RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 HDAC7Q8WUI4 952 aa11.97□□□□□ -0.49
CSNK1D-226ENST00000585026 BCL7CQ8WUZ0 217 aaPredicted RBP11.97□□□□□ -0.49
CSNK1D-226ENST00000585026 GJA10Q969M2 543 aa11.97□□□□□ -0.49
CSNK1D-226ENST00000585026 CCDC51Q96ER9 411 aa11.97□□□□□ -0.49
CSNK1D-226ENST00000585026 RPS6KC1Q96S38 1066 aa11.97□□□□□ -0.49
CSNK1D-226ENST00000585026 NAP1L4Q99733 375 aaKnown RBP11.97□□□□□ -0.49
CSNK1D-226ENST00000585026 SH2D3AQ9BRG2 576 aa11.97□□□□□ -0.49
CSNK1D-226ENST00000585026 IFT122Q9HBG6 1241 aa11.97□□□□□ -0.49
CSNK1D-226ENST00000585026 CIZ1Q9ULV3 898 aaPredicted RBP11.97□□□□□ -0.49
CSNK1D-226ENST00000585026 MYO10Q9HD67 2058 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 CCDC195A0A1B0GUA6 201 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 TMEM150BA6NC51 233 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 MEIS3P2A8K0S8 358 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 C2CD2LO14523 706 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 EDIL3O43854 480 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 LILRB3O75022 631 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 DDHD2O94830 711 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 GCFC2P16383 781 aaKnown RBP11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 XBP1P17861 261 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 NCLP19338 710 aaKnown RBP11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 OR1G1P47890 313 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 ID4P47928 161 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 GLUD2P49448 558 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 PPP2R5CQ13362 524 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 PLA2G4FQ68DD2 849 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 PRPF31Q8WWY3 499 aaKnown RBP11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 ZNF274Q96GC6 653 aaPredicted RBP11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 MBOAT7Q96N66 472 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 HERC2P3Q9BVR0 1158 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 COLEC11Q9BWP8 271 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 VN1R3Q9BXE9 311 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 PLEKHA4Q9H4M7 779 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 PIDD1Q9HB75 910 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 WDR6Q9NNW5 1121 aaKnown RBP11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 MAN1C1Q9NR34 630 aa11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.96□□□□□ -0.49
CSNK1D-226ENST00000585026 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.96□□□□□ -0.497e-8■■■■■ 49.6
CSNK1D-226ENST00000585026 CLUHO75153 1309 aa11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 CCDC194A0A1B0GVG4 234 aa11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 INPPL1O15357 1258 aa11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 POMCP01189 267 aa11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 NPR3P17342 541 aa11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 NPEPPSP55786 919 aa11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 CREMQ03060 361 aa11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 LAMTOR4Q0VGL1 99 aa11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 TFDP1Q14186 410 aa11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 MXD4Q14582 209 aaPredicted RBP11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 NOTUMQ6P988 496 aa11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 ZC3H14Q6PJT7 736 aaKnown RBP11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 C4orf19Q8IY42 314 aa11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 GPR65Q8IYL9 337 aa11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 RNF149Q8NC42 400 aa11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 SMG7Q92540 1137 aaKnown RBP11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 TMEM143Q96AN5 459 aa11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 TRIM6Q9C030 488 aaPredicted RBP11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 DHX33Q9H6R0 707 aaKnown RBP11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 RXFP1Q9HBX9 757 aa11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 NCOA5Q9HCD5 579 aaKnown RBP11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 EPS15L1Q9UBC2 864 aa11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 TPCN1Q9ULQ1 816 aa11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 PRG3Q9Y2Y8 225 aaPredicted RBP11.95□□□□□ -0.5
CSNK1D-226ENST00000585026 TBX3O15119 743 aa11.94□□□□□ -0.5
CSNK1D-226ENST00000585026 TEX28O15482 410 aa11.94□□□□□ -0.5
CSNK1D-226ENST00000585026 PI15O43692 258 aa11.94□□□□□ -0.5
CSNK1D-226ENST00000585026 BAG4O95429 457 aaKnown RBP11.94□□□□□ -0.5
CSNK1D-226ENST00000585026 LMNAP02545 664 aaKnown RBP11.94□□□□□ -0.5
CSNK1D-226ENST00000585026 CFHP08603 1231 aa11.94□□□□□ -0.5
CSNK1D-226ENST00000585026 SRFP11831 508 aa11.94□□□□□ -0.5
CSNK1D-226ENST00000585026 HOXA11P31270 313 aaPredicted RBP11.94□□□□□ -0.5
CSNK1D-226ENST00000585026 YWHABP31946 246 aaKnown RBP11.94□□□□□ -0.5
CSNK1D-226ENST00000585026 DSG1Q02413 1049 aa11.94□□□□□ -0.5
CSNK1D-226ENST00000585026 EPHA7Q15375 998 aa11.94□□□□□ -0.5
CSNK1D-226ENST00000585026 ME3Q16798 604 aa11.94□□□□□ -0.5
CSNK1D-226ENST00000585026 INF2Q27J81 1249 aa11.94□□□□□ -0.5
CSNK1D-226ENST00000585026 PPP4R3AQ6IN85 833 aa11.94□□□□□ -0.5
CSNK1D-226ENST00000585026 NEK8Q86SG6 692 aa11.94□□□□□ -0.5
CSNK1D-226ENST00000585026 COLGALT2Q8IYK4 626 aa11.94□□□□□ -0.5
CSNK1D-226ENST00000585026 ZSWIM4Q9H7M6 989 aa11.94□□□□□ -0.5
CSNK1D-226ENST00000585026 ZDHHC7Q9NXF8 308 aa11.94□□□□□ -0.5
CSNK1D-226ENST00000585026 M0R2N6 131 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 EML1O00423 815 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 B4GALT3O60512 393 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 CDKL5O76039 1030 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 HSP90AA1P07900 732 aaKnown RBP11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 PDIA4P13667 645 aaKnown RBP11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 POU5F1BQ06416 359 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 EMC2Q15006 297 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 USP41Q3LFD5 358 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 XKR9Q5GH70 373 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 UBXN11Q5T124 520 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 KIAA0319Q5VV43 1072 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 FERMT3Q86UX7 667 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 SLFN12Q8IYM2 578 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 SLC44A3Q8N4M1 653 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 SHDQ96IW2 340 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 CCDC43Q96MW1 224 aaKnown RBP11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 GAD1Q99259 594 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 MTRQ99707 1265 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 LXNQ9BS40 222 aa11.93□□□□□ -0.5
CSNK1D-226ENST00000585026 CSRNP2Q9H175 543 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms