RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 MYBPC2Q14324 1141 aa15.64■□□□□ 0.09
SKA2-205ENST00000580541 DCAF4L1Q3SXM0 396 aa15.64■□□□□ 0.09
SKA2-205ENST00000580541 TWF2Q6IBS0 349 aaKnown RBP15.64■□□□□ 0.09
SKA2-205ENST00000580541 CNKSR3Q6P9H4 555 aa15.64■□□□□ 0.09
SKA2-205ENST00000580541 FOXR2Q6PJQ5 311 aa15.64■□□□□ 0.09
SKA2-205ENST00000580541 NELFCDQ8IXH7 590 aa15.64■□□□□ 0.09
SKA2-205ENST00000580541 SCLYQ96I15 445 aa15.64■□□□□ 0.09
SKA2-205ENST00000580541 TRIM6Q9C030 488 aaPredicted RBP15.64■□□□□ 0.09
SKA2-205ENST00000580541 AGO3Q9H9G7 860 aaKnown RBP15.64■□□□□ 0.09
SKA2-205ENST00000580541 C1orf112Q9NSG2 853 aa15.64■□□□□ 0.09
SKA2-205ENST00000580541 MAPK8IP1Q9UQF2 711 aa15.64■□□□□ 0.09
SKA2-205ENST00000580541 PPP1R3GB7ZBB8 358 aa15.63■□□□□ 0.09
SKA2-205ENST00000580541 NBNO60934 754 aa15.63■□□□□ 0.09
SKA2-205ENST00000580541 ARF4P18085 180 aaPredicted RBP15.63■□□□□ 0.09
SKA2-205ENST00000580541 GARTP22102 1010 aa15.63■□□□□ 0.09
SKA2-205ENST00000580541 CCNE1P24864 410 aa15.63■□□□□ 0.09
SKA2-205ENST00000580541 RAB27AP51159 221 aa15.63■□□□□ 0.09
SKA2-205ENST00000580541 PAK1Q13153 545 aa15.63■□□□□ 0.09
SKA2-205ENST00000580541 AMHR2Q16671 573 aa15.63■□□□□ 0.09
SKA2-205ENST00000580541 CENPPQ6IPU0 288 aa15.63■□□□□ 0.09
SKA2-205ENST00000580541 SLC27A1Q6PCB7 646 aa15.63■□□□□ 0.09
SKA2-205ENST00000580541 MPZL3Q6UWV2 235 aa15.63■□□□□ 0.09
SKA2-205ENST00000580541 TAS1R3Q7RTX0 852 aa15.63■□□□□ 0.09
SKA2-205ENST00000580541 DEFB128Q7Z7B8 93 aa15.63■□□□□ 0.09
SKA2-205ENST00000580541 SMYD4Q8IYR2 804 aaPredicted RBP15.63■□□□□ 0.09
SKA2-205ENST00000580541 POMGNT1Q8WZA1 660 aa15.63■□□□□ 0.09
SKA2-205ENST00000580541 P2RX5Q93086 422 aa15.63■□□□□ 0.09
SKA2-205ENST00000580541 TARS2Q9BW92 718 aaKnown RBP15.63■□□□□ 0.09
SKA2-205ENST00000580541 TRAIPQ9BWF2 469 aa15.63■□□□□ 0.09
SKA2-205ENST00000580541 KIAA1586Q9HCI6 787 aa15.63■□□□□ 0.09
SKA2-205ENST00000580541 IL23AQ9NPF7 189 aa15.63■□□□□ 0.09
SKA2-205ENST00000580541 TRAF3IP3Q9Y228 551 aa15.63■□□□□ 0.09
SKA2-205ENST00000580541 UMODL1Q5DID0 1318 aa15.63■□□□□ 0.09
SKA2-205ENST00000580541 ABHD14A-ACY1A0A1B0GW23 586 aa15.62■□□□□ 0.09
SKA2-205ENST00000580541 MCF2P10911 925 aa15.62■□□□□ 0.09
SKA2-205ENST00000580541 CSF2RAP15509 400 aa15.62■□□□□ 0.09
SKA2-205ENST00000580541 BMP6P22004 513 aa15.62■□□□□ 0.09
SKA2-205ENST00000580541 FGFR4P22455 802 aa15.62■□□□□ 0.09
SKA2-205ENST00000580541 HOXA11P31270 313 aaPredicted RBP15.62■□□□□ 0.09
SKA2-205ENST00000580541 MBTPS1Q14703 1052 aa15.62■□□□□ 0.09
SKA2-205ENST00000580541 NFIL3Q16649 462 aa15.62■□□□□ 0.09
SKA2-205ENST00000580541 TPD52L1Q16890 204 aaPredicted RBP15.62■□□□□ 0.09
SKA2-205ENST00000580541 EDRF1Q3B7T1 1238 aa15.62■□□□□ 0.09
SKA2-205ENST00000580541 ZNF568Q3ZCX4 644 aa15.62■□□□□ 0.09
SKA2-205ENST00000580541 KLHL10Q6JEL2 608 aa15.62■□□□□ 0.09
SKA2-205ENST00000580541 ARMCX5Q6P1M9 558 aa15.62■□□□□ 0.09
SKA2-205ENST00000580541 GLIS3Q8NEA6 775 aa15.62■□□□□ 0.09
SKA2-205ENST00000580541 DBF4BQ8NFT6 615 aa15.62■□□□□ 0.09
SKA2-205ENST00000580541 TMEM174Q8WUU8 243 aa15.62■□□□□ 0.09
SKA2-205ENST00000580541 NELFBQ8WX92 580 aa15.62■□□□□ 0.09
SKA2-205ENST00000580541 BADQ92934 168 aa15.62■□□□□ 0.09
SKA2-205ENST00000580541 GZF1Q9H116 711 aaPredicted RBP15.62■□□□□ 0.09
SKA2-205ENST00000580541 MTIF3Q9H2K0 278 aaKnown RBP15.62■□□□□ 0.09
SKA2-205ENST00000580541 KCTD10Q9H3F6 313 aa15.62■□□□□ 0.09
SKA2-205ENST00000580541 RWDD2AQ9UIY3 292 aa15.62■□□□□ 0.09
SKA2-205ENST00000580541 STYXL1Q9Y6J8 313 aa15.62■□□□□ 0.09
SKA2-205ENST00000580541 BAIAP3O94812 1187 aa15.61■□□□□ 0.09
SKA2-205ENST00000580541 FGBP02675 491 aa15.61■□□□□ 0.09
SKA2-205ENST00000580541 FKBP3Q00688 224 aaKnown RBP15.61■□□□□ 0.09
SKA2-205ENST00000580541 POU5F1Q01860 360 aaKnown RBP15.61■□□□□ 0.09
SKA2-205ENST00000580541 MCL1Q07820 350 aa15.61■□□□□ 0.09
SKA2-205ENST00000580541 KCNA1Q09470 495 aa15.61■□□□□ 0.09
SKA2-205ENST00000580541 NOLC1Q14978 699 aaKnown RBP eCLIP15.61■□□□□ 0.09
SKA2-205ENST00000580541 DPCR1Q3MIW9 517 aa15.61■□□□□ 0.09
SKA2-205ENST00000580541 PSRC1Q6PGN9 363 aaPredicted RBP15.61■□□□□ 0.09
SKA2-205ENST00000580541 SLC24A5Q71RS6 500 aa15.61■□□□□ 0.09
SKA2-205ENST00000580541 SLC9A9Q8IVB4 645 aa15.61■□□□□ 0.09
SKA2-205ENST00000580541 C12orf56Q8IXR9 622 aa15.61■□□□□ 0.09
SKA2-205ENST00000580541 PGBD4Q96DM1 585 aa15.61■□□□□ 0.09
SKA2-205ENST00000580541 CPB2Q96IY4 423 aa15.61■□□□□ 0.09
SKA2-205ENST00000580541 ADAM2Q99965 735 aa15.61■□□□□ 0.09
SKA2-205ENST00000580541 MSTO1Q9BUK6 570 aa15.61■□□□□ 0.09
SKA2-205ENST00000580541 FGFBP2Q9BYJ0 223 aa15.61■□□□□ 0.09
SKA2-205ENST00000580541 UBN1Q9NPG3 1134 aa15.61■□□□□ 0.09
SKA2-205ENST00000580541 RGS18Q9NS28 235 aa15.61■□□□□ 0.09
SKA2-205ENST00000580541 ANKFY1Q9P2R3 1169 aa15.61■□□□□ 0.09
SKA2-205ENST00000580541 FRMD4BQ9Y2L6 1034 aa15.61■□□□□ 0.09
SKA2-205ENST00000580541 A0A0B4J269 797 aa15.6■□□□□ 0.09
SKA2-205ENST00000580541 A0A0U1RQF3 1178 aa15.6■□□□□ 0.09
SKA2-205ENST00000580541 SMTNL1A8MU46 457 aa15.6■□□□□ 0.09
SKA2-205ENST00000580541 CETN3O15182 167 aa15.6■□□□□ 0.09
SKA2-205ENST00000580541 B4GALT5O43286 388 aa15.6■□□□□ 0.09
SKA2-205ENST00000580541 EOMESO95936 686 aa15.6■□□□□ 0.09
SKA2-205ENST00000580541 PROZP22891 400 aa15.6■□□□□ 0.09
SKA2-205ENST00000580541 ITGB8P26012 769 aa15.6■□□□□ 0.09
SKA2-205ENST00000580541 HOXD13P35453 343 aa15.6■□□□□ 0.09
SKA2-205ENST00000580541 ADAM9Q13443 819 aa15.6■□□□□ 0.09
SKA2-205ENST00000580541 GPNMBQ14956 572 aa15.6■□□□□ 0.09
SKA2-205ENST00000580541 LRSAM1Q6UWE0 723 aa15.6■□□□□ 0.09
SKA2-205ENST00000580541 USP37Q86T82 979 aa15.6■□□□□ 0.09
SKA2-205ENST00000580541 RSPH1Q8WYR4 309 aa15.6■□□□□ 0.09
SKA2-205ENST00000580541 CCDC94Q9BW85 323 aaPredicted RBP15.6■□□□□ 0.09
SKA2-205ENST00000580541 TSPYL2Q9H2G4 693 aaPredicted RBP15.6■□□□□ 0.09
SKA2-205ENST00000580541 PDZD7Q9H5P4 517 aa15.6■□□□□ 0.09
SKA2-205ENST00000580541 PTPRHQ9HD43 1115 aa15.6■□□□□ 0.09
SKA2-205ENST00000580541 AGPAT3Q9NRZ7 376 aa15.6■□□□□ 0.09
SKA2-205ENST00000580541 AGO2Q9UKV8 859 aaKnown RBP15.6■□□□□ 0.09
SKA2-205ENST00000580541 ZMYND8Q9ULU4 1186 aaPredicted RBP15.6■□□□□ 0.09
SKA2-205ENST00000580541 ALPK3Q96L96 1907 aa15.6■□□□□ 0.09
SKA2-205ENST00000580541 ANKRD63C9JTQ0 380 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms