RNA–Protein interactions for RNA: ENST00000582980.1

CDH8-208, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 376 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-208ENST00000582980 CHST12Q9NRB3 414 aa13.57□□□□□ -0.24
CDH8-208ENST00000582980 AGPAT3Q9NRZ7 376 aa13.57□□□□□ -0.24
CDH8-208ENST00000582980 PADI3Q9ULW8 664 aa13.57□□□□□ -0.24
CDH8-208ENST00000582980 TRAF3IP3Q9Y228 551 aa13.57□□□□□ -0.24
CDH8-208ENST00000582980 PIN4Q9Y237 131 aaKnown RBP13.57□□□□□ -0.24
CDH8-208ENST00000582980 TNFSF13BQ9Y275 285 aa13.57□□□□□ -0.24
CDH8-208ENST00000582980 UMODL1Q5DID0 1318 aa13.57□□□□□ -0.24
CDH8-208ENST00000582980 TRIM43BA6NCK2 446 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 KIAA0391O15091 583 aaKnown RBP13.56□□□□□ -0.24
CDH8-208ENST00000582980 CLDN3O15551 220 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 B4GALT5O43286 388 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 TGFB1I1O43294 461 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 ZSCAN20P17040 1043 aaPredicted RBP13.56□□□□□ -0.24
CDH8-208ENST00000582980 GARTP22102 1010 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 RPL13P26373 211 aaKnown RBP13.56□□□□□ -0.24
CDH8-208ENST00000582980 ZNF165P49910 485 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 MBTPS1Q14703 1052 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 NFIL3Q16649 462 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 TPD52L1Q16890 204 aaPredicted RBP13.56□□□□□ -0.24
CDH8-208ENST00000582980 ZNF568Q3ZCX4 644 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 ZCWPW2Q504Y3 356 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 MFSD5Q6N075 450 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 MPZL3Q6UWV2 235 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 C12orf56Q8IXR9 622 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 POMGNT1Q8WZA1 660 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 SEPT8Q92599 483 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 APBB2Q92870 758 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 TRIM43Q96BQ3 446 aaPredicted RBP13.56□□□□□ -0.24
CDH8-208ENST00000582980 SCLYQ96I15 445 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 FTHL17Q9BXU8 183 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 SEMA6BQ9H3T3 888 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 AGO3Q9H9G7 860 aaKnown RBP13.56□□□□□ -0.24
CDH8-208ENST00000582980 ANKFY1Q9P2R3 1169 aa13.56□□□□□ -0.24
CDH8-208ENST00000582980 A0A1B0GUA9 196 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 SMTNL1A8MU46 457 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 NBNO60934 754 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 FGFR1OPO95684 399 aaKnown RBP13.55□□□□□ -0.24
CDH8-208ENST00000582980 CXCL10P02778 98 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 NR3C1P04150 777 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 EDN1P05305 212 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 PFKMP08237 780 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 STX17P56962 302 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 FKBP3Q00688 224 aaKnown RBP13.55□□□□□ -0.24
CDH8-208ENST00000582980 MYL5Q02045 173 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 MYBPC2Q14324 1141 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 NOLC1Q14978 699 aaKnown RBP eCLIP13.55□□□□□ -0.24
CDH8-208ENST00000582980 DCAF4L1Q3SXM0 396 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 PLEKHG4Q58EX7 1191 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 ANKRD40Q6AI12 368 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 TWF2Q6IBS0 349 aaKnown RBP13.55□□□□□ -0.24
CDH8-208ENST00000582980 TTI2Q6NXR4 508 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 SLC39A4Q6P5W5 647 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 SLC27A1Q6PCB7 646 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 DPF3Q92784 378 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 CPB2Q96IY4 423 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 TRIM6Q9C030 488 aaPredicted RBP13.55□□□□□ -0.24
CDH8-208ENST00000582980 PDZD7Q9H5P4 517 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 STYXL1Q9Y6J8 313 aa13.55□□□□□ -0.24
CDH8-208ENST00000582980 TRIM49BA6NDI0 452 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 TTLL13PA6NNM8 815 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 BECN2A8MW95 431 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 ANKRD63C9JTQ0 380 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 LDHAP00338 332 aaKnown RBP13.54□□□□□ -0.24
CDH8-208ENST00000582980 MCF2P10911 925 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 PROZP22891 400 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 NR2F2P24468 414 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 HOXA11P31270 313 aaPredicted RBP13.54□□□□□ -0.24
CDH8-208ENST00000582980 PMS1P54277 932 aaKnown RBP13.54□□□□□ -0.24
CDH8-208ENST00000582980 MCL1Q07820 350 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 KYAT1Q16773 422 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 SLC9A9Q8IVB4 645 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 HACE1Q8IYU2 909 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 RPUSD2Q8IZ73 545 aaKnown RBP13.54□□□□□ -0.24
CDH8-208ENST00000582980 CSGALNACT2Q8N6G5 542 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 ENOX1Q8TC92 643 aaKnown RBP13.54□□□□□ -0.24
CDH8-208ENST00000582980 FAM200AQ8TCP9 573 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 NOC3LQ8WTT2 800 aaKnown RBP13.54□□□□□ -0.24
CDH8-208ENST00000582980 TMEM174Q8WUU8 243 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 IKZF4Q9H2S9 585 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 KIAA1586Q9HCI6 787 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 PTPRHQ9HD43 1115 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 USP20Q9Y2K6 914 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 NR2E3Q9Y5X4 410 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 SCN5AQ14524 2016 aa13.54□□□□□ -0.24
CDH8-208ENST00000582980 MKI67P46013 3256 aaKnown RBP13.54□□□□□ -0.24
CDH8-208ENST00000582980 A0A0B4J269 797 aa13.53□□□□□ -0.24
CDH8-208ENST00000582980 TISP43B9A030 160 aa13.53□□□□□ -0.24
CDH8-208ENST00000582980 IKBKBO14920 756 aa13.53□□□□□ -0.24
CDH8-208ENST00000582980 CETN3O15182 167 aa13.53□□□□□ -0.24
CDH8-208ENST00000582980 CLIC2O15247 247 aa13.53□□□□□ -0.24
CDH8-208ENST00000582980 HARSP12081 509 aaKnown RBP13.53□□□□□ -0.24
CDH8-208ENST00000582980 SKIP12755 728 aa13.53□□□□□ -0.24
CDH8-208ENST00000582980 ADSSP30520 456 aa13.53□□□□□ -0.24
CDH8-208ENST00000582980 RAB27AP51159 221 aa13.53□□□□□ -0.24
CDH8-208ENST00000582980 CYP2J2P51589 502 aa13.53□□□□□ -0.24
CDH8-208ENST00000582980 TPM4P67936 248 aa13.53□□□□□ -0.24
CDH8-208ENST00000582980 PPIGQ13427 754 aaKnown RBP eCLIP13.53□□□□□ -0.24
CDH8-208ENST00000582980 SPATA1Q5VX52 437 aa13.53□□□□□ -0.24
CDH8-208ENST00000582980 EEF1DP3Q658K8 133 aa13.53□□□□□ -0.24
CDH8-208ENST00000582980 CNKSR3Q6P9H4 555 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms