RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 CLEC1BQ9P126 229 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 PCDHGC5Q9Y5F6 944 aa11.72□□□□□ -0.53
LITAF-216ENST00000574848 A0A1W2PQ27 194 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 A0A1W2PQ64 194 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 A0A1W2PQD8 194 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 C19orf67A6NJJ6 358 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 SPTLC2O15270 562 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 MBTPS2O43462 519 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 USO1O60763 962 aaKnown RBP11.71□□□□□ -0.53
LITAF-216ENST00000574848 OFD1O75665 1012 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 ERLIN2O94905 339 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 CSPG5O95196 566 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 PBX3P40426 434 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 NRIP1P48552 1158 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 BCAR1P56945 870 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 CEBPZQ03701 1054 aaKnown RBP11.71□□□□□ -0.53
LITAF-216ENST00000574848 ZP2Q05996 745 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 PDIA5Q14554 519 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 NOTUMQ6P988 496 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 POTEGQ6S5H5 508 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 TMEM184AQ6ZMB5 413 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 PPP4R3CPQ6ZMV5 832 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 POLR3FQ9H1D9 316 aaPredicted RBP11.71□□□□□ -0.53
LITAF-216ENST00000574848 TNMDQ9H2S6 317 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 RSAD1Q9HA92 442 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 CD320Q9NPF0 282 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.71□□□□□ -0.53
LITAF-216ENST00000574848 PUF60Q9UHX1 559 aaKnown RBP11.71□□□□□ -0.53
LITAF-216ENST00000574848 CD207Q9UJ71 328 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 PCDHB6Q9Y5E3 794 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 STK24Q9Y6E0 443 aa11.71□□□□□ -0.53
LITAF-216ENST00000574848 B4GALT3O60512 393 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 KINO60870 393 aaKnown RBP11.7□□□□□ -0.54
LITAF-216ENST00000574848 BMP15O95972 392 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 CCDC192P0DO97 292 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 ARF4P18085 180 aaPredicted RBP11.7□□□□□ -0.54
LITAF-216ENST00000574848 ALDH7A1P49419 539 aaKnown RBP11.7□□□□□ -0.54
LITAF-216ENST00000574848 NDUFV1P49821 464 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 KRT17Q04695 432 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 FAM187BQ17R55 369 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 ADALQ6DHV7 355 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 TMEM173Q86WV6 379 aaPredicted RBP11.7□□□□□ -0.54
LITAF-216ENST00000574848 GAS2L3Q86XJ1 694 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 ADHFE1Q8IWW8 467 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 GJD3Q8N144 294 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 LINC00301Q8NCQ3 95 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 SMG8Q8ND04 991 aaKnown RBP11.7□□□□□ -0.54
LITAF-216ENST00000574848 VN1R2Q8NFZ6 395 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 PRIMPOLQ96LW4 560 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 TCF25Q9BQ70 676 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 RAB34Q9BZG1 259 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 ZBP1Q9H171 429 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 CSRNP2Q9H175 543 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 NRDE2Q9H7Z3 1164 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 TLE6Q9H808 572 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 UBN1Q9NPG3 1134 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 GPRC5CQ9NQ84 441 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 STK39Q9UEW8 545 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 IPPQ9Y573 584 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 IRAK3Q9Y616 596 aa11.7□□□□□ -0.54
LITAF-216ENST00000574848 TDRD15B5MCY1 1934 aaKnown RBP11.69□□□□□ -0.54
LITAF-216ENST00000574848 INO80B-WBP1J3KQ70 363 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 ZC3H11AO75152 810 aaKnown RBP eCLIP11.69□□□□□ -0.54
LITAF-216ENST00000574848 PPP6R2O75170 966 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 CAVIN2O95810 425 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 GALTP07902 379 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 CYP11B2P19099 503 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 ATP2C1P98194 919 aaPredicted RBP11.69□□□□□ -0.54
LITAF-216ENST00000574848 FAM160A1Q05DH4 1040 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 PTGDRQ13258 359 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 SMC1AQ14683 1233 aaKnown RBP11.69□□□□□ -0.54
LITAF-216ENST00000574848 SLC39A14Q15043 492 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 ECM1Q16610 540 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 PLPP4Q5VZY2 271 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 PADI6Q6TGC4 694 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 EP400NLQ6ZTU2 488 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 URGCPQ8TCY9 931 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 BCL7CQ8WUZ0 217 aaPredicted RBP11.69□□□□□ -0.54
LITAF-216ENST00000574848 KHSRPQ92945 711 aaKnown RBP eCLIP11.69□□□□□ -0.54
LITAF-216ENST00000574848 TMEM169Q96HH4 297 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 IGSF21Q96ID5 467 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 POP1Q99575 1024 aaKnown RBP11.69□□□□□ -0.54
LITAF-216ENST00000574848 TMEM175Q9BSA9 504 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 C1QTNF1Q9BXJ1 281 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 EIF2AQ9BY44 585 aaKnown RBP11.69□□□□□ -0.54
LITAF-216ENST00000574848 FZD8Q9H461 694 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 CLSTN2Q9H4D0 955 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 IGFLR1Q9H665 355 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 ENTPD7Q9NQZ7 604 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 KANSL3Q9P2N6 904 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 LRWD1Q9UFC0 647 aa11.69□□□□□ -0.54
LITAF-216ENST00000574848 BARX2Q9UMQ3 279 aaPredicted RBP11.69□□□□□ -0.54
LITAF-216ENST00000574848 C5orf42Q9H799 3197 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 A0A087WWV3 80 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 A0A1B0GUA9 196 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 ARHGEF35A5YM69 484 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 C2orf71A6NGG8 1288 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 HIDE1A8MVS5 230 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 PI4K2BG5E9Z4 385 aa11.68□□□□□ -0.54
LITAF-216ENST00000574848 B4GALT5O43286 388 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms