RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 ERLIN2O94905 339 aa13.36□□□□□ -0.27
CTNS-208ENST00000574218 SPATA31D3P0C874 917 aa13.36□□□□□ -0.27
CTNS-208ENST00000574218 CDC27P30260 824 aa13.36□□□□□ -0.27
CTNS-208ENST00000574218 USP11P51784 963 aa13.36□□□□□ -0.27
CTNS-208ENST00000574218 CREMQ03060 361 aa13.36□□□□□ -0.27
CTNS-208ENST00000574218 NCBP1Q09161 790 aaKnown RBP13.36□□□□□ -0.27
CTNS-208ENST00000574218 VARS2Q5ST30 1063 aaKnown RBP13.36□□□□□ -0.27
CTNS-208ENST00000574218 KIAA0319Q5VV43 1072 aa13.36□□□□□ -0.27
CTNS-208ENST00000574218 SPATA31D4Q6ZUB0 917 aa13.36□□□□□ -0.27
CTNS-208ENST00000574218 MRPL10Q7Z7H8 261 aaKnown RBP13.36□□□□□ -0.27
CTNS-208ENST00000574218 KSR1Q8IVT5 923 aa13.36□□□□□ -0.27
CTNS-208ENST00000574218 HACE1Q8IYU2 909 aa13.36□□□□□ -0.27
CTNS-208ENST00000574218 SLC7A3Q8WY07 619 aa13.36□□□□□ -0.27
CTNS-208ENST00000574218 SH2D3AQ9BRG2 576 aa13.36□□□□□ -0.27
CTNS-208ENST00000574218 COLEC11Q9BWP8 271 aa13.36□□□□□ -0.27
CTNS-208ENST00000574218 RXFP1Q9HBX9 757 aa13.36□□□□□ -0.27
CTNS-208ENST00000574218 CDV3Q9UKY7 258 aaKnown RBP13.36□□□□□ -0.27
CTNS-208ENST00000574218 COL4A3BPQ9Y5P4 624 aa13.36□□□□□ -0.27
CTNS-208ENST00000574218 NUMBLQ9Y6R0 609 aa13.36□□□□□ -0.27
CTNS-208ENST00000574218 SPTBN2O15020 2390 aa13.36□□□□□ -0.27
CTNS-208ENST00000574218 RALGAPA1Q6GYQ0 2036 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 TMEM150BA6NC51 233 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 PRR5-ARHGAP8B1AHC4 643 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 SRGAP2CP0DJJ0 459 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 NCLP19338 710 aaKnown RBP13.35□□□□□ -0.27
CTNS-208ENST00000574218 FSHRP23945 695 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 ADD1P35611 737 aaKnown RBP13.35□□□□□ -0.27
CTNS-208ENST00000574218 MAGEA9P43362 315 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 ARHGAP8P85298 464 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 DSG1Q02413 1049 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 HTR4Q13639 388 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 KRT32Q14532 448 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 UBXN2BQ14CS0 331 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 ZNF528Q3MIS6 628 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 MTSS1LQ765P7 747 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 SRGAP1Q7Z6B7 1085 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 GLYCTKQ8IVS8 523 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 PSPC1Q8WXF1 523 aaKnown RBP13.35□□□□□ -0.27
CTNS-208ENST00000574218 C22orf23Q9BZE7 217 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 PRKD2Q9BZL6 878 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 NT5C3AQ9H0P0 336 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 MARCH5Q9NX47 278 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 DLGAP2Q9P1A6 1054 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 FBXO4Q9UKT5 387 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 ACACBO00763 2458 aa13.35□□□□□ -0.27
CTNS-208ENST00000574218 KANSL1LA0AUZ9 987 aa13.34□□□□□ -0.27
CTNS-208ENST00000574218 ANHXE9PGG2 379 aa13.34□□□□□ -0.27
CTNS-208ENST00000574218 PRPF3O43395 683 aaKnown RBP13.34□□□□□ -0.27
CTNS-208ENST00000574218 KRT37O76014 449 aa13.34□□□□□ -0.27
CTNS-208ENST00000574218 C1RP00736 705 aa13.34□□□□□ -0.27
CTNS-208ENST00000574218 HMGB1P09429 215 aaKnown RBP13.34□□□□□ -0.27
CTNS-208ENST00000574218 STARD6P59095 220 aa13.34□□□□□ -0.27
CTNS-208ENST00000574218 PSMC5P62195 406 aa13.34□□□□□ -0.27
CTNS-208ENST00000574218 EXOSC10Q01780 885 aaKnown RBP13.34□□□□□ -0.27
CTNS-208ENST00000574218 PFKPQ01813 784 aa13.34□□□□□ -0.27
CTNS-208ENST00000574218 LMNB2Q03252 620 aa13.34□□□□□ -0.27
CTNS-208ENST00000574218 PRKCQQ04759 706 aa13.34□□□□□ -0.27
CTNS-208ENST00000574218 CSTF1Q05048 431 aaKnown RBP13.34□□□□□ -0.27
CTNS-208ENST00000574218 USP41Q3LFD5 358 aa13.34□□□□□ -0.27
CTNS-208ENST00000574218 LIN9Q5TKA1 542 aa13.34□□□□□ -0.27
CTNS-208ENST00000574218 TAS1R1Q7RTX1 841 aa13.34□□□□□ -0.27
CTNS-208ENST00000574218 COLGALT2Q8IYK4 626 aa13.34□□□□□ -0.27
CTNS-208ENST00000574218 SUMF1Q8NBK3 374 aa13.34□□□□□ -0.27
CTNS-208ENST00000574218 TCP11Q8WWU5 503 aa13.34□□□□□ -0.27
CTNS-208ENST00000574218 ZNF707Q96C28 371 aaPredicted RBP13.34□□□□□ -0.27
CTNS-208ENST00000574218 TRIM6Q9C030 488 aaPredicted RBP13.34□□□□□ -0.27
CTNS-208ENST00000574218 FAM217BQ9NTX9 383 aaPredicted RBP13.34□□□□□ -0.27
CTNS-208ENST00000574218 USP18Q9UMW8 372 aa13.34□□□□□ -0.27
CTNS-208ENST00000574218 PCDHGA2Q9Y5H1 932 aa13.34□□□□□ -0.27
CTNS-208ENST00000574218 POTEMA6NI47 508 aa13.33□□□□□ -0.28
CTNS-208ENST00000574218 ADAMTS3O15072 1205 aa13.33□□□□□ -0.28
CTNS-208ENST00000574218 NCAM2O15394 837 aa13.33□□□□□ -0.28
CTNS-208ENST00000574218 TGM5O43548 720 aa13.33□□□□□ -0.28
CTNS-208ENST00000574218 PSMD10O75832 226 aa13.33□□□□□ -0.28
CTNS-208ENST00000574218 AFF1P51825 1210 aaKnown RBP13.33□□□□□ -0.28
CTNS-208ENST00000574218 NLRP5P59047 1200 aa13.33□□□□□ -0.28
CTNS-208ENST00000574218 SNW1Q13573 536 aaKnown RBP13.33□□□□□ -0.28
CTNS-208ENST00000574218 MLF2Q15773 248 aaPredicted RBP13.33□□□□□ -0.28
CTNS-208ENST00000574218 Q4G0T1 1027 aa13.33□□□□□ -0.28
CTNS-208ENST00000574218 PLA2G4FQ68DD2 849 aa13.33□□□□□ -0.28
CTNS-208ENST00000574218 POTEGQ6S5H5 508 aa13.33□□□□□ -0.28
CTNS-208ENST00000574218 CCDC51Q96ER9 411 aa13.33□□□□□ -0.28
CTNS-208ENST00000574218 CEP170P1Q96L14 293 aa13.33□□□□□ -0.28
CTNS-208ENST00000574218 GAD1Q99259 594 aa13.33□□□□□ -0.28
CTNS-208ENST00000574218 APOL6Q9BWW8 343 aa13.33□□□□□ -0.28
CTNS-208ENST00000574218 SLKQ9H2G2 1235 aaPredicted RBP13.33□□□□□ -0.28
CTNS-208ENST00000574218 IFT122Q9HBG6 1241 aa13.33□□□□□ -0.28
CTNS-208ENST00000574218 FNIP2Q9P278 1114 aa13.33□□□□□ -0.28
CTNS-208ENST00000574218 GMEB2Q9UKD1 530 aa13.33□□□□□ -0.28
CTNS-208ENST00000574218 SMG5Q9UPR3 1016 aaKnown RBP13.33□□□□□ -0.28
CTNS-208ENST00000574218 PPME1Q9Y570 386 aa13.33□□□□□ -0.28
CTNS-208ENST00000574218 KMT2BQ9UMN6 2715 aaPredicted RBP13.32□□□□□ -0.28
CTNS-208ENST00000574218 ARL5CA6NH57 179 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 ASAP2O43150 1006 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 LRRN2O75325 713 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 ZMYND10O75800 440 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 GLULP15104 373 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 AXLP30530 894 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 MLH1P40692 756 aa13.32□□□□□ -0.28
CTNS-208ENST00000574218 RFC5P40937 340 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms