RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 EIF3BP55884 814 aaKnown RBP4.54□□□□□ -1.68
RTTN-206ENST00000581161 CAV3P56539 151 aa4.54□□□□□ -1.68
RTTN-206ENST00000581161 KLHL30Q0D2K2 578 aa4.54□□□□□ -1.68
RTTN-206ENST00000581161 SEC23AQ15436 765 aa4.54□□□□□ -1.68
RTTN-206ENST00000581161 VPS72Q15906 364 aa4.54□□□□□ -1.68
RTTN-206ENST00000581161 PTGISQ16647 500 aa4.54□□□□□ -1.68
RTTN-206ENST00000581161 TUBB8Q3ZCM7 444 aa4.54□□□□□ -1.68
RTTN-206ENST00000581161 VWA3BQ502W6 1294 aa4.54□□□□□ -1.68
RTTN-206ENST00000581161 TCEAL5Q5H9L2 206 aa4.54□□□□□ -1.68
RTTN-206ENST00000581161 AARS2Q5JTZ9 985 aaKnown RBP4.54□□□□□ -1.68
RTTN-206ENST00000581161 ARL6IP4Q66PJ3 421 aaKnown RBP4.54□□□□□ -1.68
RTTN-206ENST00000581161 SLC25A24Q6NUK1 477 aa4.54□□□□□ -1.68
RTTN-206ENST00000581161 CREG2Q8IUH2 290 aa4.54□□□□□ -1.68
RTTN-206ENST00000581161 APPL2Q8NEU8 664 aa4.54□□□□□ -1.68
RTTN-206ENST00000581161 DDI1Q8WTU0 396 aa4.54□□□□□ -1.68
RTTN-206ENST00000581161 TMEM60Q9H2L4 133 aa4.54□□□□□ -1.68
RTTN-206ENST00000581161 PARVGQ9HBI0 331 aa4.54□□□□□ -1.68
RTTN-206ENST00000581161 SARS2Q9NP81 518 aaKnown RBP4.54□□□□□ -1.68
RTTN-206ENST00000581161 PPARGC1AQ9UBK2 798 aaKnown RBP4.54□□□□□ -1.68
RTTN-206ENST00000581161 SRGAP2CP0DJJ0 459 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 HDLBPQ00341 1268 aaKnown RBP4.53□□□□□ -1.68
RTTN-206ENST00000581161 RPS6KA1Q15418 735 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 ASIC2Q16515 512 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 ANKS6Q68DC2 871 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 SUGP1Q8IWZ8 645 aaKnown RBP4.53□□□□□ -1.68
RTTN-206ENST00000581161 FAM133AQ8N9E0 248 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 FAM81AQ8TBF8 368 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 P3H4Q92791 437 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 NAF1Q96HR8 494 aaKnown RBP4.53□□□□□ -1.68
RTTN-206ENST00000581161 BCL2L14Q9BZR8 327 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 AZI2Q9H6S1 392 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 C6orf203Q9P0P8 240 aaPredicted RBP4.53□□□□□ -1.68
RTTN-206ENST00000581161 LARSQ9P2J5 1176 aaKnown RBP4.53□□□□□ -1.68
RTTN-206ENST00000581161 EPHB6O15197 1021 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 GLI1P08151 1106 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 YWHAQP27348 245 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 TJAP1Q5JTD0 557 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 SUSD4Q5VX71 490 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 TPTE2Q6XPS3 522 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 IRF2BP1Q8IU81 584 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 GIMAP8Q8ND71 665 aaPredicted RBP4.53□□□□□ -1.68
RTTN-206ENST00000581161 ZNF507Q8TCN5 953 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 SNX29Q8TEQ0 813 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 CASKIN2Q8WXE0 1202 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 PIK3R5Q8WYR1 880 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 TADA1Q96BN2 335 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 DACH2Q96NX9 599 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 ZBTB18Q99592 522 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 MTRQ99707 1265 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 EPN3Q9H201 632 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 EPS15L1Q9UBC2 864 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 ZC3H7BQ9UGR2 993 aaKnown RBP4.53□□□□□ -1.68
RTTN-206ENST00000581161 BRWD3Q6RI45 1802 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 ADAMTS3O15072 1205 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 BUB1BO60566 1050 aaPredicted RBP4.53□□□□□ -1.68
RTTN-206ENST00000581161 PPP1R37O75864 691 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 RHOBTB3O94955 611 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 TRIM37O94972 964 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 SERPINB2P05120 415 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 PYGBP11216 843 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 PTPN1P18031 435 aaKnown RBP4.53□□□□□ -1.68
RTTN-206ENST00000581161 CIITAP33076 1130 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 RASSF2P50749 326 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 DEUP1Q05D60 604 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 TXNRD1Q16881 649 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 KRT71Q3SY84 523 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 MEI1Q5TIA1 1274 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 KRT79Q5XKE5 535 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 TTC23LQ6PF05 361 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 STAG2Q8N3U4 1231 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 PNMA1Q8ND90 353 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 CCDC26Q8TAB7 109 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 FAM129AQ9BZQ8 928 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 MIS12Q9H081 205 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 RPAP3Q9H6T3 665 aaPredicted RBP4.53□□□□□ -1.68
RTTN-206ENST00000581161 ARHGEF3Q9NR81 526 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 KCNG1Q9UIX4 513 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 NOVA2Q9UNW9 492 aaKnown RBP4.53□□□□□ -1.68
RTTN-206ENST00000581161 GRIN2DO15399 1336 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 TMEM191CA6NGB0 347 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 TMEM191BP0C7N4 346 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 CCDC166P0CW27 439 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 LSP1P33241 339 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 MDH1P40925 334 aaKnown RBP4.53□□□□□ -1.68
RTTN-206ENST00000581161 EVX2Q03828 476 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 MAN2A1Q16706 1144 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 KDM7AQ6ZMT4 941 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 GDAP1Q8TB36 358 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 CCT8L2Q96SF2 557 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 MTA3Q9BTC8 594 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 KANSL2Q9H9L4 492 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 KLC4Q9NSK0 619 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 ARHGAP20Q9P2F6 1191 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 USP17L3A6NCW0 530 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 USP17L4A6NCW7 530 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 ERVV-1B6SEH8 477 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 H3BRJ5 948 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 H3BUI4 141 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 ZW10O43264 779 aa4.53□□□□□ -1.68
RTTN-206ENST00000581161 SHOX2O60902 331 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms