RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 CACNB1Q02641 598 aaPredicted RBP9.59□□□□□ -0.87
SMG6-216ENST00000575176 HYAL1Q12794 435 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 TFDP1Q14186 410 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 MCM6Q14566 821 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 CCDC85BQ15834 202 aaPredicted RBP9.59□□□□□ -0.87
SMG6-216ENST00000575176 LONRF3Q496Y0 759 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 TCEAL5Q5H9L2 206 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 NOTUMQ6P988 496 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 SHC4Q6S5L8 630 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 CEP120Q8N960 986 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 KIFAP3Q92845 792 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 DNAJC19Q96DA6 116 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 ZFP42Q96MM3 310 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 NTPCRQ9BSD7 190 aaKnown RBP9.59□□□□□ -0.87
SMG6-216ENST00000575176 STRA6Q9BX79 667 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 FGFBP2Q9BYJ0 223 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 NT5C3AQ9H0P0 336 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 LMAN2LQ9H0V9 348 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 NRDE2Q9H7Z3 1164 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 PRMT7Q9NVM4 692 aaPredicted RBP9.59□□□□□ -0.87
SMG6-216ENST00000575176 DNM3Q9UQ16 869 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 RWDD3Q9Y3V2 267 aa9.59□□□□□ -0.87
SMG6-216ENST00000575176 ACKR2O00590 384 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 HOXA2O43364 376 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 PPP6R2O75170 966 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 FGF18O76093 207 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 ERLIN2O94905 339 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 LAG3P18627 525 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 IBSPP21815 317 aaPredicted RBP9.58□□□□□ -0.88
SMG6-216ENST00000575176 IGFBP6P24592 240 aaPredicted RBP9.58□□□□□ -0.88
SMG6-216ENST00000575176 MLH1P40692 756 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 SLC11A1P49279 550 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 PEX3P56589 373 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 ERVFC1P60507 584 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 RBM10P98175 930 aaKnown RBP9.58□□□□□ -0.88
SMG6-216ENST00000575176 CEBPZQ03701 1054 aaKnown RBP9.58□□□□□ -0.88
SMG6-216ENST00000575176 DLX2Q07687 328 aaPredicted RBP9.58□□□□□ -0.88
SMG6-216ENST00000575176 RAD51AP2Q09MP3 1159 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 GIT2Q14161 759 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 TIGD5Q53EQ6 642 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 NOMO2Q5JPE7 1267 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 SLC39A4Q6P5W5 647 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 SLC27A1Q6PCB7 646 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 KCNT2Q6UVM3 1135 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 FEZF2Q8TBJ5 459 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 SPIRE2Q8WWL2 714 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 TIPINQ9BVW5 301 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 C2orf40Q9H1Z8 148 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 CDT1Q9H211 546 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 IKZF4Q9H2S9 585 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 RSAD1Q9HA92 442 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 KCND2Q9NZV8 630 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 THEGQ9P2T0 379 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 LRFN2Q9ULH4 789 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 SCN1AP35498 2009 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 NOTCH4Q99466 2003 aa9.58□□□□□ -0.88
SMG6-216ENST00000575176 DOCK8Q8NF50 2099 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 ARL5CA6NH57 179 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 MYMKA6NI61 221 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 SFI1A8K8P3 1242 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 LINC01565O15544 149 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 NPTXRO95502 500 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 GALTP07902 379 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 PLS3P13797 630 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 SCNN1GP51170 649 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 KCNQ1P51787 676 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 BCAR1P56945 870 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 DNM1Q05193 864 aaKnown RBP9.57□□□□□ -0.88
SMG6-216ENST00000575176 XKR4Q5GH76 650 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 FOXD4L5Q5VV16 416 aaPredicted RBP9.57□□□□□ -0.88
SMG6-216ENST00000575176 CD300LGQ6UXG3 332 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 GPBP1Q86WP2 473 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 COLGALT2Q8IYK4 626 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 MICALL1Q8N3F8 863 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 KRI1Q8N9T8 703 aaKnown RBP9.57□□□□□ -0.88
SMG6-216ENST00000575176 SPRYD3Q8NCJ5 442 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 RNF169Q8NCN4 708 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 POF1BQ8WVV4 589 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 FOXD4L4Q8WXT5 416 aaPredicted RBP9.57□□□□□ -0.88
SMG6-216ENST00000575176 RSPH1Q8WYR4 309 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 LARP4BQ92615 738 aaKnown RBP9.57□□□□□ -0.88
SMG6-216ENST00000575176 DRC1Q96MC2 740 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 CCDC43Q96MW1 224 aaKnown RBP9.57□□□□□ -0.88
SMG6-216ENST00000575176 GAD1Q99259 594 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 ACO2Q99798 780 aaKnown RBP9.57□□□□□ -0.88
SMG6-216ENST00000575176 MRPL9Q9BYD2 267 aaKnown RBP9.57□□□□□ -0.88
SMG6-216ENST00000575176 ZBP1Q9H171 429 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 NSUN3Q9H649 340 aaKnown RBP9.57□□□□□ -0.88
SMG6-216ENST00000575176 TMEM134Q9H6X4 195 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 C17orf75Q9HAS0 396 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 CACNG4Q9UBN1 327 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 ODF2LQ9ULJ1 636 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 LZTS1Q9Y250 596 aa9.57□□□□□ -0.88
SMG6-216ENST00000575176 DOCK6Q96HP0 2047 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 HIDE1A8MVS5 230 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 NT5C1B-RDH14C9J2C7 533 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 SPTLC2O15270 562 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 SLC16A4O15374 487 aa9.56□□□□□ -0.88
SMG6-216ENST00000575176 GTPBP6O43824 516 aaPredicted RBP9.56□□□□□ -0.88
SMG6-216ENST00000575176 RECQL4O94761 1208 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms