RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 SMARCE1Q969G3 411 aa9.39□□□□□ -0.91
SUPT4H1-206ENST00000581204 IFT43Q96FT9 208 aa9.39□□□□□ -0.91
SUPT4H1-206ENST00000581204 PAGE5Q96GU1 130 aa9.39□□□□□ -0.91
SUPT4H1-206ENST00000581204 RIT2Q99578 217 aa9.39□□□□□ -0.91
SUPT4H1-206ENST00000581204 NT5C3AQ9H0P0 336 aa9.39□□□□□ -0.91
SUPT4H1-206ENST00000581204 HIPK3Q9H422 1215 aa9.39□□□□□ -0.91
SUPT4H1-206ENST00000581204 CUEDC2Q9H467 287 aa9.39□□□□□ -0.91
SUPT4H1-206ENST00000581204 AGO4Q9HCK5 861 aaKnown RBP9.39□□□□□ -0.91
SUPT4H1-206ENST00000581204 ANO10Q9NW15 660 aa9.39□□□□□ -0.91
SUPT4H1-206ENST00000581204 CACNA1BQ00975 2339 aa9.39□□□□□ -0.91
SUPT4H1-206ENST00000581204 KIAA1217Q5T5P2 1943 aa9.39□□□□□ -0.91
SUPT4H1-206ENST00000581204 ZFHX2Q9C0A1 2572 aaPredicted RBP9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 DMXL1Q9Y485 3027 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 BIN1O00499 593 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 MAFGO15525 162 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 EIF3JO75822 258 aaKnown RBP9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 PSMD10O75832 226 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 PGK2P07205 417 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 ASGR1P07306 291 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 CCL23P55773 120 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 AMPD3Q01432 767 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 PPP2R5CQ13362 524 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 DHX8Q14562 1220 aaKnown RBP9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 L1TD1Q5T7N2 865 aaKnown RBP9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 SH3PXD2AQ5TCZ1 1133 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 ASCL5Q7RTU5 278 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 LYSMD3Q7Z3D4 306 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 BMP8AQ7Z5Y6 402 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 GRAMD1CQ8IYS0 662 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 FAM133AQ8N9E0 248 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 NEK9Q8TD19 979 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 GIPC2Q8TF65 315 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 STAMQ92783 540 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 GPRASP2Q96D09 838 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 CDHR1Q96JP9 859 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 GLT1D1Q96MS3 346 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 TINF2Q9BSI4 451 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 MMTAG2Q9BU76 263 aaKnown RBP9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 NOC4LQ9BVI4 516 aaKnown RBP9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 MAGEF1Q9HAY2 307 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 TBC1D22BQ9NU19 505 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 LMCD1Q9NZU5 365 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 STK17AQ9UEE5 414 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 VAV3Q9UKW4 847 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 SAMM50Q9Y512 469 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 CFAP47Q6ZTR5 3102 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 LCTP09848 1927 aa9.38□□□□□ -0.91
SUPT4H1-206ENST00000581204 MED19A0JLT2 244 aaPredicted RBP9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 FAM187AA6NFU0 413 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 PROB1E7EW31 1015 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 ZNF16P17020 682 aaPredicted RBP9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 MZF1P28698 734 aaPredicted RBP9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 CTSOP43234 321 aaPredicted RBP9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 NLRP12P59046 1061 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 SPIRE1Q08AE8 756 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 ZNF792Q3KQV3 632 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 ANO6Q4KMQ2 910 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 HERC4Q5GLZ8 1057 aaPredicted RBP9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 IER5Q5VY09 327 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 SEPT14Q6ZU15 432 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 SV2BQ7L1I2 683 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 MIER3Q7Z3K6 550 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 RNF214Q8ND24 703 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 RNF217Q8TC41 542 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 CCDC47Q96A33 483 aaKnown RBP9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 PNMA5Q96PV4 448 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 EIF2AK1Q9BQI3 630 aaKnown RBP9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 FUCA2Q9BTY2 467 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 LRRC27Q9C0I9 530 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 NAT10Q9H0A0 1025 aaKnown RBP9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 UPF3AQ9H1J1 476 aaKnown RBP9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 RBSNQ9H1K0 784 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 BLZF1Q9H2G9 400 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 UNC45AQ9H3U1 944 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 GRPEL1Q9HAV7 217 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 SLC5A4Q9NY91 659 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 PCDHA5Q9Y5H7 936 aa9.37□□□□□ -0.91
SUPT4H1-206ENST00000581204 GRIN2DO15399 1336 aa9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 DNAJC25-GNG10A0A024R161 153 aa9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 A0A1B0GTH6 734 aa9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 FSD2A1L4K1 749 aa9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 LCHNA4D1U4 455 aa9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 ASB14A6NK59 587 aa9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 TGFBR3LH3BV60 316 aa9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 TLR3O15455 904 aaKnown RBP9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 FZD6O60353 706 aa9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 MED24O75448 989 aa9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 CAVIN2O95810 425 aa9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 SSBP05455 408 aaKnown RBP eCLIP9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 MYL1P05976 194 aa9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 RPA1P27694 616 aa9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 IRS1P35568 1242 aa9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 SMCPP49901 116 aaPredicted RBP9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 CYP4A11Q02928 519 aa9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 EHHADHQ08426 723 aa9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 EPHA7Q15375 998 aa9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 TMEM119Q4V9L6 283 aa9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 NAALADL2Q58DX5 795 aa9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 ISM2Q6H9L7 571 aa9.36□□□□□ -0.91
SUPT4H1-206ENST00000581204 TMC7Q7Z402 723 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms