8NBI6 393 aa24.7■■□□□ 1.54
ACTN4-210ENST00000588618 ANKRD20A12PQ8NF67 263 aa24.7■■□□□ 1.54
ACTN4-210ENST00000588618 TMEM174Q8WUU8 243 aa24.7■■□□□ 1.54
ACTN4-210ENST00000588618 MSTO1Q9BUK6 570 aa24.7■■□□□ 1.54
ACTN4-210ENST00000588618 NOC4LQ9BVI4 516 aaKnown RBP24.7■■□□□ 1.54
ACTN4-210ENST00000588618 AGPAT5Q9NUQ2 364 aa24.7■■□□□ 1.54
ACTN4-210ENST00000588618 AKAP3O75969 853 aa24.69■■□□□ 1.54
ACTN4-210ENST00000588618 GNA14O95837 355 aa24.69■■□□□ 1.54
ACTN4-210ENST00000588618 NOLC1Q14978 699 aaKnown RBP eCLIP24.69■■□□□ 1.54
ACTN4-210ENST00000588618 UVSSAQ2YD98 709 aa24.69■■□□□ 1.54
ACTN4-210ENST00000588618 EEF1DP3Q658K8 133 aa24.69■■□□□ 1.54
ACTN4-210ENST00000588618 APTXQ7Z2E3 356 aaKnown RBP24.69■■□□□ 1.54
ACTN4-210ENST00000588618 UBE2Q1Q7Z7E8 422 aa24.69■■□□□ 1.54
ACTN4-210ENST00000588618 ZBTB33Q86T24 672 aa24.69■■□□□ 1.54
ACTN4-210ENST00000588618 PPP1R12CQ9BZL4 782 aa24.69■■□□□ 1.54
ACTN4-210ENST00000588618 PTPRHQ9HD43 1115 aa24.69■■□□□ 1.54
ACTN4-210ENST00000588618 PRDM5Q9NQX1 630 aaPredicted RBP24.69■■□□□ 1.54
ACTN4-210ENST00000588618 AGO2Q9UKV8 859 aaKnown RBP24.69■■□□□ 1.54
ACTN4-210ENST00000588618 ST3GAL5Q9UNP4 418 aa24.69■■□□□ 1.54
ACTN4-210ENST00000588618 EPB41P11171 864 aaKnown RBP24.69■■□□□ 1.54
ACTN4-210ENST00000588618 PROZP22891 400 aa24.69■■□□□ 1.54
ACTN4-210ENST00000588618 LPIN1Q14693 890 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms