RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 GRIN2CQ14957 1233 aa18.53■□□□□ 0.56
HMG20B-215ENST00000585741 ZNF618Q5T7W0 954 aa18.53■□□□□ 0.56
HMG20B-215ENST00000585741 RASIP1Q5U651 963 aa18.53■□□□□ 0.56
HMG20B-215ENST00000585741 APBB1IPQ7Z5R6 666 aaPredicted RBP18.53■□□□□ 0.56
HMG20B-215ENST00000585741 FAM200AQ8TCP9 573 aa18.53■□□□□ 0.56
HMG20B-215ENST00000585741 DHX38Q92620 1227 aaKnown RBP18.53■□□□□ 0.56
HMG20B-215ENST00000585741 WNT8BQ93098 351 aa18.53■□□□□ 0.56
HMG20B-215ENST00000585741 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.53■□□□□ 0.563e-7■■□□□ 14.4
HMG20B-215ENST00000585741 HIPK3Q9H422 1215 aa18.53■□□□□ 0.56
HMG20B-215ENST00000585741 CGNQ9P2M7 1197 aaKnown RBP18.53■□□□□ 0.56
HMG20B-215ENST00000585741 CHD9Q3L8U1 2897 aa18.52■□□□□ 0.56
HMG20B-215ENST00000585741 TRIP12Q14669 1992 aaPredicted RBP18.52■□□□□ 0.56
HMG20B-215ENST00000585741 GPR182O15218 404 aa18.52■□□□□ 0.56
HMG20B-215ENST00000585741 CSDE1O75534 798 aaKnown RBP18.52■□□□□ 0.56
HMG20B-215ENST00000585741 FOSL2P15408 326 aa18.52■□□□□ 0.56
HMG20B-215ENST00000585741 RPL13P26373 211 aaKnown RBP18.52■□□□□ 0.56
HMG20B-215ENST00000585741 SNRPFP62306 86 aaKnown RBP18.52■□□□□ 0.56
HMG20B-215ENST00000585741 KCNA1Q09470 495 aa18.52■□□□□ 0.56
HMG20B-215ENST00000585741 SLFN12LQ6IEE8 588 aa18.52■□□□□ 0.56
HMG20B-215ENST00000585741 MFSD5Q6N075 450 aa18.52■□□□□ 0.56
HMG20B-215ENST00000585741 ARMCX5Q6P1M9 558 aa18.52■□□□□ 0.56
HMG20B-215ENST00000585741 LRRC8DQ7L1W4 858 aa18.52■□□□□ 0.56
HMG20B-215ENST00000585741 NOC3LQ8WTT2 800 aaKnown RBP18.52■□□□□ 0.56
HMG20B-215ENST00000585741 CTAGE1Q96RT6 745 aa18.52■□□□□ 0.56
HMG20B-215ENST00000585741 ADPGKQ9BRR6 497 aa18.52■□□□□ 0.56
HMG20B-215ENST00000585741 STRA6Q9BX79 667 aa18.52■□□□□ 0.56
HMG20B-215ENST00000585741 FZD8Q9H461 694 aa18.52■□□□□ 0.56
HMG20B-215ENST00000585741 CDHR5Q9HBB8 845 aa18.52■□□□□ 0.56
HMG20B-215ENST00000585741 TTC28Q96AY4 2481 aa18.51■□□□□ 0.55
HMG20B-215ENST00000585741 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.51■□□□□ 0.55
HMG20B-215ENST00000585741 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.51■□□□□ 0.55
HMG20B-215ENST00000585741 PITPNM1O00562 1244 aa18.51■□□□□ 0.55
HMG20B-215ENST00000585741 CHRNA1P02708 482 aa18.51■□□□□ 0.55
HMG20B-215ENST00000585741 DNAJB2P25686 324 aa18.51■□□□□ 0.55
HMG20B-215ENST00000585741 MYL5Q02045 173 aa18.51■□□□□ 0.55
HMG20B-215ENST00000585741 NFX1Q12986 1120 aaKnown RBP18.51■□□□□ 0.55
HMG20B-215ENST00000585741 PAK2Q13177 524 aa18.51■□□□□ 0.55
HMG20B-215ENST00000585741 HSP90AA2PQ14568 343 aaPredicted RBP18.51■□□□□ 0.55
HMG20B-215ENST00000585741 FAM187BQ17R55 369 aa18.51■□□□□ 0.55
HMG20B-215ENST00000585741 TRIM71Q2Q1W2 868 aaKnown RBP18.51■□□□□ 0.55
HMG20B-215ENST00000585741 FAM26DQ5JW98 314 aa18.51■□□□□ 0.55
HMG20B-215ENST00000585741 CENPPQ6IPU0 288 aa18.51■□□□□ 0.55
HMG20B-215ENST00000585741 AOPEPQ8N6M6 819 aa18.51■□□□□ 0.55
HMG20B-215ENST00000585741 USP38Q8NB14 1042 aa18.51■□□□□ 0.55
HMG20B-215ENST00000585741 POMGNT1Q8WZA1 660 aa18.51■□□□□ 0.55
HMG20B-215ENST00000585741 KCNN1Q92952 543 aa18.51■□□□□ 0.55
HMG20B-215ENST00000585741 BPIFA3Q9BQP9 254 aa18.51■□□□□ 0.55
HMG20B-215ENST00000585741 TARS2Q9BW92 718 aaKnown RBP18.51■□□□□ 0.55
HMG20B-215ENST00000585741 PPP1R12CQ9BZL4 782 aa18.51■□□□□ 0.55
HMG20B-215ENST00000585741 CCDC113Q9H0I3 377 aa18.51■□□□□ 0.55
HMG20B-215ENST00000585741 MINDY3Q9H8M7 445 aa18.51■□□□□ 0.55
HMG20B-215ENST00000585741 TRIM49BA6NDI0 452 aa18.5■□□□□ 0.55
HMG20B-215ENST00000585741 N4BP3O15049 544 aa18.5■□□□□ 0.55
HMG20B-215ENST00000585741 CLIC2O15247 247 aa18.5■□□□□ 0.55
HMG20B-215ENST00000585741 PARNO95453 639 aaKnown RBP18.5■□□□□ 0.55
HMG20B-215ENST00000585741 GHRP10912 638 aa18.5■□□□□ 0.55
HMG20B-215ENST00000585741 FGFR4P22455 802 aa18.5■□□□□ 0.55
HMG20B-215ENST00000585741 AXLP30530 894 aa18.5■□□□□ 0.55
HMG20B-215ENST00000585741 RBL2Q08999 1139 aa18.5■□□□□ 0.55
HMG20B-215ENST00000585741 MGAT3Q09327 533 aa18.5■□□□□ 0.55
HMG20B-215ENST00000585741 TMEM240Q5SV17 173 aa18.5■□□□□ 0.55
HMG20B-215ENST00000585741 ATF7IP2Q5U623 682 aa18.5■□□□□ 0.55
HMG20B-215ENST00000585741 ANKRD40Q6AI12 368 aa18.5■□□□□ 0.55
HMG20B-215ENST00000585741 ZPBP2Q6X784 338 aa18.5■□□□□ 0.55
HMG20B-215ENST00000585741 TAS1R3Q7RTX0 852 aa18.5■□□□□ 0.55
HMG20B-215ENST00000585741 CSGALNACT2Q8N6G5 542 aa18.5■□□□□ 0.55
HMG20B-215ENST00000585741 RNF214Q8ND24 703 aa18.5■□□□□ 0.55
HMG20B-215ENST00000585741 ENOX1Q8TC92 643 aaKnown RBP18.5■□□□□ 0.55
HMG20B-215ENST00000585741 KCTD10Q9H3F6 313 aa18.5■□□□□ 0.55
HMG20B-215ENST00000585741 ANKFY1Q9P2R3 1169 aa18.5■□□□□ 0.55
HMG20B-215ENST00000585741 TRAF3IP3Q9Y228 551 aa18.5■□□□□ 0.55
HMG20B-215ENST00000585741 PIN4Q9Y237 131 aaKnown RBP18.5■□□□□ 0.55
HMG20B-215ENST00000585741 NOC2LQ9Y3T9 749 aaKnown RBP18.5■□□□□ 0.55
HMG20B-215ENST00000585741 SQORQ9Y6N5 450 aa18.5■□□□□ 0.55
HMG20B-215ENST00000585741 TULP1O00294 542 aaPredicted RBP18.49■□□□□ 0.55
HMG20B-215ENST00000585741 CETN3O15182 167 aa18.49■□□□□ 0.55
HMG20B-215ENST00000585741 CLDN3O15551 220 aa18.49■□□□□ 0.55
HMG20B-215ENST00000585741 ZSCAN20P17040 1043 aaPredicted RBP18.49■□□□□ 0.55
HMG20B-215ENST00000585741 FKBP3Q00688 224 aaKnown RBP18.49■□□□□ 0.55
HMG20B-215ENST00000585741 ADAM9Q13443 819 aa18.49■□□□□ 0.55
HMG20B-215ENST00000585741 EDRF1Q3B7T1 1238 aa18.49■□□□□ 0.55
HMG20B-215ENST00000585741 FBXO47Q5MNV8 452 aa18.49■□□□□ 0.55
HMG20B-215ENST00000585741 SPATA1Q5VX52 437 aa18.49■□□□□ 0.55
HMG20B-215ENST00000585741 NOTUMQ6P988 496 aa18.49■□□□□ 0.55
HMG20B-215ENST00000585741 TSHZ1Q6ZSZ6 1077 aa18.49■□□□□ 0.55
HMG20B-215ENST00000585741 CREBRFQ8IUR6 639 aa18.49■□□□□ 0.55
HMG20B-215ENST00000585741 FAM114A1Q8IWE2 563 aa18.49■□□□□ 0.55
HMG20B-215ENST00000585741 NOC4LQ9BVI4 516 aaKnown RBP18.49■□□□□ 0.55
HMG20B-215ENST00000585741 CBX8Q9HC52 389 aa18.49■□□□□ 0.55
HMG20B-215ENST00000585741 AGPAT3Q9NRZ7 376 aa18.49■□□□□ 0.55
HMG20B-215ENST00000585741 MAGEC2Q9UBF1 373 aaPredicted RBP18.49■□□□□ 0.55
HMG20B-215ENST00000585741 MUC3AQ02505 3323 aa18.49■□□□□ 0.55
HMG20B-215ENST00000585741 CNTNAP2Q9UHC6 1331 aa18.49■□□□□ 0.55
HMG20B-215ENST00000585741 GRXCR1A8MXD5 290 aa18.48■□□□□ 0.55
HMG20B-215ENST00000585741 IKBKBO14920 756 aa18.48■□□□□ 0.55
HMG20B-215ENST00000585741 KIAA0391O15091 583 aaKnown RBP18.48■□□□□ 0.55
HMG20B-215ENST00000585741 TSPAN1O60635 241 aa18.48■□□□□ 0.55
HMG20B-215ENST00000585741 TOM1L1O75674 476 aa18.48■□□□□ 0.55
HMG20B-215ENST00000585741 PIGRP01833 764 aa18.48■□□□□ 0.55
HMG20B-215ENST00000585741 NR3C1P04150 777 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms