RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 KCND2Q9NZV8 630 aa25.91■■□□□ 1.74
CHAF1A-205ENST00000587580 ALDH7A1P49419 539 aaKnown RBP25.9■■□□□ 1.74
CHAF1A-205ENST00000587580 PLCB3Q01970 1234 aa25.9■■□□□ 1.74
CHAF1A-205ENST00000587580 SLC39A14Q15043 492 aa25.9■■□□□ 1.74
CHAF1A-205ENST00000587580 AAK1Q2M2I8 961 aa25.9■■□□□ 1.74
CHAF1A-205ENST00000587580 SLC39A11Q8N1S5 342 aa25.9■■□□□ 1.74
CHAF1A-205ENST00000587580 MRPS27Q92552 414 aaKnown RBP25.9■■□□□ 1.74
CHAF1A-205ENST00000587580 EPSTI1Q96J88 318 aa25.9■■□□□ 1.74
CHAF1A-205ENST00000587580 NRDE2Q9H7Z3 1164 aa25.9■■□□□ 1.74
CHAF1A-205ENST00000587580 C17orf75Q9HAS0 396 aa25.9■■□□□ 1.74
CHAF1A-205ENST00000587580 KMT5AQ9NQR1 393 aa25.9■■□□□ 1.74
CHAF1A-205ENST00000587580 BLOC1S4Q9NUP1 217 aa25.9■■□□□ 1.74
CHAF1A-205ENST00000587580 USP20Q9Y2K6 914 aa25.9■■□□□ 1.74
CHAF1A-205ENST00000587580 MORC2Q9Y6X9 1032 aaPredicted RBP25.9■■□□□ 1.74
CHAF1A-205ENST00000587580 PHLPP2Q6ZVD8 1323 aa25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 SFI1A8K8P3 1242 aa25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 NT5C1B-RDH14C9J2C7 533 aa25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 ZSCAN22P10073 491 aaPredicted RBP25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 MLH1P40692 756 aa25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 NASPP49321 788 aaPredicted RBP25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 AFF1P51825 1210 aaKnown RBP25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 CACNB1Q02641 598 aaPredicted RBP25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 DHX8Q14562 1220 aaKnown RBP25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 STK38Q15208 465 aa25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 USP49Q70CQ1 688 aa25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 GPBP1Q86WP2 473 aa25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 RAD54LQ92698 747 aa25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 SYMPKQ92797 1274 aaKnown RBP25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 PPP2R3CQ969Q6 453 aa25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 ZNF396Q96N95 335 aaPredicted RBP25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 ADPGKQ9BRR6 497 aa25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 KANSL3Q9P2N6 904 aa25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 LZTS1Q9Y250 596 aa25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 PCDHGC5Q9Y5F6 944 aa25.89■■□□□ 1.74
CHAF1A-205ENST00000587580 BRWD1Q9NSI6 2320 aa25.88■■□□□ 1.73
CHAF1A-205ENST00000587580 NPHP3-ACAD11A0A0J9YXS1 232 aa25.88■■□□□ 1.73
CHAF1A-205ENST00000587580 K7ERI5 159 aa25.88■■□□□ 1.73
CHAF1A-205ENST00000587580 F13A1P00488 732 aa25.88■■□□□ 1.73
CHAF1A-205ENST00000587580 POMCP01189 267 aa25.88■■□□□ 1.73
CHAF1A-205ENST00000587580 KRT17Q04695 432 aa25.88■■□□□ 1.73
CHAF1A-205ENST00000587580 HYAL1Q12794 435 aa25.88■■□□□ 1.73
CHAF1A-205ENST00000587580 MCM6Q14566 821 aa25.88■■□□□ 1.73
CHAF1A-205ENST00000587580 KRI1Q8N9T8 703 aaKnown RBP25.88■■□□□ 1.73
CHAF1A-205ENST00000587580 MICAL1Q8TDZ2 1067 aa25.88■■□□□ 1.73
CHAF1A-205ENST00000587580 GAD1Q99259 594 aa25.88■■□□□ 1.73
CHAF1A-205ENST00000587580 ARHGAP28Q9P2N2 729 aa25.88■■□□□ 1.73
CHAF1A-205ENST00000587580 DNAJB4Q9UDY4 337 aa25.88■■□□□ 1.73
CHAF1A-205ENST00000587580 CCDC39Q9UFE4 941 aa25.88■■□□□ 1.73
CHAF1A-205ENST00000587580 PUF60Q9UHX1 559 aaKnown RBP25.88■■□□□ 1.73
CHAF1A-205ENST00000587580 GIT1Q9Y2X7 761 aa25.88■■□□□ 1.73
CHAF1A-205ENST00000587580 CARNS1A5YM72 827 aa25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 ARL5CA6NH57 179 aa25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 SLC16A4O15374 487 aa25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 B4GALT3O60512 393 aa25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 PLS3P13797 630 aa25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 AKAP5P24588 427 aa25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 TXLNAP40222 546 aa25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 ERVFC1P60507 584 aa25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 ARSHQ5FYA8 562 aa25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 EEF1DP3Q658K8 133 aa25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 EP400NLQ6ZTU2 488 aa25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 ADGRD2Q7Z7M1 963 aa25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 ZNF280BQ86YH2 543 aa25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 LARP4BQ92615 738 aaKnown RBP25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 PABPC5Q96DU9 382 aaKnown RBP25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 TMEM169Q96HH4 297 aa25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 ZFP42Q96MM3 310 aa25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 FAM193BQ96PV7 902 aaPredicted RBP25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 COL25A1Q9BXS0 654 aaPredicted RBP25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 PARP2Q9UGN5 583 aa25.87■■□□□ 1.73
CHAF1A-205ENST00000587580 TDRD15B5MCY1 1934 aaKnown RBP25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 INPPL1O15357 1258 aa25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 DDHD2O94830 711 aa25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 GALTP07902 379 aa25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 KCNA5P22460 613 aa25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 SLC11A1P49279 550 aa25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 SCNN1GP51170 649 aa25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 KCNQ1P51787 676 aa25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 PKP1Q13835 747 aa25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 NT5DC1Q5TFE4 455 aa25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 ATF7IP2Q5U623 682 aa25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 LINC00301Q8NCQ3 95 aa25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 REEP2Q9BRK0 252 aa25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 IGFLR1Q9H665 355 aa25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 TMEM134Q9H6X4 195 aa25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 ENTPD7Q9NQZ7 604 aa25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 CLDND1Q9NY35 253 aa25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 TFIP11Q9UBB9 837 aaKnown RBP25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 ODF2LQ9ULJ1 636 aa25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 RBM19Q9Y4C8 960 aaKnown RBP25.86■■□□□ 1.73
CHAF1A-205ENST00000587580 DLL1O00548 723 aa25.85■■□□□ 1.73
CHAF1A-205ENST00000587580 FSCN2O14926 492 aa25.85■■□□□ 1.73
CHAF1A-205ENST00000587580 GTF2F1P35269 517 aaKnown RBP eCLIP25.85■■□□□ 1.73
CHAF1A-205ENST00000587580 DCAF4L1Q3SXM0 396 aa25.85■■□□□ 1.73
CHAF1A-205ENST00000587580 FOXD4L6Q3SYB3 417 aaPredicted RBP25.85■■□□□ 1.73
CHAF1A-205ENST00000587580 PLPP4Q5VZY2 271 aa25.85■■□□□ 1.73
CHAF1A-205ENST00000587580 FOXD4L3Q6VB84 417 aaPredicted RBP25.85■■□□□ 1.73
CHAF1A-205ENST00000587580 TAS1R3Q7RTX0 852 aa25.85■■□□□ 1.73
CHAF1A-205ENST00000587580 TMEM173Q86WV6 379 aaPredicted RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms