RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 PICK1Q9NRD5 415 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 KCNH7Q9NS40 1196 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 GABBR1Q9UBS5 961 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 DLEC1Q9Y238 1755 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 MAP3K13O43283 966 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 GNA14O95837 355 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 ADRA2BP18089 450 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 PRELPP51888 382 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 PSMD2Q13200 908 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 ORC1Q13415 861 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 EMC10Q5UCC4 262 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 CYP4F22Q6NT55 531 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 CBWD2Q8IUF1 395 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 LMBR1Q8WVP7 490 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 FAM167BQ9BTA0 163 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 GANQ9H2C0 597 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 AZI2Q9H6S1 392 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 NAGPAQ9UK23 515 aa9.17□□□□□ -0.94
RPAIN-215ENST00000575112 TTC7AQ9ULT0 858 aaPredicted RBP9.17□□□□□ -0.94
RPAIN-215ENST00000575112 SSU72P8A0A1W2PR75 194 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 TCRBV7S2A1N4TA0A589 114 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 DENND3A2RUS2 1198 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 ANKRD63C9JTQ0 380 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 PI4K2BG5E9Z4 385 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 PIAS1O75925 651 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 SLITRK3O94933 977 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 MMEP08473 750 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 SPATA31C1P0DKV0 1188 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 RPA1P27694 616 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 MXI1P50539 228 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 USP11P51784 963 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 DPY19L2P1Q6NXN4 242 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 HHIPL2Q6UWX4 724 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 NCAPG2Q86XI2 1143 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 RNF10Q8N5U6 811 aaKnown RBP9.16□□□□□ -0.94
RPAIN-215ENST00000575112 FBXO25Q8TCJ0 367 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 DCAF4Q8WV16 495 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 CPA5Q8WXQ8 436 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 ATG4CQ96DT6 458 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 PWWP2AQ96N64 755 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 WRNIP1Q96S55 665 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 INTS2Q9H0H0 1204 aaKnown RBP9.16□□□□□ -0.94
RPAIN-215ENST00000575112 SYNCQ9H7C4 482 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 A1CFQ9NQ94 594 aaKnown RBP9.16□□□□□ -0.94
RPAIN-215ENST00000575112 STK38LQ9Y2H1 464 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 CASZ1Q86V15 1759 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 LRP5O75197 1615 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 GOLGA8SH3BPF8 625 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 RXRBP28702 533 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 RPS6P62753 249 aaKnown RBP9.16□□□□□ -0.94
RPAIN-215ENST00000575112 GABPAQ06546 454 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 SLC29A2Q14542 456 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 HAUS6Q7Z4H7 955 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 TPCN2Q8NHX9 752 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 C18orf8Q96DM3 657 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 ZNF317Q96PQ6 595 aaPredicted RBP9.16□□□□□ -0.94
RPAIN-215ENST00000575112 KMT5AQ9NQR1 393 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 CTNNAL1Q9UBT7 734 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 NXF1Q9UBU9 619 aaKnown RBP9.16□□□□□ -0.94
RPAIN-215ENST00000575112 ANKRD36CQ5JPF3 1778 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 F5H423 210 aaPredicted RBP9.16□□□□□ -0.94
RPAIN-215ENST00000575112 PGRMC1O00264 195 aaKnown RBP9.16□□□□□ -0.94
RPAIN-215ENST00000575112 ZBED4O75132 1171 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 GH1P01241 217 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 GBP2P32456 591 aaPredicted RBP9.16□□□□□ -0.94
RPAIN-215ENST00000575112 HOXD13P35453 343 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 GKAP1Q5VSY0 366 aaPredicted RBP9.16□□□□□ -0.94
RPAIN-215ENST00000575112 SNRNP48Q6IEG0 339 aaKnown RBP9.16□□□□□ -0.94
RPAIN-215ENST00000575112 SPOPLQ6IQ16 392 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 PRUNE1Q86TP1 453 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 TRIM59Q8IWR1 403 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 CCDC26Q8TAB7 109 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 ZNF570Q96NI8 536 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 XPO6Q96QU8 1125 aaKnown RBP9.16□□□□□ -0.94
RPAIN-215ENST00000575112 PSMD1Q99460 953 aa9.16□□□□□ -0.94
RPAIN-215ENST00000575112 TYW1Q9NV66 732 aaKnown RBP9.16□□□□□ -0.94
RPAIN-215ENST00000575112 MGRN1O60291 552 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 UBOX5O94941 541 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 ANP32DO95626 131 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 BCRP11274 1271 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 RNF207Q6ZRF8 634 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 ARHGEF26Q96DR7 871 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 ZDHHC15Q96MV8 337 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 NYAP2Q9P242 653 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 ATXN2Q99700 1313 aaKnown RBP9.15□□□□□ -0.94
RPAIN-215ENST00000575112 ENO4A6NNW6 628 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 YDJCA8MPS7 323 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 GOLGA8MH3BSY2 632 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 DDX3XO00571 662 aaKnown RBP eCLIP9.15□□□□□ -0.942e-11■■■■■ 31.8
RPAIN-215ENST00000575112 ATP9AO75110 1047 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 RTN2O75298 545 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 SGPL1O95470 568 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 EYA4O95677 639 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 FMO5P49326 533 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 LIG4P49917 911 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 XRCC4Q13426 336 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 CRY2Q49AN0 593 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 NBPF12Q5TAG4 269 aaPredicted RBP9.15□□□□□ -0.94
RPAIN-215ENST00000575112 GADL1Q6ZQY3 521 aa9.15□□□□□ -0.94
RPAIN-215ENST00000575112 SIAH1Q8IUQ4 282 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms