RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, human

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-206	ENST00000583475	SCOC	Q9UIL1	159 aa		4.98	□□□□□ -1.61
VAPA-206	ENST00000583475	RPTOR	Q8N122	1335 aa		4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	CYP27B1	O15528	508 aa		4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	PRAMEF4	O60810	478 aa		4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	C1S	P09871	688 aa		4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	MTHFD2	P13995	350 aa		4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	GZMK	P49863	264 aa		4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	DGCR2	P98153	550 aa		4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	ZXDA	P98168	799 aa		4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	SRSF2	Q01130	221 aa	Known RBP	4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	ADRM1	Q16186	407 aa		4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	INAVA	Q3KP66	663 aa		4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	MIIP	Q5JXC2	388 aa		4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	CRIP3	Q6Q6R5	217 aa		4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	BTNL9	Q6UXG8	535 aa		4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	CNTD1	Q8N815	330 aa		4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	RIN2	Q8WYP3	895 aa	Predicted RBP	4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	IL17RA	Q96F46	866 aa		4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	PAWR	Q96IZ0	340 aa	Known RBP	4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	PUS7L	Q9H0K6	701 aa	Known RBP	4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	VPS11	Q9H270	941 aa		4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	CEP72	Q9P209	647 aa		4.97	□□□□□ -1.61
VAPA-206	ENST00000583475	ZMYM3	Q14202	1370 aa		4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	KLRG2	A4D1S0	409 aa	Predicted RBP	4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	GAST	P01350	101 aa		4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	GYPE	P15421	78 aa		4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	CDK11B	P21127	795 aa	Known RBP	4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	CANX	P27824	592 aa	Known RBP	4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	MTNR1B	P49286	362 aa		4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	CCT2	P78371	535 aa	Known RBP	4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	APBA1	Q02410	837 aa		4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	KLF1	Q13351	362 aa	Predicted RBP	4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	ANO4	Q32M45	955 aa		4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	HTR3D	Q70Z44	454 aa		4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	NECAB2	Q7Z6G3	386 aa		4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	CBARP	Q8N350	705 aa	Predicted RBP	4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	GPR156	Q8NFN8	814 aa		4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	ST8SIA2	Q92186	375 aa		4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	MNT	Q99583	582 aa		4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	PDCD2L	Q9BRP1	358 aa		4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	MENT	Q9BUN1	341 aa		4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	LSM14B	Q9BX40	385 aa	Known RBP	4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	DNAJC28	Q9NX36	388 aa		4.96	□□□□□ -1.62
VAPA-206	ENST00000583475	ITGA10	O75578	1167 aa		4.95	□□□□□ -1.62
VAPA-206	ENST00000583475	IPO13	O94829	963 aa	Known RBP	4.95	□□□□□ -1.62
VAPA-206	ENST00000583475	GNAT2	P19087	354 aa		4.95	□□□□□ -1.62
VAPA-206	ENST00000583475	ADSL	P30566	484 aa	Predicted RBP	4.95	□□□□□ -1.62
VAPA-206	ENST00000583475	MAN2A2	P49641	1150 aa		4.95	□□□□□ -1.62
VAPA-206	ENST00000583475	CDKN1C	P49918	316 aa	Predicted RBP	4.95	□□□□□ -1.62
VAPA-206	ENST00000583475	PPP3CA	Q08209	521 aa		4.95	□□□□□ -1.62
VAPA-206	ENST00000583475	CNGB1	Q14028	1251 aa	Predicted RBP	4.95	□□□□□ -1.62
VAPA-206	ENST00000583475	NAIF1	Q69YI7	327 aa	Predicted RBP	4.95	□□□□□ -1.62
VAPA-206	ENST00000583475		Q6ZVL8	140 aa		4.95	□□□□□ -1.62
VAPA-206	ENST00000583475	GPRIN1	Q7Z2K8	1008 aa		4.95	□□□□□ -1.62
VAPA-206	ENST00000583475	MB21D1	Q8N884	522 aa		4.95	□□□□□ -1.62
VAPA-206	ENST00000583475	CACTIN	Q8WUQ7	758 aa	Known RBP	4.95	□□□□□ -1.62
VAPA-206	ENST00000583475	PLEKHG4B	Q96PX9	1271 aa		4.95	□□□□□ -1.62
VAPA-206	ENST00000583475	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.95	□□□□□ -1.62
VAPA-206	ENST00000583475	GPR87	Q9BY21	358 aa		4.95	□□□□□ -1.62
VAPA-206	ENST00000583475	GREM2	Q9H772	168 aa		4.95	□□□□□ -1.62
VAPA-206	ENST00000583475	GPRC5D	Q9NZD1	345 aa		4.95	□□□□□ -1.62
VAPA-206	ENST00000583475	WASHC2A	Q641Q2	1341 aa		4.95	□□□□□ -1.62
VAPA-206	ENST00000583475	TRIM75P	A6NK02	468 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	AKR1B10	O60218	316 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	PHF2	O75151	1096 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	C6	P13671	934 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	OSM	P13725	252 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	TACR2	P21452	398 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	CRHR1	P34998	444 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	EVA1C	P58658	441 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	CRHR2	Q13324	411 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	TOB2	Q14106	344 aa	Predicted RBP	4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	CSRP2	Q16527	193 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	MUM1L1	Q5H9M0	696 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	METTL24	Q5JXM2	366 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	IGFL4	Q6B9Z1	124 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	DOK3	Q7L591	496 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	FAM83A	Q86UY5	434 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	XYLT1	Q86Y38	959 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	PRPF38A	Q8NAV1	312 aa	Known RBP	4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	OR52N2	Q8NGI0	321 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	MDM1	Q8TC05	714 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	SLC2A13	Q96QE2	648 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	CDC5L	Q99459	802 aa	Known RBP	4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	ACE2	Q9BYF1	805 aa	Predicted RBP	4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	CPEB1	Q9BZB8	566 aa	Known RBP	4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	EPC1	Q9H2F5	836 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	ZNF277	Q9NRM2	450 aa	Predicted RBP	4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	TRPS1	Q9UHF7	1281 aa		4.94	□□□□□ -1.62
VAPA-206	ENST00000583475	GRXCR1	A8MXD5	290 aa		4.93	□□□□□ -1.62
VAPA-206	ENST00000583475	GOLGA6L6	A8MZA4	724 aa		4.93	□□□□□ -1.62
VAPA-206	ENST00000583475	NPIPB8	E9PQR5	432 aa		4.93	□□□□□ -1.62
VAPA-206	ENST00000583475	WNT10B	O00744	389 aa		4.93	□□□□□ -1.62
VAPA-206	ENST00000583475	ADCY6	O43306	1168 aa		4.93	□□□□□ -1.62
VAPA-206	ENST00000583475	GSPT1	P15170	499 aa	Known RBP	4.93	□□□□□ -1.62

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