RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 PSMA7O14818 248 aa13.3□□□□□ -0.28
IFT20-207ENST00000578547 CCDC192P0DO97 292 aa13.3□□□□□ -0.28
IFT20-207ENST00000578547 ARF4P18085 180 aaPredicted RBP13.3□□□□□ -0.28
IFT20-207ENST00000578547 PCBP1Q15365 356 aaKnown RBP eCLIP13.3□□□□□ -0.28
IFT20-207ENST00000578547 KNOP1Q1ED39 458 aaKnown RBP13.3□□□□□ -0.28
IFT20-207ENST00000578547 BMT2Q1RMZ1 405 aa13.3□□□□□ -0.28
IFT20-207ENST00000578547 NOTUMQ6P988 496 aa13.3□□□□□ -0.28
IFT20-207ENST00000578547 ZBTB33Q86T24 672 aa13.3□□□□□ -0.28
IFT20-207ENST00000578547 RPUSD2Q8IZ73 545 aaKnown RBP13.3□□□□□ -0.28
IFT20-207ENST00000578547 MLKLQ8NB16 471 aa13.3□□□□□ -0.28
IFT20-207ENST00000578547 ACO2Q99798 780 aaKnown RBP13.3□□□□□ -0.28
IFT20-207ENST00000578547 TCHPQ9BT92 498 aa13.3□□□□□ -0.28
IFT20-207ENST00000578547 GBP3Q9H0R5 595 aa13.3□□□□□ -0.28
IFT20-207ENST00000578547 PDZD7Q9H5P4 517 aa13.3□□□□□ -0.28
IFT20-207ENST00000578547 ANO10Q9NW15 660 aa13.3□□□□□ -0.28
IFT20-207ENST00000578547 DACH1Q9UI36 760 aa13.3□□□□□ -0.28
IFT20-207ENST00000578547 PPP1R3GB7ZBB8 358 aa13.29□□□□□ -0.28
IFT20-207ENST00000578547 N4BP3O15049 544 aa13.29□□□□□ -0.28
IFT20-207ENST00000578547 MGEA5O60502 916 aa13.29□□□□□ -0.28
IFT20-207ENST00000578547 AXLP30530 894 aa13.29□□□□□ -0.28
IFT20-207ENST00000578547 PPP1R2P41236 205 aa13.29□□□□□ -0.28
IFT20-207ENST00000578547 STX17P56962 302 aa13.29□□□□□ -0.28
IFT20-207ENST00000578547 PAK1Q13153 545 aa13.29□□□□□ -0.28
IFT20-207ENST00000578547 ZNF568Q3ZCX4 644 aa13.29□□□□□ -0.28
IFT20-207ENST00000578547 PLEKHG4Q58EX7 1191 aa13.29□□□□□ -0.28
IFT20-207ENST00000578547 EEF1DP3Q658K8 133 aa13.29□□□□□ -0.28
IFT20-207ENST00000578547 TWF2Q6IBS0 349 aaKnown RBP13.29□□□□□ -0.28
IFT20-207ENST00000578547 SLC39A4Q6P5W5 647 aa13.29□□□□□ -0.28
IFT20-207ENST00000578547 ZPBP2Q6X784 338 aa13.29□□□□□ -0.28
IFT20-207ENST00000578547 C11orf57Q6ZUT1 292 aaPredicted RBP13.29□□□□□ -0.28
IFT20-207ENST00000578547 ZNF365Q70YC5 407 aa13.29□□□□□ -0.28
IFT20-207ENST00000578547 HS2ST1Q7LGA3 356 aa13.29□□□□□ -0.28
IFT20-207ENST00000578547 NOC3LQ8WTT2 800 aaKnown RBP13.29□□□□□ -0.28
IFT20-207ENST00000578547 NELFBQ8WX92 580 aa13.29□□□□□ -0.28
IFT20-207ENST00000578547 KCNN1Q92952 543 aa13.29□□□□□ -0.28
IFT20-207ENST00000578547 DNAJC25Q9H1X3 360 aa13.29□□□□□ -0.28
IFT20-207ENST00000578547 TMX1Q9H3N1 280 aa13.29□□□□□ -0.28
IFT20-207ENST00000578547 TET1Q8NFU7 2136 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 TRIM49BA6NDI0 452 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 CLIC2O15247 247 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 TGFB1I1O43294 461 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 TOM1L1O75674 476 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 NPTXRO95502 500 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 PIGRP01833 764 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 ZSCAN20P17040 1043 aaPredicted RBP13.28□□□□□ -0.28
IFT20-207ENST00000578547 HOXA11P31270 313 aaPredicted RBP13.28□□□□□ -0.28
IFT20-207ENST00000578547 CYP2J2P51589 502 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 ANO6Q4KMQ2 910 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 COBLL1Q53SF7 1204 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 TMEM240Q5SV17 173 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 ARMCX5Q6P1M9 558 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 CNKSR3Q6P9H4 555 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 SLC27A1Q6PCB7 646 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 MPZL3Q6UWV2 235 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 POMGNT1Q8WZA1 660 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 P2RX5Q93086 422 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 DHTKD1Q96HY7 919 aaPredicted RBP13.28□□□□□ -0.28
IFT20-207ENST00000578547 ZBTB45Q96K62 511 aaPredicted RBP13.28□□□□□ -0.28
IFT20-207ENST00000578547 TSG101Q99816 390 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 ADAM2Q99965 735 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 GDF15Q99988 308 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.28□□□□□ -0.28
IFT20-207ENST00000578547 ADPGKQ9BRR6 497 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 TRIM6Q9C030 488 aaPredicted RBP13.28□□□□□ -0.28
IFT20-207ENST00000578547 KCTD10Q9H3F6 313 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 SEMA6BQ9H3T3 888 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 PCIF1Q9H4Z3 704 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 AGPAT3Q9NRZ7 376 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 TYW1Q9NV66 732 aaKnown RBP13.28□□□□□ -0.28
IFT20-207ENST00000578547 TNFSF13BQ9Y275 285 aa13.28□□□□□ -0.28
IFT20-207ENST00000578547 A0A1B0GUA9 196 aa13.27□□□□□ -0.29
IFT20-207ENST00000578547 TULP1O00294 542 aaPredicted RBP13.27□□□□□ -0.29
IFT20-207ENST00000578547 CLDN3O15551 220 aa13.27□□□□□ -0.29
IFT20-207ENST00000578547 CALUO43852 315 aaPredicted RBP13.27□□□□□ -0.29
IFT20-207ENST00000578547 FGBP02675 491 aa13.27□□□□□ -0.29
IFT20-207ENST00000578547 PFKMP08237 780 aa13.27□□□□□ -0.29
IFT20-207ENST00000578547 CCNE1P24864 410 aa13.27□□□□□ -0.29
IFT20-207ENST00000578547 PMS1P54277 932 aaKnown RBP13.27□□□□□ -0.29
IFT20-207ENST00000578547 NOLC1Q14978 699 aaKnown RBP eCLIP13.27□□□□□ -0.29
IFT20-207ENST00000578547 APBB1IPQ7Z5R6 666 aaPredicted RBP13.27□□□□□ -0.29
IFT20-207ENST00000578547 RTN4RL1Q86UN2 441 aaPredicted RBP13.27□□□□□ -0.29
IFT20-207ENST00000578547 GOLGA5Q8TBA6 731 aa13.27□□□□□ -0.29
IFT20-207ENST00000578547 APBB2Q92870 758 aa13.27□□□□□ -0.29
IFT20-207ENST00000578547 SAAL1Q96ER3 474 aa13.27□□□□□ -0.29
IFT20-207ENST00000578547 CBWD1Q9BRT8 395 aa13.27□□□□□ -0.29
IFT20-207ENST00000578547 FUCA2Q9BTY2 467 aa13.27□□□□□ -0.29
IFT20-207ENST00000578547 MSTO1Q9BUK6 570 aa13.27□□□□□ -0.29
IFT20-207ENST00000578547 APOL6Q9BWW8 343 aa13.27□□□□□ -0.29
IFT20-207ENST00000578547 FTHL17Q9BXU8 183 aa13.27□□□□□ -0.29
IFT20-207ENST00000578547 EIF2AQ9BY44 585 aaKnown RBP13.27□□□□□ -0.29
IFT20-207ENST00000578547 CDT1Q9H211 546 aa13.27□□□□□ -0.29
IFT20-207ENST00000578547 CHST12Q9NRB3 414 aa13.27□□□□□ -0.29
IFT20-207ENST00000578547 BICDL2A1A5D9 508 aa13.26□□□□□ -0.29
IFT20-207ENST00000578547 GOLGA8IPA6NC78 632 aa13.26□□□□□ -0.29
IFT20-207ENST00000578547 GOLGA8JA6NMD2 632 aa13.26□□□□□ -0.29
IFT20-207ENST00000578547 PDXKO00764 312 aa13.26□□□□□ -0.29
IFT20-207ENST00000578547 NR3C1P04150 777 aa13.26□□□□□ -0.29
IFT20-207ENST00000578547 PROZP22891 400 aa13.26□□□□□ -0.29
IFT20-207ENST00000578547 OSTNP61366 133 aa13.26□□□□□ -0.29
IFT20-207ENST00000578547 IKBKEQ14164 716 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms