RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 ST8SIA6P61647 398 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 SYTL3Q4VX76 610 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 CEP55Q53EZ4 464 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 ARMC6Q6NXE6 501 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 SYDE1Q6ZW31 735 aaPredicted RBP5.42□□□□□ -1.54
NF1-219ENST00000579081 BNIPLQ7Z465 357 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 MFN1Q8IWA4 741 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 KIAA2013Q8IYS2 634 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 MXD3Q9BW11 206 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 TSSK1BQ9BXA7 367 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 TOPORSQ9NS56 1045 aaPredicted RBP5.42□□□□□ -1.54
NF1-219ENST00000579081 ASNSD1Q9NWL6 643 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 CBFA2T3O75081 653 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 MAN2A1Q16706 1144 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 DEPDC1Q5TB30 811 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 PCNX4Q63HM2 1172 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 TRIM69Q86WT6 500 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 C2orf69Q8N8R5 385 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 SDR42E1Q8WUS8 393 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 P2RX5Q93086 422 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 PLEKHA8Q96JA3 519 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 NLRP4Q96MN2 994 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 FOPNLQ96NB1 174 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 MRPS26Q9BYN8 205 aaKnown RBP5.42□□□□□ -1.54
NF1-219ENST00000579081 PDE11AQ9HCR9 933 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 ABCB11O95342 1321 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 GOLGA8RI6L899 631 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 GCFC2P16383 781 aaKnown RBP5.42□□□□□ -1.54
NF1-219ENST00000579081 ETF1P62495 437 aaKnown RBP5.42□□□□□ -1.54
NF1-219ENST00000579081 CYLC2Q14093 348 aaPredicted RBP5.42□□□□□ -1.54
NF1-219ENST00000579081 THNSL1Q8IYQ7 743 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 DHTKD1Q96HY7 919 aaPredicted RBP5.42□□□□□ -1.54
NF1-219ENST00000579081 MTIF3Q9H2K0 278 aaKnown RBP5.42□□□□□ -1.54
NF1-219ENST00000579081 SLC52A2Q9HAB3 445 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 SAYSD1Q9NPB0 183 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 PCDHA5Q9Y5H7 936 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 NDUFB9Q9Y6M9 179 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 ERBB4Q15303 1308 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 NBNO60934 754 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 MARK3P27448 753 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 G2E3Q7L622 706 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 SLC35F6Q8N357 371 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 LSM14AQ8ND56 463 aaKnown RBP5.42□□□□□ -1.54
NF1-219ENST00000579081 BEST2Q8NFU1 509 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 MTERF3Q96E29 417 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 DDX50Q9BQ39 737 aaKnown RBP5.42□□□□□ -1.54
NF1-219ENST00000579081 TRIM8Q9BZR9 551 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 TMEM60Q9H2L4 133 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 SMARCAD1Q9H4L7 1026 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 TBC1D23Q9NUY8 699 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 ADA2Q9NZK5 511 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 AIPL1Q9NZN9 384 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 ZMYND8Q9ULU4 1186 aaPredicted RBP5.42□□□□□ -1.54
NF1-219ENST00000579081 PCF11O94913 1555 aaKnown RBP5.42□□□□□ -1.54
NF1-219ENST00000579081 A0A0G2JND7 137 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 H0Y626 953 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 TRIM16O95361 564 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 RALBP11234 206 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 BMP3P12645 472 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 HSPA2P54652 639 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 PRAMEP78395 509 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 DAB2IPQ5VWQ8 1189 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 ZFRQ96KR1 1074 aaKnown RBP5.42□□□□□ -1.54
NF1-219ENST00000579081 CARD9Q9H257 536 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 CAAP1Q9H8G2 361 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 FANCLQ9NW38 375 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 ZNF229Q9UJW7 825 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 CDC23Q9UJX2 597 aa5.42□□□□□ -1.54
NF1-219ENST00000579081 KANSL1LA0AUZ9 987 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 GADD45BO75293 160 aaPredicted RBP5.41□□□□□ -1.54
NF1-219ENST00000579081 FTCDO95954 541 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 SYDE2Q5VT97 1194 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 RINLQ6ZS11 566 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 DDIASQ8IXT1 998 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 FAM133AQ8N9E0 248 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 TTC13Q8NBP0 860 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 GCOM2Q9BZD3 368 aaPredicted RBP5.41□□□□□ -1.54
NF1-219ENST00000579081 PRDM16Q9HAZ2 1276 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 MAN1C1Q9NR34 630 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.41□□□□□ -1.54
NF1-219ENST00000579081 DCDC2Q9UHG0 476 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 PCDHA4Q9UN74 947 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 MED14O60244 1454 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 PRDM15P57071 1507 aaPredicted RBP5.41□□□□□ -1.54
NF1-219ENST00000579081 CDC42BPAQ5VT25 1732 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 RPS6KA5O75582 802 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 SPAG6O75602 509 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 TJP3O95049 919 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 FAM107AO95990 144 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 NUP107P57740 925 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 AP1B1Q10567 949 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 PTGDRQ13258 359 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 SPARCL1Q14515 664 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 ARMC3Q5W041 872 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 CC2D2BQ6DHV5 1058 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 PPP4R3CPQ6ZMV5 832 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 FAM160B2Q86V87 743 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 ARHGEF25Q86VW2 580 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 RASSF3Q86WH2 238 aa5.41□□□□□ -1.54
NF1-219ENST00000579081 BBS7Q8IWZ6 715 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms