RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 ZCWPW2Q504Y3 356 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 TCP11X2Q5H9J9 407 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 FAM26DQ5JW98 314 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 CDKAL1Q5VV42 579 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 MAP4K3Q8IVH8 894 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 KSR1Q8IVT5 923 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 RNF149Q8NC42 400 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 GLIS3Q8NEA6 775 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 BSNDQ8WZ55 320 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 OSMRQ99650 979 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 DUSP9Q99956 384 aaKnown RBP15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 CELF4Q9BZC1 486 aaKnown RBP15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 WNT8AQ9H1J5 351 aa15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 METTL14Q9HCE5 456 aaKnown RBP15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 SAMSN1Q9NSI8 373 aaKnown RBP15.24■□□□□ 0.03
CSNK1D-209ENST00000578904 A0A087WZ62 844 aa15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 SLC16A3O15427 465 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 GPR32O75388 356 aa15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 CHRNA1P02708 482 aa15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 NR3C1P04150 777 aa15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 IQCF3P0C7M6 154 aa15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 MTIF2P46199 727 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 LIG4P49917 911 aa15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 PMS1P54277 932 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 PPP2R3AQ06190 1150 aa15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 CCDC40Q4G0X9 1142 aa15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 ARMCX5Q6P1M9 558 aa15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 TRAF7Q6Q0C0 670 aa15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 APBB1IPQ7Z5R6 666 aaPredicted RBP15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 SRGAP1Q7Z6B7 1085 aa15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 USP37Q86T82 979 aa15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 SLC9A9Q8IVB4 645 aa15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 C12orf56Q8IXR9 622 aa15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 TMEM174Q8WUU8 243 aa15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 SCLYQ96I15 445 aa15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 FDXACB1Q9BRP7 624 aaPredicted RBP15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 MKNK1Q9BUB5 465 aa15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 MRPL4Q9BYD3 311 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 FGFBP2Q9BYJ0 223 aa15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 GCOM2Q9BZD3 368 aaPredicted RBP15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 ADAMTS10Q9H324 1103 aa15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 LIMA1Q9UHB6 759 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-209ENST00000578904 HNRNPDLO14979 420 aaKnown RBP15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 ADCY5O95622 1261 aa15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 GHRP10912 638 aa15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 GARTP22102 1010 aa15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 ITGB8P26012 769 aa15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 PSMC2P35998 433 aaKnown RBP15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 CRYBB1P53674 252 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 PTENP60484 403 aa15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 TMEM132AQ24JP5 1023 aa15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 CDCA2Q69YH5 1023 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 MFSD5Q6N075 450 aa15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 IFNLR1Q8IU57 520 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 TMEM199Q8N511 208 aa15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 MRFAP1L1Q96HT8 127 aa15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 CNOT6LQ96LI5 555 aaKnown RBP15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 PRIMPOLQ96LW4 560 aa15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 MED15Q96RN5 788 aa15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 CDHR5Q9HBB8 845 aa15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 KIAA1586Q9HCI6 787 aa15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 AGPAT3Q9NRZ7 376 aa15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 PRMT7Q9NVM4 692 aaPredicted RBP15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 LTBP2Q14767 1821 aa15.22■□□□□ 0.03
CSNK1D-209ENST00000578904 LRRC10BA6NIK2 292 aa15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 INO80B-WBP1J3KQ70 363 aa15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 TGFB1I1O43294 461 aa15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 EXOC3O60645 756 aa15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 PARNO95453 639 aaKnown RBP15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 LDHAP00338 332 aaKnown RBP15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 PIGRP01833 764 aa15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 DARSP14868 501 aaKnown RBP15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 CDC25BP30305 580 aa15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 RFC2P35250 354 aa15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 HOXD13P35453 343 aa15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 MATR3P43243 847 aaKnown RBP eCLIP15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 MBTPS1Q14703 1052 aa15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 FBXO47Q5MNV8 452 aa15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 CEP135Q66GS9 1140 aa15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 ZPBP2Q6X784 338 aa15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 FRMD5Q7Z6J6 570 aa15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 ZC3H3Q8IXZ2 948 aaKnown RBP15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 DRC7Q8IY82 874 aa15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 BADQ92934 168 aa15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 LBHD1Q9BQE6 289 aaPredicted RBP15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 KIFC3Q9BVG8 833 aa15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 IFNKQ9P0W0 207 aa15.21■□□□□ 0.03
CSNK1D-209ENST00000578904 N4BP3O15049 544 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 CLIC2O15247 247 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 MAPK13O15264 365 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 ERLIN2O94905 339 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 PRKCBP05771 671 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 ATP1A3P13637 1013 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 KRT13P13646 458 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 SFPQP23246 707 aaKnown RBP eCLIP15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 ZNF75DP51815 510 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 MARSP56192 900 aaKnown RBP15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 FPGSQ05932 587 aa15.2■□□□□ 0.02
CSNK1D-209ENST00000578904 KCNA1Q09470 495 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms