RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 OSTNP61366 133 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 LRRC8EQ6NSJ5 796 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 C1orf54Q8WWF1 131 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 TSSK1BQ9BXA7 367 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 MOV10L1Q9BXT6 1211 aaKnown RBP13.83□□□□□ -0.2
RNF43-208ENST00000584437 IRX2Q9BZI1 471 aaPredicted RBP13.83□□□□□ -0.2
RNF43-208ENST00000584437 INPP5FQ9Y2H2 1132 aa13.83□□□□□ -0.2
RNF43-208ENST00000584437 RTN2O75298 545 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 CIITAP33076 1130 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 MRPS15P82914 257 aaKnown RBP13.82□□□□□ -0.2
RNF43-208ENST00000584437 GRM4Q14833 912 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 ZNF699Q32M78 642 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 ANGPTL8Q6UXH0 198 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 KRT27Q7Z3Y8 459 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 ENO4A6NNW6 628 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 PHF20L1A8MW92 1017 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 ARSEP51690 589 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 TNFAIP2Q03169 654 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 NR1I3Q14994 352 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 TRADDQ15628 312 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 NDUFAF2Q8N183 169 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 MMGT1Q8N4V1 131 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 ENAHQ8N8S7 591 aaPredicted RBP13.82□□□□□ -0.2
RNF43-208ENST00000584437 FBXO2Q9UK22 296 aaPredicted RBP13.82□□□□□ -0.2
RNF43-208ENST00000584437 FAM47DPA6NHR8 397 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 CLDN3O15551 220 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 SRGAP2CP0DJJ0 459 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 CDC27P30260 824 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 TMEM179Q6ZVK1 233 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 PASD1Q8IV76 773 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 OR6B3Q8NGW1 331 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 SNX19Q92543 992 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 CMTM5Q96DZ9 223 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 AGPAT1Q99943 283 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 SLC40A1Q9NP59 571 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 OLA1Q9NTK5 396 aaKnown RBP13.82□□□□□ -0.2
RNF43-208ENST00000584437 TBC1D22BQ9NU19 505 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 BARHL2Q9NY43 387 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 GNA15P30679 374 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 HOXA13P31271 388 aaPredicted RBP13.82□□□□□ -0.2
RNF43-208ENST00000584437 CYTH1Q15438 398 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 HABP4Q5JVS0 413 aaKnown RBP13.82□□□□□ -0.2
RNF43-208ENST00000584437 TMEM47Q9BQJ4 181 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 EML4Q9HC35 981 aaKnown RBP13.82□□□□□ -0.2
RNF43-208ENST00000584437 ZNF212Q9UDV6 495 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 FNDC3AQ9Y2H6 1198 aaKnown RBP13.82□□□□□ -0.2
RNF43-208ENST00000584437 ZNF185O15231 689 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 MAP4P27816 1152 aaKnown RBP13.82□□□□□ -0.2
RNF43-208ENST00000584437 RAP1GDS1P52306 607 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 IMPG1Q17R60 797 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 MTHFD1LQ6UB35 978 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 PARD3BQ8TEW8 1205 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 PARVAQ9NVD7 372 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 UVRAGQ9P2Y5 699 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 TUBE1Q9UJT0 475 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 ZHX2Q9Y6X8 837 aa13.82□□□□□ -0.2
RNF43-208ENST00000584437 PRAMEF22A3QJZ6 481 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 SLC16A3O15427 465 aaKnown RBP13.81□□□□□ -0.2
RNF43-208ENST00000584437 ENO1P06733 434 aaKnown RBP13.81□□□□□ -0.2
RNF43-208ENST00000584437 HNRNPH1P31943 449 aaKnown RBP13.81□□□□□ -0.2
RNF43-208ENST00000584437 ABI1Q8IZP0 508 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 CHP1Q99653 195 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 KIF2CQ99661 725 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 BSDC1Q9NW68 430 aaPredicted RBP13.81□□□□□ -0.2
RNF43-208ENST00000584437 MTO1Q9Y2Z2 717 aaKnown RBP13.81□□□□□ -0.2
RNF43-208ENST00000584437 USP6P35125 1406 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 PDXKO00764 312 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 FOXN1O15353 648 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 TMCC1O94876 653 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 PYGLP06737 847 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 KDSRQ06136 332 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 PTGISQ16647 500 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 ANKRD40Q6AI12 368 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 RWDD4Q6NW29 188 aaKnown RBP13.81□□□□□ -0.2
RNF43-208ENST00000584437 RIBC1Q8N443 379 aaPredicted RBP13.81□□□□□ -0.2
RNF43-208ENST00000584437 FAM167AQ96KS9 214 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 COG4Q9H9E3 785 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 BLOC1S6Q9UL45 172 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 TC2NQ8N9U0 490 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 DTX3LQ8TDB6 740 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 CCSER1Q9C0I3 900 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 PSMC3IPQ9P2W1 217 aaPredicted RBP13.81□□□□□ -0.2
RNF43-208ENST00000584437 ASAP1Q9ULH1 1129 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 STAP1Q9ULZ2 295 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 POTEB3A0JP26 581 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 POTECB2RU33 542 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 KIF28PB7ZC32 967 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 KLHL2O95198 593 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 CCDC159P0C7I6 412 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 ABCE1P61221 599 aaKnown RBP13.81□□□□□ -0.2
RNF43-208ENST00000584437 POU5F1BQ06416 359 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 ZNF394Q53GI3 561 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 POTEBQ6S5H4 581 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 NYAP1Q6ZVC0 841 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 ULK4Q96C45 1275 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 FAM129AQ9BZQ8 928 aa13.81□□□□□ -0.2
RNF43-208ENST00000584437 KRT8P05787 483 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 ZNF746Q6NUN9 644 aaPredicted RBP13.8□□□□□ -0.2
RNF43-208ENST00000584437 ADSSL1Q8N142 457 aa13.8□□□□□ -0.2
RNF43-208ENST00000584437 ERP27Q96DN0 273 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms