RNA–Protein interactions for RNA: ENST00000581220.1

RIOK3-204, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 2,384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-204ENST00000581220 PTPN22Q9Y2R2 807 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 FOCADQ5VW36 1801 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 FOXN3O00409 490 aaPredicted RBP9.16□□□□□ -0.94
RIOK3-204ENST00000581220 IGF2BP3O00425 579 aaKnown RBP eCLIP9.16□□□□□ -0.94
RIOK3-204ENST00000581220 MEIS2O14770 477 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 LRRN2O75325 713 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 HLA-DOAP06340 250 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 TRIM49P0CI25 452 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 TRIM49CP0CI26 452 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 COPS2P61201 443 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 NCALDP61601 193 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 KCNJ2P63252 427 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 LRRC14Q15048 493 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 GPR162Q16538 588 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 ZC2HC1CQ53FD0 456 aaPredicted RBP9.16□□□□□ -0.94
RIOK3-204ENST00000581220 NUGGCQ68CJ6 796 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 TTC27Q6P3X3 843 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 AGAP11Q8TF27 550 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 ARHGEF2Q92974 986 aaKnown RBP9.16□□□□□ -0.94
RIOK3-204ENST00000581220 SERPINB12Q96P63 405 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 PARVGQ9HBI0 331 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 KCNK9Q9NPC2 374 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 FGFR1OP2Q9NVK5 253 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 GGT7Q9UJ14 662 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 ARL2BPQ9Y2Y0 163 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 L3MBTL1Q9Y468 752 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 ZNF831Q5JPB2 1677 aa9.16□□□□□ -0.94
RIOK3-204ENST00000581220 ZMYM2Q9UBW7 1377 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 UBE4BO95155 1302 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 TMEM120BA0PK00 339 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 O00370 1275 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 ECEL1O95672 775 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 APBA3O96018 575 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 OAS1P00973 400 aaKnown RBP9.15□□□□□ -0.94
RIOK3-204ENST00000581220 ALAS1P13196 640 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 COMTP21964 271 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 PAX7P23759 505 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 ALDH5A1P51649 535 aaPredicted RBP9.15□□□□□ -0.94
RIOK3-204ENST00000581220 LACTBP83111 547 aaPredicted RBP9.15□□□□□ -0.94
RIOK3-204ENST00000581220 ATP11AP98196 1134 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 SLC15A2Q16348 729 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 LONRF1Q17RB8 773 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 GALNTL6Q49A17 601 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 OTUD6AQ7L8S5 288 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 PALB2Q86YC2 1186 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 PIGOQ8TEQ8 1089 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 DCAF4Q8WV16 495 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 AMNQ9BXJ7 453 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 TRIM7Q9C029 511 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 BCAS3Q9H6U6 928 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 UBE2TQ9NPD8 197 aaPredicted RBP9.15□□□□□ -0.94
RIOK3-204ENST00000581220 RGL1Q9NZL6 768 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 SEL1LQ9UBV2 794 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 SPATA31A5Q5VU36 1347 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 SPATA31A7Q8IWB4 1347 aa9.15□□□□□ -0.94
RIOK3-204ENST00000581220 FAM86B1E9PN63 330 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 TULP1O00294 542 aaPredicted RBP9.15□□□□□ -0.95
RIOK3-204ENST00000581220 MSH4O15457 936 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 SPOPO43791 374 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 EXOC3O60645 756 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 RTN2O75298 545 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 ECM2O94769 699 aaPredicted RBP9.15□□□□□ -0.95
RIOK3-204ENST00000581220 FAM86B2P0C5J1 330 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 PYGMP11217 842 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 ALADP13716 330 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 SHMT1P34896 483 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 MARCKSL1P49006 195 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 BNIP1Q12981 228 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 COG2Q14746 738 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 TCEAL1Q15170 157 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 CYP1B1Q16678 543 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 UBAP2Q5T6F2 1119 aaKnown RBP9.15□□□□□ -0.95
RIOK3-204ENST00000581220 PHLDB3Q6NSJ2 640 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 SPATA21Q7Z572 469 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 SLC13A5Q86YT5 568 aaPredicted RBP9.15□□□□□ -0.95
RIOK3-204ENST00000581220 TPH2Q8IWU9 490 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 FAM178BQ8IXR5 827 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 RPUSD2Q8IZ73 545 aaKnown RBP9.15□□□□□ -0.95
RIOK3-204ENST00000581220 SYCP3Q8IZU3 236 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 KIRREL3Q8IZU9 778 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 ANKRD42Q8N9B4 389 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 CNBD1Q8NA66 436 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 TBC1D16Q8TBP0 767 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 CRYGNQ8WXF5 182 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 L3MBTL3Q96JM7 780 aaPredicted RBP9.15□□□□□ -0.95
RIOK3-204ENST00000581220 CCDC17Q96LX7 622 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 PLVAPQ9BX97 442 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 IKZF4Q9H2S9 585 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 USP40Q9NVE5 1235 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 STK38LQ9Y2H1 464 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 PCDHA3Q9Y5H8 950 aa9.15□□□□□ -0.95
RIOK3-204ENST00000581220 KIF3CO14782 793 aa9.14□□□□□ -0.95
RIOK3-204ENST00000581220 ACSL3O95573 720 aa9.14□□□□□ -0.95
RIOK3-204ENST00000581220 SREBF1P36956 1147 aa9.14□□□□□ -0.95
RIOK3-204ENST00000581220 PEX5P50542 639 aa9.14□□□□□ -0.95
RIOK3-204ENST00000581220 GTF2IP78347 998 aa9.14□□□□□ -0.95
RIOK3-204ENST00000581220 BFSP1Q12934 665 aa9.14□□□□□ -0.95
RIOK3-204ENST00000581220 MKRN3Q13064 507 aaKnown RBP9.14□□□□□ -0.95
RIOK3-204ENST00000581220 SLFN13Q68D06 897 aa9.14□□□□□ -0.95
RIOK3-204ENST00000581220 RNF207Q6ZRF8 634 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms