RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 MICALL1Q8N3F8 863 aa15.93■□□□□ 0.14
MKS1-207ENST00000578789 KCNG4Q8TDN1 519 aa15.93■□□□□ 0.14
MKS1-207ENST00000578789 REEP2Q9BRK0 252 aa15.93■□□□□ 0.14
MKS1-207ENST00000578789 KMT5AQ9NQR1 393 aa15.93■□□□□ 0.14
MKS1-207ENST00000578789 TBC1D13Q9NVG8 400 aa15.93■□□□□ 0.14
MKS1-207ENST00000578789 RBM19Q9Y4C8 960 aaKnown RBP15.93■□□□□ 0.14
MKS1-207ENST00000578789 TDRD15B5MCY1 1934 aaKnown RBP15.92■□□□□ 0.14
MKS1-207ENST00000578789 A0A087X0B3 334 aa15.92■□□□□ 0.14
MKS1-207ENST00000578789 K7ERI5 159 aa15.92■□□□□ 0.14
MKS1-207ENST00000578789 NPTXRO95502 500 aa15.92■□□□□ 0.14
MKS1-207ENST00000578789 UBE3AQ05086 875 aa15.92■□□□□ 0.14
MKS1-207ENST00000578789 DNM1Q05193 864 aaKnown RBP15.92■□□□□ 0.14
MKS1-207ENST00000578789 CAMK1Q14012 370 aa15.92■□□□□ 0.14
MKS1-207ENST00000578789 GIT2Q14161 759 aa15.92■□□□□ 0.14
MKS1-207ENST00000578789 CCDC85BQ15834 202 aaPredicted RBP15.92■□□□□ 0.14
MKS1-207ENST00000578789 FOXD4L6Q3SYB3 417 aaPredicted RBP15.92■□□□□ 0.14
MKS1-207ENST00000578789 LONRF3Q496Y0 759 aa15.92■□□□□ 0.14
MKS1-207ENST00000578789 AXDND1Q5T1B0 1012 aaPredicted RBP15.92■□□□□ 0.14
MKS1-207ENST00000578789 NT5DC1Q5TFE4 455 aa15.92■□□□□ 0.14
MKS1-207ENST00000578789 RRAGBQ5VZM2 374 aa15.92■□□□□ 0.14
MKS1-207ENST00000578789 KCNT2Q6UVM3 1135 aa15.92■□□□□ 0.14
MKS1-207ENST00000578789 FOXD4L3Q6VB84 417 aaPredicted RBP15.92■□□□□ 0.14
MKS1-207ENST00000578789 CDR2LQ86X02 465 aaPredicted RBP15.92■□□□□ 0.14
MKS1-207ENST00000578789 HACE1Q8IYU2 909 aa15.92■□□□□ 0.14
MKS1-207ENST00000578789 TMEM161BQ8NDZ6 487 aa15.92■□□□□ 0.14
MKS1-207ENST00000578789 SPPL3Q8TCT6 385 aa15.92■□□□□ 0.14
MKS1-207ENST00000578789 URGCPQ8TCY9 931 aa15.92■□□□□ 0.14
MKS1-207ENST00000578789 PPM1EQ8WY54 764 aa15.92■□□□□ 0.14
MKS1-207ENST00000578789 ZNF558Q96NG5 402 aa15.92■□□□□ 0.14
MKS1-207ENST00000578789 TRIM6Q9C030 488 aaPredicted RBP15.92■□□□□ 0.14
MKS1-207ENST00000578789 NXF3Q9H4D5 531 aaKnown RBP15.92■□□□□ 0.14
MKS1-207ENST00000578789 LARSQ9P2J5 1176 aaKnown RBP15.92■□□□□ 0.14
MKS1-207ENST00000578789 CFAP45Q9UL16 551 aa15.92■□□□□ 0.14
MKS1-207ENST00000578789 GIT1Q9Y2X7 761 aa15.92■□□□□ 0.14
MKS1-207ENST00000578789 CARNS1A5YM72 827 aa15.91■□□□□ 0.14
MKS1-207ENST00000578789 SFI1A8K8P3 1242 aa15.91■□□□□ 0.14
MKS1-207ENST00000578789 SLC16A4O15374 487 aa15.91■□□□□ 0.14
MKS1-207ENST00000578789 LIG1P18858 919 aa15.91■□□□□ 0.14
MKS1-207ENST00000578789 PPM1AP35813 382 aa15.91■□□□□ 0.14
MKS1-207ENST00000578789 NCKAP1LP55160 1127 aa15.91■□□□□ 0.14
MKS1-207ENST00000578789 PLCB3Q01970 1234 aa15.91■□□□□ 0.14
MKS1-207ENST00000578789 DHX8Q14562 1220 aaKnown RBP15.91■□□□□ 0.14
MKS1-207ENST00000578789 DCAF4L1Q3SXM0 396 aa15.91■□□□□ 0.14
MKS1-207ENST00000578789 ATF7IP2Q5U623 682 aa15.91■□□□□ 0.14
MKS1-207ENST00000578789 THNSL1Q8IYQ7 743 aa15.91■□□□□ 0.14
MKS1-207ENST00000578789 SLC39A11Q8N1S5 342 aa15.91■□□□□ 0.14
MKS1-207ENST00000578789 ADPGKQ9BRR6 497 aa15.91■□□□□ 0.14
MKS1-207ENST00000578789 NSUN3Q9H649 340 aaKnown RBP15.91■□□□□ 0.14
MKS1-207ENST00000578789 ALG13Q9NP73 1137 aaKnown RBP15.91■□□□□ 0.14
MKS1-207ENST00000578789 KANSL3Q9P2N6 904 aa15.91■□□□□ 0.14
MKS1-207ENST00000578789 LZTS1Q9Y250 596 aa15.91■□□□□ 0.14
MKS1-207ENST00000578789 TNFSF13BQ9Y275 285 aa15.91■□□□□ 0.14
MKS1-207ENST00000578789 INPP5FQ9Y2H2 1132 aa15.91■□□□□ 0.14
MKS1-207ENST00000578789 HES2Q9Y543 173 aa15.91■□□□□ 0.14
MKS1-207ENST00000578789 H0YCG3 227 aa15.9■□□□□ 0.14
MKS1-207ENST00000578789 FGF18O76093 207 aa15.9■□□□□ 0.14
MKS1-207ENST00000578789 MAPTP10636 758 aaKnown RBP15.9■□□□□ 0.14
MKS1-207ENST00000578789 SCP2P22307 547 aa15.9■□□□□ 0.14
MKS1-207ENST00000578789 DNAJB1P25685 340 aa15.9■□□□□ 0.14
MKS1-207ENST00000578789 STAT6P42226 847 aa15.9■□□□□ 0.14
MKS1-207ENST00000578789 AFF1P51825 1210 aaKnown RBP15.9■□□□□ 0.14
MKS1-207ENST00000578789 SMTNP53814 917 aa15.9■□□□□ 0.14
MKS1-207ENST00000578789 TMEM132AQ24JP5 1023 aa15.9■□□□□ 0.14
MKS1-207ENST00000578789 EEF1DP3Q658K8 133 aa15.9■□□□□ 0.14
MKS1-207ENST00000578789 SHC4Q6S5L8 630 aa15.9■□□□□ 0.14
MKS1-207ENST00000578789 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.9■□□□□ 0.14
MKS1-207ENST00000578789 POF1BQ8WVV4 589 aa15.9■□□□□ 0.14
MKS1-207ENST00000578789 ACO2Q99798 780 aaKnown RBP15.9■□□□□ 0.14
MKS1-207ENST00000578789 MRPL4Q9BYD3 311 aaKnown RBP15.9■□□□□ 0.14
MKS1-207ENST00000578789 NRDE2Q9H7Z3 1164 aa15.9■□□□□ 0.14
MKS1-207ENST00000578789 PARVGQ9HBI0 331 aa15.9■□□□□ 0.14
MKS1-207ENST00000578789 PTPRHQ9HD43 1115 aa15.9■□□□□ 0.14
MKS1-207ENST00000578789 RCOR1Q9UKL0 485 aa15.9■□□□□ 0.14
MKS1-207ENST00000578789 PCDHA7Q9UN72 937 aa15.9■□□□□ 0.14
MKS1-207ENST00000578789 USP20Q9Y2K6 914 aa15.9■□□□□ 0.14
MKS1-207ENST00000578789 ARL5CA6NH57 179 aa15.89■□□□□ 0.13
MKS1-207ENST00000578789 B4GALT3O60512 393 aa15.89■□□□□ 0.13
MKS1-207ENST00000578789 ZC3H11AO75152 810 aaKnown RBP eCLIP15.89■□□□□ 0.13
MKS1-207ENST00000578789 TBCAO75347 108 aaKnown RBP15.89■□□□□ 0.13
MKS1-207ENST00000578789 FAM13AO94988 1023 aa15.89■□□□□ 0.13
MKS1-207ENST00000578789 KRT18P05783 430 aaKnown RBP15.89■□□□□ 0.13
MKS1-207ENST00000578789 PROZP22891 400 aa15.89■□□□□ 0.13
MKS1-207ENST00000578789 PBX3P40426 434 aa15.89■□□□□ 0.13
MKS1-207ENST00000578789 MLH1P40692 756 aa15.89■□□□□ 0.13
MKS1-207ENST00000578789 BCAR1P56945 870 aa15.89■□□□□ 0.13
MKS1-207ENST00000578789 E2F4Q16254 413 aa15.89■□□□□ 0.13
MKS1-207ENST00000578789 SV2BQ7L1I2 683 aa15.89■□□□□ 0.13
MKS1-207ENST00000578789 MRPS27Q92552 414 aaKnown RBP15.89■□□□□ 0.13
MKS1-207ENST00000578789 FIZ1Q96SL8 496 aa15.89■□□□□ 0.13
MKS1-207ENST00000578789 GAD1Q99259 594 aa15.89■□□□□ 0.13
MKS1-207ENST00000578789 TMEM175Q9BSA9 504 aa15.89■□□□□ 0.13
MKS1-207ENST00000578789 APOL6Q9BWW8 343 aa15.89■□□□□ 0.13
MKS1-207ENST00000578789 PRDM6Q9NQX0 595 aa15.89■□□□□ 0.13
MKS1-207ENST00000578789 SPG21Q9NZD8 308 aa15.89■□□□□ 0.13
MKS1-207ENST00000578789 THEGQ9P2T0 379 aa15.89■□□□□ 0.13
MKS1-207ENST00000578789 TCHHQ07283 1943 aa15.89■□□□□ 0.13
MKS1-207ENST00000578789 MYMKA6NI61 221 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 ABLIM1O14639 778 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 FSCN2O14926 492 aa15.88■□□□□ 0.13
MKS1-207ENST00000578789 DDHD2O94830 711 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms