RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 CFBP00751 764 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 LTFP02788 710 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 TYRP1P17643 537 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 AK2P54819 239 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 RPL11P62913 178 aaKnown RBP3.79□□□□□ -1.8
KPNB1-208ENST00000580019 PUM3Q15397 648 aaKnown RBP3.79□□□□□ -1.8
KPNB1-208ENST00000580019 SLC4A8Q2Y0W8 1093 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 STEAP3Q658P3 488 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 ICE2Q659A1 982 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 HEATR6Q6AI08 1181 aaKnown RBP3.79□□□□□ -1.8
KPNB1-208ENST00000580019 TTLL5Q6EMB2 1281 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 CEP68Q76N32 757 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 BRAPQ7Z569 592 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 STPG3Q8N7X2 389 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 PPHLN1Q8NEY8 458 aaKnown RBP3.79□□□□□ -1.8
KPNB1-208ENST00000580019 SNRNP27Q8WVK2 155 aaKnown RBP3.79□□□□□ -1.8
KPNB1-208ENST00000580019 PTPRN2Q92932 1015 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 PPP1R14AQ96A00 147 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 LENG9Q96B70 501 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 NUP88Q99567 741 aaPredicted RBP3.79□□□□□ -1.8
KPNB1-208ENST00000580019 MYD88Q99836 296 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 ORAI3Q9BRQ5 295 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 GBP3Q9H0R5 595 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 R3HDMLQ9H3Y0 253 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 TOR3AQ9H497 397 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 SLC52A2Q9HAB3 445 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 DDX21Q9NR30 783 aaKnown RBP eCLIP3.79□□□□□ -1.8
KPNB1-208ENST00000580019 C9orf78Q9NZ63 289 aaPredicted RBP3.79□□□□□ -1.8
KPNB1-208ENST00000580019 PHTF1Q9UMS5 762 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 FAM50BQ9Y247 325 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 IPPQ9Y573 584 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 MORC2Q9Y6X9 1032 aaPredicted RBP3.79□□□□□ -1.8
KPNB1-208ENST00000580019 SMARCA4P51532 1647 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 ADGRL1O94910 1474 aa3.79□□□□□ -1.8
KPNB1-208ENST00000580019 SPATA31A6Q5VVP1 1343 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 WASHC2AQ641Q2 1341 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.78□□□□□ -1.8
KPNB1-208ENST00000580019 MYADML2A6NDP7 307 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 TRAF5O00463 557 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 NOP56O00567 594 aaKnown RBP3.78□□□□□ -1.8
KPNB1-208ENST00000580019 ARHGAP6O43182 974 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 ULK1O75385 1050 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 PRKD3O94806 890 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 ITGAVP06756 1048 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 SETSIPP0DME0 302 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 HSPA6P17066 643 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 LPOP22079 712 aaPredicted RBP3.78□□□□□ -1.8
KPNB1-208ENST00000580019 POLD1P28340 1107 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 SERPINB3P29508 390 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 ID4P47928 161 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 GLRBP48167 497 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 IL2P60568 153 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 STK3Q13188 491 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 SIM2Q14190 667 aaPredicted RBP3.78□□□□□ -1.8
KPNB1-208ENST00000580019 ZNF460Q14592 562 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 GRM3Q14832 879 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 PRR16Q569H4 304 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 EMC4Q5J8M3 183 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 EPM2AIP1Q7L775 607 aaPredicted RBP3.78□□□□□ -1.8
KPNB1-208ENST00000580019 FGD2Q7Z6J4 655 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 SRLQ86TD4 932 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 PNMA8AQ86V59 439 aaPredicted RBP3.78□□□□□ -1.8
KPNB1-208ENST00000580019 ZNF227Q86WZ6 799 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 MYLK4Q86YV6 388 aaPredicted RBP3.78□□□□□ -1.8
KPNB1-208ENST00000580019 Q8N9P0 234 aaPredicted RBP3.78□□□□□ -1.8
KPNB1-208ENST00000580019 OSBP2Q969R2 916 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 SKA1Q96BD8 255 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 MPP4Q96JB8 637 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 GPR101Q96P66 508 aaPredicted RBP3.78□□□□□ -1.8
KPNB1-208ENST00000580019 C1orf112Q9NSG2 853 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 KLHL11Q9NVR0 708 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 ARHGAP20Q9P2F6 1191 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 CGGBP1Q9UFW8 167 aaPredicted RBP3.78□□□□□ -1.8
KPNB1-208ENST00000580019 SAP30BPQ9UHR5 308 aaKnown RBP3.78□□□□□ -1.8
KPNB1-208ENST00000580019 ZBTB21Q9ULJ3 1066 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 DMTF1Q9Y222 760 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 TIMM13Q9Y5L4 95 aaPredicted RBP3.78□□□□□ -1.8
KPNB1-208ENST00000580019 MRFAP1Q9Y605 127 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 KAT6BQ8WYB5 2073 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 FANCD2Q9BXW9 1451 aa3.78□□□□□ -1.8
KPNB1-208ENST00000580019 URB2Q14146 1524 aaKnown RBP3.77□□□□□ -1.81
KPNB1-208ENST00000580019 GRID2IPA4D2P6 1211 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 PIP5K1CO60331 668 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 NBNO60934 754 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 PPM1BO75688 479 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 IL33O95760 270 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 FAM163BP0C2L3 166 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 C6orf222P0C671 652 aaPredicted RBP3.77□□□□□ -1.81
KPNB1-208ENST00000580019 NAT1P18440 290 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 CLK3P49761 638 aaKnown RBP3.77□□□□□ -1.81
KPNB1-208ENST00000580019 RRADP55042 308 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 GEMIN4P57678 1058 aaKnown RBP3.77□□□□□ -1.81
KPNB1-208ENST00000580019 KRT85P78386 507 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 OCRLQ01968 901 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 KLF1Q13351 362 aaPredicted RBP3.77□□□□□ -1.81
KPNB1-208ENST00000580019 PTPAQ15257 358 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 SKIDA1Q1XH10 827 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 INF2Q27J81 1249 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 ABCB5Q2M3G0 1257 aa3.77□□□□□ -1.81
KPNB1-208ENST00000580019 ATP13A4Q4VNC1 1196 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms