RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 PRKCBP05771 671 aa22.55■■□□□ 1.2
SS18-224ENST00000584083 LTBRP36941 435 aa22.55■■□□□ 1.2
SS18-224ENST00000584083 NDUFV1P49821 464 aa22.55■■□□□ 1.2
SS18-224ENST00000584083 ADAM15Q13444 863 aa22.55■■□□□ 1.2
SS18-224ENST00000584083 FAM187BQ17R55 369 aa22.55■■□□□ 1.2
SS18-224ENST00000584083 PUS10Q3MIT2 529 aaKnown RBP22.55■■□□□ 1.2
SS18-224ENST00000584083 HYIQ5T013 277 aa22.55■■□□□ 1.2
SS18-224ENST00000584083 ZNF280BQ86YH2 543 aa22.55■■□□□ 1.2
SS18-224ENST00000584083 GAD1Q99259 594 aa22.55■■□□□ 1.2
SS18-224ENST00000584083 KIFC3Q9BVG8 833 aa22.55■■□□□ 1.2
SS18-224ENST00000584083 RUSC1Q9BVN2 902 aa22.55■■□□□ 1.2
SS18-224ENST00000584083 NXF3Q9H4D5 531 aaKnown RBP22.55■■□□□ 1.2
SS18-224ENST00000584083 DNAJB4Q9UDY4 337 aa22.55■■□□□ 1.2
SS18-224ENST00000584083 CCDC169A6NNP5 214 aa22.54■■□□□ 1.2
SS18-224ENST00000584083 FSCN2O14926 492 aa22.54■■□□□ 1.2
SS18-224ENST00000584083 PER2O15055 1255 aa22.54■■□□□ 1.2
SS18-224ENST00000584083 HIP1RO75146 1068 aa22.54■■□□□ 1.2
SS18-224ENST00000584083 GALTP07902 379 aa22.54■■□□□ 1.2
SS18-224ENST00000584083 UBA7P41226 1012 aa22.54■■□□□ 1.2
SS18-224ENST00000584083 EFNA5P52803 228 aa22.54■■□□□ 1.2
SS18-224ENST00000584083 PEX3P56589 373 aa22.54■■□□□ 1.2
SS18-224ENST00000584083 DLX2Q07687 328 aaPredicted RBP22.54■■□□□ 1.2
SS18-224ENST00000584083 CLUL1Q15846 466 aa22.54■■□□□ 1.2
SS18-224ENST00000584083 RINT1Q6NUQ1 792 aa22.54■■□□□ 1.2
SS18-224ENST00000584083 KCTD17Q8N5Z5 321 aa22.54■■□□□ 1.2
SS18-224ENST00000584083 EFHBQ8N7U6 833 aa22.54■■□□□ 1.2
SS18-224ENST00000584083 SNX21Q969T3 373 aa22.54■■□□□ 1.2
SS18-224ENST00000584083 NGRNQ9NPE2 291 aaKnown RBP22.54■■□□□ 1.2
SS18-224ENST00000584083 GRXCR2A6NFK2 248 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 ARL5CA6NH57 179 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 ACKR2O00590 384 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 N4BP3O15049 544 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 DDHD2O94830 711 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 AKAP5P24588 427 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 CA8P35219 290 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 MLH1P40692 756 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 SLC11A1P49279 550 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 RESTQ13127 1097 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 BMS1Q14692 1282 aaKnown RBP22.53■■□□□ 1.2
SS18-224ENST00000584083 C1orf186Q6ZWK4 172 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 HSCBQ8IWL3 235 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 CALML4Q96GE6 196 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 IGSF21Q96ID5 467 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 DRC1Q96MC2 740 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 CCDC113Q9H0I3 377 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 FAM50BQ9Y247 325 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 USP20Q9Y2K6 914 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 GIT1Q9Y2X7 761 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 CLIC4Q9Y696 253 aa22.53■■□□□ 1.2
SS18-224ENST00000584083 TTLL13PA6NNM8 815 aa22.52■■□□□ 1.2
SS18-224ENST00000584083 K7ERI5 159 aa22.52■■□□□ 1.2
SS18-224ENST00000584083 B4GALT3O60512 393 aa22.52■■□□□ 1.2
SS18-224ENST00000584083 TBX10O75333 385 aa22.52■■□□□ 1.2
SS18-224ENST00000584083 ALDH2P05091 517 aa22.52■■□□□ 1.2
SS18-224ENST00000584083 DMP1Q13316 513 aaPredicted RBP22.52■■□□□ 1.2
SS18-224ENST00000584083 SMC1AQ14683 1233 aaKnown RBP22.52■■□□□ 1.2
SS18-224ENST00000584083 DUSP6Q16828 381 aa22.52■■□□□ 1.2
SS18-224ENST00000584083 FAM173BQ6P4H8 233 aa22.52■■□□□ 1.2
SS18-224ENST00000584083 TMEM173Q86WV6 379 aaPredicted RBP22.52■■□□□ 1.2
SS18-224ENST00000584083 SYT2Q8N9I0 419 aaPredicted RBP22.52■■□□□ 1.2
SS18-224ENST00000584083 RASSF8Q8NHQ8 419 aa22.52■■□□□ 1.2
SS18-224ENST00000584083 ZFP42Q96MM3 310 aa22.52■■□□□ 1.2
SS18-224ENST00000584083 CDCA3Q99618 268 aaPredicted RBP22.52■■□□□ 1.2
SS18-224ENST00000584083 ADPGKQ9BRR6 497 aa22.52■■□□□ 1.2
SS18-224ENST00000584083 TIPINQ9BVW5 301 aa22.52■■□□□ 1.2
SS18-224ENST00000584083 PDZD7Q9H5P4 517 aa22.52■■□□□ 1.2
SS18-224ENST00000584083 PARP2Q9UGN5 583 aa22.52■■□□□ 1.2
SS18-224ENST00000584083 FAN1Q9Y2M0 1017 aa22.52■■□□□ 1.2
SS18-224ENST00000584083 HIDE1A8MVS5 230 aa22.51■■□□□ 1.19
SS18-224ENST00000584083 SLC26A4O43511 780 aa22.51■■□□□ 1.19
SS18-224ENST00000584083 PLA2G4BP0C869 781 aa22.51■■□□□ 1.19
SS18-224ENST00000584083 IL9P15248 144 aa22.51■■□□□ 1.19
SS18-224ENST00000584083 LONP1P36776 959 aaKnown RBP22.51■■□□□ 1.19
SS18-224ENST00000584083 NPTX2P47972 431 aa22.51■■□□□ 1.19
SS18-224ENST00000584083 SCNN1GP51170 649 aa22.51■■□□□ 1.19
SS18-224ENST00000584083 GRIN1Q05586 938 aa22.51■■□□□ 1.19
SS18-224ENST00000584083 RAD51AP2Q09MP3 1159 aa22.51■■□□□ 1.19
SS18-224ENST00000584083 TMEM119Q4V9L6 283 aa22.51■■□□□ 1.19
SS18-224ENST00000584083 DAW1Q8N136 415 aa22.51■■□□□ 1.19
SS18-224ENST00000584083 VPS52Q8N1B4 723 aa22.51■■□□□ 1.19
SS18-224ENST00000584083 TMEM175Q9BSA9 504 aa22.51■■□□□ 1.19
SS18-224ENST00000584083 KMT5AQ9NQR1 393 aa22.51■■□□□ 1.19
SS18-224ENST00000584083 KLK14Q9P0G3 267 aa22.51■■□□□ 1.19
SS18-224ENST00000584083 MTMR6Q9Y217 621 aa22.51■■□□□ 1.19
SS18-224ENST00000584083 FSD2A1L4K1 749 aa22.5■■□□□ 1.19
SS18-224ENST00000584083 SFI1A8K8P3 1242 aa22.5■■□□□ 1.19
SS18-224ENST00000584083 STX6O43752 255 aa22.5■■□□□ 1.19
SS18-224ENST00000584083 CXCL14O95715 111 aa22.5■■□□□ 1.19
SS18-224ENST00000584083 HSP90AA1P07900 732 aaKnown RBP22.5■■□□□ 1.19
SS18-224ENST00000584083 GUCY2CP25092 1073 aa22.5■■□□□ 1.19
SS18-224ENST00000584083 CEBPZQ03701 1054 aaKnown RBP22.5■■□□□ 1.19
SS18-224ENST00000584083 DDX53Q86TM3 631 aaKnown RBP22.5■■□□□ 1.19
SS18-224ENST00000584083 MRPL43Q8N983 215 aaKnown RBP22.5■■□□□ 1.19
SS18-224ENST00000584083 BCL7CQ8WUZ0 217 aaPredicted RBP22.5■■□□□ 1.19
SS18-224ENST00000584083 MIOSQ9NXC5 875 aa22.5■■□□□ 1.19
SS18-224ENST00000584083 CD207Q9UJ71 328 aa22.5■■□□□ 1.19
SS18-224ENST00000584083 NRP1O14786 923 aa22.49■■□□□ 1.19
SS18-224ENST00000584083 INPPL1O15357 1258 aa22.49■■□□□ 1.19
SS18-224ENST00000584083 EDN1P05305 212 aa22.49■■□□□ 1.19
SS18-224ENST00000584083 OR1G1P47890 313 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms