RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 TMC7Q7Z402 723 aa21.79■■□□□ 1.08
SCARF1-208ENST00000574545 KCNK18Q7Z418 384 aa21.79■■□□□ 1.08
SCARF1-208ENST00000574545 CDR2LQ86X02 465 aaPredicted RBP21.79■■□□□ 1.08
SCARF1-208ENST00000574545 MRPL43Q8N983 215 aaKnown RBP21.79■■□□□ 1.08
SCARF1-208ENST00000574545 TMEM169Q96HH4 297 aa21.79■■□□□ 1.08
SCARF1-208ENST00000574545 CCDC113Q9H0I3 377 aa21.79■■□□□ 1.08
SCARF1-208ENST00000574545 CD207Q9UJ71 328 aa21.79■■□□□ 1.08
SCARF1-208ENST00000574545 C19orf67A6NJJ6 358 aa21.78■■□□□ 1.08
SCARF1-208ENST00000574545 EDN1P05305 212 aa21.78■■□□□ 1.08
SCARF1-208ENST00000574545 RNASELQ05823 741 aaKnown RBP21.78■■□□□ 1.08
SCARF1-208ENST00000574545 ARL6IP4Q66PJ3 421 aaKnown RBP21.78■■□□□ 1.08
SCARF1-208ENST00000574545 SLC27A1Q6PCB7 646 aa21.78■■□□□ 1.08
SCARF1-208ENST00000574545 DDX53Q86TM3 631 aaKnown RBP21.78■■□□□ 1.08
SCARF1-208ENST00000574545 GJD3Q8N144 294 aa21.78■■□□□ 1.08
SCARF1-208ENST00000574545 SMRP1Q8NCR6 262 aa21.78■■□□□ 1.08
SCARF1-208ENST00000574545 GSTCDQ8NEC7 633 aa21.78■■□□□ 1.08
SCARF1-208ENST00000574545 URGCPQ8TCY9 931 aa21.78■■□□□ 1.08
SCARF1-208ENST00000574545 PNMA5Q96PV4 448 aa21.78■■□□□ 1.08
SCARF1-208ENST00000574545 GAD1Q99259 594 aa21.78■■□□□ 1.08
SCARF1-208ENST00000574545 TMEM175Q9BSA9 504 aa21.78■■□□□ 1.08
SCARF1-208ENST00000574545 VN1R3Q9BXE9 311 aa21.78■■□□□ 1.08
SCARF1-208ENST00000574545 ZBP1Q9H171 429 aa21.78■■□□□ 1.08
SCARF1-208ENST00000574545 C2orf40Q9H1Z8 148 aa21.78■■□□□ 1.08
SCARF1-208ENST00000574545 ENTPD7Q9NQZ7 604 aa21.78■■□□□ 1.08
SCARF1-208ENST00000574545 PRKAG3Q9UGI9 489 aa21.78■■□□□ 1.08
SCARF1-208ENST00000574545 BARX2Q9UMQ3 279 aaPredicted RBP21.78■■□□□ 1.08
SCARF1-208ENST00000574545 DNM3Q9UQ16 869 aa21.78■■□□□ 1.08
SCARF1-208ENST00000574545 FAM50BQ9Y247 325 aa21.78■■□□□ 1.08
SCARF1-208ENST00000574545 GIT1Q9Y2X7 761 aa21.78■■□□□ 1.08
SCARF1-208ENST00000574545 IRAK3Q9Y616 596 aa21.78■■□□□ 1.08
SCARF1-208ENST00000574545 C2orf71A6NGG8 1288 aa21.77■■□□□ 1.08
SCARF1-208ENST00000574545 ARL5CA6NH57 179 aa21.77■■□□□ 1.08
SCARF1-208ENST00000574545 POMCP01189 267 aa21.77■■□□□ 1.08
SCARF1-208ENST00000574545 ZP2Q05996 745 aa21.77■■□□□ 1.08
SCARF1-208ENST00000574545 ZBTB8OSQ8IWT0 167 aa21.77■■□□□ 1.08
SCARF1-208ENST00000574545 DAW1Q8N136 415 aa21.77■■□□□ 1.08
SCARF1-208ENST00000574545 KIFAP3Q92845 792 aa21.77■■□□□ 1.08
SCARF1-208ENST00000574545 GBP3Q9H0R5 595 aa21.77■■□□□ 1.08
SCARF1-208ENST00000574545 NXF3Q9H4D5 531 aaKnown RBP21.77■■□□□ 1.08
SCARF1-208ENST00000574545 FSD2A1L4K1 749 aa21.76■■□□□ 1.07
SCARF1-208ENST00000574545 ACKR2O00590 384 aa21.76■■□□□ 1.07
SCARF1-208ENST00000574545 NRP1O14786 923 aa21.76■■□□□ 1.07
SCARF1-208ENST00000574545 NPTXRO95502 500 aa21.76■■□□□ 1.07
SCARF1-208ENST00000574545 ALDH2P05091 517 aa21.76■■□□□ 1.07
SCARF1-208ENST00000574545 DSC1Q08554 894 aa21.76■■□□□ 1.07
SCARF1-208ENST00000574545 SMC1AQ14683 1233 aaKnown RBP21.76■■□□□ 1.07
SCARF1-208ENST00000574545 PPP2R5AQ15172 486 aa21.76■■□□□ 1.07
SCARF1-208ENST00000574545 RINT1Q6NUQ1 792 aa21.76■■□□□ 1.07
SCARF1-208ENST00000574545 C1orf186Q6ZWK4 172 aa21.76■■□□□ 1.07
SCARF1-208ENST00000574545 COLGALT2Q8IYK4 626 aa21.76■■□□□ 1.07
SCARF1-208ENST00000574545 VPS52Q8N1B4 723 aa21.76■■□□□ 1.07
SCARF1-208ENST00000574545 KCTD17Q8N5Z5 321 aa21.76■■□□□ 1.07
SCARF1-208ENST00000574545 ZFP42Q96MM3 310 aa21.76■■□□□ 1.07
SCARF1-208ENST00000574545 EFEMP2O95967 443 aa21.75■■□□□ 1.07
SCARF1-208ENST00000574545 CTSAP10619 480 aa21.75■■□□□ 1.07
SCARF1-208ENST00000574545 MLH1P40692 756 aa21.75■■□□□ 1.07
SCARF1-208ENST00000574545 MAPK7Q13164 816 aa21.75■■□□□ 1.07
SCARF1-208ENST00000574545 MAPK6Q16659 721 aa21.75■■□□□ 1.07
SCARF1-208ENST00000574545 BRAPQ7Z569 592 aa21.75■■□□□ 1.07
SCARF1-208ENST00000574545 ADHFE1Q8IWW8 467 aa21.75■■□□□ 1.07
SCARF1-208ENST00000574545 KIFC3Q9BVG8 833 aa21.75■■□□□ 1.07
SCARF1-208ENST00000574545 PDZD7Q9H5P4 517 aa21.75■■□□□ 1.07
SCARF1-208ENST00000574545 EPHX3Q9H6B9 360 aa21.75■■□□□ 1.07
SCARF1-208ENST00000574545 USP20Q9Y2K6 914 aa21.75■■□□□ 1.07
SCARF1-208ENST00000574545 FAN1Q9Y2M0 1017 aa21.75■■□□□ 1.07
SCARF1-208ENST00000574545 VWA3AA6NCI4 1184 aa21.74■■□□□ 1.07
SCARF1-208ENST00000574545 CXCL14O95715 111 aa21.74■■□□□ 1.07
SCARF1-208ENST00000574545 PRKCBP05771 671 aa21.74■■□□□ 1.07
SCARF1-208ENST00000574545 AKAP5P24588 427 aa21.74■■□□□ 1.07
SCARF1-208ENST00000574545 SCNN1GP51170 649 aa21.74■■□□□ 1.07
SCARF1-208ENST00000574545 DEPTORQ8TB45 409 aa21.74■■□□□ 1.07
SCARF1-208ENST00000574545 RUSC1Q9BVN2 902 aa21.74■■□□□ 1.07
SCARF1-208ENST00000574545 APOL6Q9BWW8 343 aa21.74■■□□□ 1.07
SCARF1-208ENST00000574545 TRIM6Q9C030 488 aaPredicted RBP21.74■■□□□ 1.07
SCARF1-208ENST00000574545 S1PR5Q9H228 398 aa21.74■■□□□ 1.07
SCARF1-208ENST00000574545 MARCH5Q9NX47 278 aa21.74■■□□□ 1.07
SCARF1-208ENST00000574545 ZMYM2Q9UBW7 1377 aa21.74■■□□□ 1.07
SCARF1-208ENST00000574545 PI4K2BG5E9Z4 385 aa21.73■■□□□ 1.07
SCARF1-208ENST00000574545 LILRB3O75022 631 aa21.73■■□□□ 1.07
SCARF1-208ENST00000574545 CLASP2O75122 1294 aaKnown RBP21.73■■□□□ 1.07
SCARF1-208ENST00000574545 PRPF4BQ13523 1007 aaKnown RBP21.73■■□□□ 1.07
SCARF1-208ENST00000574545 NT5DC1Q5TFE4 455 aa21.73■■□□□ 1.07
SCARF1-208ENST00000574545 ANKRD54Q6NXT1 300 aa21.73■■□□□ 1.07
SCARF1-208ENST00000574545 SYCE2Q6PIF2 218 aa21.73■■□□□ 1.07
SCARF1-208ENST00000574545 AUTS2Q8WXX7 1259 aa21.73■■□□□ 1.07
SCARF1-208ENST00000574545 SUSD6Q92537 303 aa21.73■■□□□ 1.07
SCARF1-208ENST00000574545 INTS4Q96HW7 963 aaKnown RBP21.73■■□□□ 1.07
SCARF1-208ENST00000574545 IFT74Q96LB3 600 aa21.73■■□□□ 1.07
SCARF1-208ENST00000574545 FAM193BQ96PV7 902 aaPredicted RBP21.73■■□□□ 1.07
SCARF1-208ENST00000574545 HCFC2Q9Y5Z7 792 aa21.73■■□□□ 1.07
SCARF1-208ENST00000574545 N4BP3O15049 544 aa21.72■■□□□ 1.07
SCARF1-208ENST00000574545 HIP1RO75146 1068 aa21.72■■□□□ 1.07
SCARF1-208ENST00000574545 GUCY2CP25092 1073 aa21.72■■□□□ 1.07
SCARF1-208ENST00000574545 NPTX2P47972 431 aa21.72■■□□□ 1.07
SCARF1-208ENST00000574545 EFNA5P52803 228 aa21.72■■□□□ 1.07
SCARF1-208ENST00000574545 TMEM119Q4V9L6 283 aa21.72■■□□□ 1.07
SCARF1-208ENST00000574545 EEF1DP3Q658K8 133 aa21.72■■□□□ 1.07
SCARF1-208ENST00000574545 HACE1Q8IYU2 909 aa21.72■■□□□ 1.07
SCARF1-208ENST00000574545 RNF168Q8IYW5 571 aaPredicted RBP21.72■■□□□ 1.07
SCARF1-208ENST00000574545 SYT2Q8N9I0 419 aaPredicted RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms